Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.6e-60 235.7 172 100.0
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.6e-60 235.7 172 100.0
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 1.1e-37 160.6 116 80.2
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 9.0e-37 157.5 115 78.3
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.6e-36 156.0 147 76.2
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.0e-35 154.1 115 80.0
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.7e-35 153.3 116 81.9
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.2e-35 152.9 115 79.1
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 3.8e-35 152.1 115 79.1
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 8.4e-35 151.0 115 78.3
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 3.2e-34 149.1 115 77.4
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 5.5e-34 148.3 82 86.6
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 7.1e-34 147.9 155 71.6
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 9.3e-34 147.5 82 85.4
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.2e-33 147.1 82 85.4
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.2e-33 147.1 82 84.1
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.2e-33 147.1 82 84.1
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.2e-33 147.1 112 80.4
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 2.7e-33 146.0 82 82.9
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 3.5e-33 145.6 84 81.0
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.6e-33 145.2 82 82.9
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 6.0e-33 144.8 115 78.3
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 6.0e-33 144.8 82 84.1
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 7.9e-33 144.4 82 85.4
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.3e-32 143.7 116 72.4
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.3e-32 143.7 82 82.9
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.8e-32 143.3 82 82.9
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 2.3e-32 142.9 115 77.4
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.3e-32 142.9 84 81.0
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.3e-32 142.9 82 82.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.0e-32 142.5 115 74.8
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 5.1e-32 141.7 82 81.7
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 8.7e-32 141.0 84 79.8
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 8.7e-32 141.0 84 79.8
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.1e-31 140.6 82 81.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.9e-31 139.8 84 78.6
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.9e-31 139.8 84 78.6
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 2.5e-31 139.4 116 71.6
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 3.3e-31 139.0 82 80.5
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 3.3e-31 139.0 82 79.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.3e-31 139.0 82 79.3
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 4.3e-31 138.7 115 73.9
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 7.4e-31 137.9 115 74.8
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 2.8e-30 136.0 82 75.6
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 2.8e-30 136.0 84 76.2
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 4.8e-30 135.2 117 74.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 4.8e-30 135.2 79 79.7
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 4.8e-30 135.2 84 77.4
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 6.3e-30 134.8 151 68.9
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 6.3e-30 134.8 115 73.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 8.2e-30 134.4 115 74.8
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 8.2e-30 134.4 115 74.8
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 8.2e-30 134.4 115 74.8
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 8.2e-30 134.4 115 74.8
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 8.2e-30 134.4 84 76.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 8.2e-30 134.4 77 81.8
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.4e-29 133.7 115 73.9
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 3.1e-29 132.5 75 82.7
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.1e-29 132.5 82 78.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 4.1e-29 132.1 84 75.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 6.9e-29 131.3 84 75.0
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.0e-28 129.8 84 75.0
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.6e-28 129.4 79 79.7
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.6e-28 129.4 84 73.8
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 2.6e-28 129.4 75 80.0
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 2.6e-28 129.4 75 80.0
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 3.4e-28 129.0 82 74.4
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 5.9e-28 128.3 74 79.7
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.3e-27 127.1 74 79.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.3e-27 127.1 79 75.9
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.7e-27 126.7 84 73.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.1e-26 124.0 84 73.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 5.5e-26 121.7 80 72.5
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 2.1e-25 119.8 121 52.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.7e-25 119.4 74 77.0
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.0e-24 117.5 81 66.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.8e-24 116.7 79 67.1
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 5.7e-23 111.7 105 70.5
CSS0036326 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.7e-22 110.2 170 44.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 2.9e-19 99.4 82 59.8
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 5.5e-18 95.1 73 58.9
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.6e-17 93.6 66 65.2
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.0e-16 90.9 54 85.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.1e-15 87.4 53 84.9
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.1e-15 87.4 71 54.9
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.8e-14 82.8 115 52.2
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 3.0e-08 62.8 42 71.4
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.5e-07 60.5 42 69.0


User provided reference genes

Program Settings