Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.4e-51 205.3 108 100.0
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.3e-48 193.4 100 100.0
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.1e-37 159.8 100 79.0
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 2.2e-36 155.6 100 78.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 6.3e-36 154.1 100 77.0
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.8e-35 152.5 97 77.3
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 3.4e-34 148.3 96 77.1
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.9e-33 145.2 97 76.3
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 5.0e-33 144.4 97 72.2
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 6.5e-33 144.1 96 72.9
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 6.5e-33 144.1 97 73.2
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.1e-32 143.3 94 73.4
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.9e-32 142.5 94 72.3
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.5e-32 142.1 94 76.6
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 3.2e-32 141.7 102 64.7
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 7.2e-32 140.6 98 67.3
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 9.3e-32 140.2 96 68.8
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 9.3e-32 140.2 93 74.2
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.6e-31 139.4 94 75.5
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.7e-31 138.7 96 69.8
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 4.6e-31 137.9 96 67.7
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 4.6e-31 137.9 96 67.7
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 7.9e-31 137.1 97 66.0
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.8e-30 136.0 92 72.8
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.8e-30 136.0 92 72.8
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.8e-30 136.0 96 66.7
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 1.8e-30 136.0 92 72.8
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 2.3e-30 135.6 94 69.1
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.0e-30 135.2 98 71.4
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 3.0e-30 135.2 94 70.2
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 3.9e-30 134.8 100 67.0
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 6.7e-30 134.0 97 66.0
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.9e-29 132.5 94 70.2
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 1.9e-29 132.5 94 70.2
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 1.9e-29 132.5 94 68.1
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 3.3e-29 131.7 96 68.8
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 7.4e-29 130.6 94 67.0
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 9.7e-29 130.2 97 62.9
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.3e-28 129.8 100 62.0
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.7e-28 129.4 96 62.5
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.7e-28 129.4 93 71.0
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 2.2e-28 129.0 96 63.5
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.8e-28 128.6 94 68.1
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.8e-28 128.6 96 63.5
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 4.8e-28 127.9 93 69.9
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 4.8e-28 127.9 92 71.7
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.3e-28 127.5 94 66.0
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.3e-28 127.5 94 66.0
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 6.3e-28 127.5 97 64.9
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 8.2e-28 127.1 97 63.9
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 8.2e-28 127.1 94 67.0
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.8e-27 125.9 92 64.1
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.8e-27 125.9 96 65.6
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 3.1e-27 125.2 92 64.1
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 5.3e-27 124.4 96 63.5
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 5.3e-27 124.4 96 60.4
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.3e-27 124.4 96 61.5
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 6.9e-27 124.0 96 62.5
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.2e-26 123.2 94 64.9
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-26 123.2 96 62.5
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.2e-26 123.2 94 59.6
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.5e-26 122.9 96 64.6
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 1.5e-26 122.9 96 62.5
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.0e-26 122.5 98 63.3
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.0e-26 122.5 93 64.5
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 2.6e-26 122.1 93 64.5
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 2.6e-26 122.1 93 65.6
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 3.4e-26 121.7 96 61.5
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 3.4e-26 121.7 96 58.3
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.4e-26 121.7 100 57.0
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 4.5e-26 121.3 94 62.8
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 4.5e-26 121.3 93 64.5
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.5e-26 121.3 93 64.5
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 5.9e-26 120.9 93 65.6
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 7.7e-26 120.6 93 64.5
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 7.7e-26 120.6 93 64.5
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.3e-25 119.8 92 63.0
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.3e-25 119.8 92 63.0
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.3e-25 119.8 92 63.0
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.3e-25 119.8 96 57.3
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.3e-25 119.8 87 66.7
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.3e-25 119.8 92 64.1
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.7e-25 119.4 92 66.3
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.7e-25 119.4 92 63.0
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 2.2e-25 119.0 92 64.1
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.9e-25 118.6 99 58.6
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 2.9e-25 118.6 100 60.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.8e-25 118.2 94 61.7
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 5.0e-25 117.9 93 59.1
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 5.0e-25 117.9 94 57.4
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.1e-24 116.7 96 59.4
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 3.2e-24 115.2 92 60.9
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 7.2e-24 114.0 92 59.8
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.2e-23 113.2 93 60.2
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 2.7e-23 112.1 92 57.6
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.6e-23 111.7 90 62.2
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.6e-23 111.7 96 55.2
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.8e-22 109.4 92 57.6
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 2.3e-22 109.0 93 58.1
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.3e-22 109.0 94 55.3
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 5.1e-22 107.8 77 67.5
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 5.1e-22 107.8 77 67.5
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 6.7e-22 107.5 123 49.6
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.6e-21 105.5 102 54.9
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 9.7e-21 103.6 95 51.6
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 3.7e-20 101.7 92 52.2
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.1e-19 100.1 70 71.4
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.4e-19 99.8 74 68.9
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 5.3e-19 97.8 77 62.3
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 9.1e-19 97.1 90 56.7
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 2.6e-18 95.5 69 66.7
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.9e-18 94.4 94 47.9
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 7.7e-18 94.0 100 46.0
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 7.7e-18 94.0 94 51.1
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 5.0e-17 91.3 101 52.5
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 8.8e-14 80.5 91 41.8
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 5.7e-13 77.8 74 52.7
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 3.7e-12 75.1 53 64.2


User provided reference genes

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