Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017244 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 7.3e-78 293.9 156 100.0
CSS0033661 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 3.4e-75 285.0 161 95.7
Actinidia19346 Actinidia chinensis HOM05D003444 ORTHO05D003963 3.6e-61 238.4 156 85.3
Cc04_g12590 Coffea canephora HOM05D003444 ORTHO05D003963 2.1e-56 222.6 141 81.6
Dinv38555 Davidia involucrata HOM05D003444 ORTHO05D003963 7.9e-56 220.7 156 80.1
Rhsim08G0175500 Rhododendron simsii HOM05D003444 ORTHO05D003963 1.8e-55 219.5 171 75.4
PGR083G1868 Punica granatum HOM05D003444 ORTHO05D003963 2.8e-53 212.2 154 75.3
Peaxi162Scf00089g01529 Petunia axillaris HOM05D003444 ORTHO05D003963 6.2e-53 211.1 156 75.0
vmacro19322 Vaccinium macrocarpon HOM05D003444 ORTHO05D003963 3.1e-52 208.8 186 68.3
MSTRG.23156 Avicennia marina HOM05D003444 ORTHO05D003963 5.3e-52 208.0 156 71.8
Glyma.17G086600 Glycine max HOM05D003444 ORTHO05D003963 9.0e-52 207.2 142 76.8
Oeu046785.1 Olea europaea HOM05D003444 ORTHO05D003963 9.0e-52 207.2 136 79.4
Ca_16152_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 3.4e-51 205.3 141 75.2
Lj5A128T62 Lonicera japonica HOM05D003444 ORTHO05D003963 3.4e-51 205.3 131 83.2
GSVIVG01007683001 Vitis vinifera HOM05D003444 ORTHO05D003963 3.4e-51 205.3 141 78.0
Manes.14G062700 Manihot esculenta HOM05D003444 ORTHO05D003963 5.8e-51 204.5 154 75.3
Lsat_1_v5_gn_1_28101 Lactuca sativa HOM05D003444 ORTHO05D003963 2.2e-50 202.6 157 70.7
ECA247G0281 Erigeron canadensis HOM05D003444 ORTHO05D003963 4.9e-50 201.4 138 76.1
VMungo1309G2319 Vigna mungo HOM05D003444 ORTHO05D003963 8.4e-50 200.7 141 75.2
HanXRQChr02g0035691 Helianthus annuus HOM05D003444 ORTHO05D003963 1.4e-49 199.9 143 73.4
TAR629G1253 Trochodendron aralioides HOM05D003444 ORTHO05D003963 1.4e-49 199.9 141 75.9
HanXRQChr16g0504631 Helianthus annuus HOM05D003444 ORTHO05D003963 1.9e-49 199.5 144 77.1
Nn4g22663 Nelumbo nucifera HOM05D003444 ORTHO05D003963 2.4e-49 199.1 141 75.9
arahy.Tifrunner.gnm1.ann1.NDZJ5A Arachis hypogaea HOM05D003444 ORTHO05D003963 4.2e-49 198.4 139 73.4
Phvul.002G107400 Phaseolus vulgaris HOM05D003444 ORTHO05D003963 5.5e-49 198.0 141 73.8
Prupe.5G169400 Prunus persica HOM05D003444 ORTHO05D003963 7.1e-49 197.6 138 73.9
Thecc.03G023900 Theobroma cacao HOM05D003444 ORTHO05D003963 7.1e-49 197.6 137 76.6
Cpa.g.sc35.80 Carica papaya HOM05D003444 ORTHO05D003963 9.3e-49 197.2 134 76.1
SGA_v2.0_scaffold25G10811 Striga asiatica HOM05D003444 ORTHO05D003963 9.3e-49 197.2 156 67.9
CAN.G338.8 Capsicum annuum HOM05D003444 ORTHO05D003963 1.2e-48 196.8 152 71.7
Lalb_Chr08g0236641 Lupinus albus HOM05D003444 ORTHO05D003963 2.7e-48 195.7 141 74.5
TPR.G31058 Trifolium pratense HOM05D003444 ORTHO05D003963 2.7e-48 195.7 141 70.9
Potri.002G197600 Populus trichocarpa HOM05D003444 ORTHO05D003963 3.5e-48 195.3 137 75.9
arahy.Tifrunner.gnm1.ann1.GAE861 Arachis hypogaea HOM05D003444 ORTHO05D003963 4.6e-48 194.9 139 72.7
Lalb_Chr12g0201761 Lupinus albus HOM05D003444 ORTHO05D003963 4.6e-48 194.9 141 71.6
Lj4g0001447 Lotus japonicus HOM05D003444 ORTHO05D003963 7.9e-48 194.1 139 72.7
CANSAT80G2021 Cannabis sativa HOM05D003444 ORTHO05D003963 1.0e-47 193.7 140 74.3
TPR.G37557 Trifolium pratense HOM05D003444 ORTHO05D003963 1.0e-47 193.7 138 71.0
Gorai.001G071300 Gossypium raimondii HOM05D003444 ORTHO05D003963 3.0e-47 192.2 138 75.4
Haze_07554 Corylus avellana HOM05D003444 ORTHO05D003963 3.9e-47 191.8 141 70.9
PSO478G2857 Papaver somniferum HOM05D003444 ORTHO05D003963 5.1e-47 191.4 152 68.4
TAR374G1632 Trochodendron aralioides HOM05D003444 ORTHO05D003963 5.1e-47 191.4 141 72.3
Migut.G00959 Erythranthe guttata HOM05D003444 ORTHO05D003963 6.7e-47 191.0 144 70.8
Gohir.A07G063100 Gossypium hirsutum HOM05D003444 ORTHO05D003963 6.7e-47 191.0 138 75.4
Gohir.D07G067800 Gossypium hirsutum HOM05D003444 ORTHO05D003963 1.1e-46 190.3 138 75.4
SGA_v2.0_scaffold90G27874 Striga asiatica HOM05D003444 ORTHO05D003963 1.1e-46 190.3 156 66.7
Duzib205G1696 Durio zibethinus HOM05D003444 ORTHO05D003963 1.5e-46 189.9 137 75.2
QL10p008500 Quercus lobata HOM05D003444 ORTHO05D003963 1.5e-46 189.9 150 68.0
QL10p008629 Quercus lobata HOM05D003444 ORTHO05D003963 1.5e-46 189.9 150 68.0
CiPaw.11G022500 Carya illinoinensis HOM05D003444 ORTHO05D003963 1.9e-46 189.5 144 70.8
CiPaw.12G029000 Carya illinoinensis HOM05D003444 ORTHO05D003963 4.3e-46 188.3 141 70.9
Aqoxy3G01091 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 5.6e-46 188.0 145 70.3
Eucgr.B03880 Eucalyptus grandis HOM05D003444 ORTHO05D003963 5.6e-46 188.0 144 70.8
PSO017G6313 Papaver somniferum HOM05D003444 ORTHO05D003963 5.6e-46 188.0 152 67.8
MD06G1169900 Malus domestica HOM05D003444 ORTHO05D003963 7.4e-46 187.6 153 65.4
Solyc03g112520.3 Solanum lycopersicum HOM05D003444 ORTHO05D003963 7.4e-46 187.6 155 67.7
Ca_21949_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 9.6e-46 187.2 127 75.6
EL10Ac5g10690 Beta vulgaris HOM05D003444 ORTHO05D003963 1.3e-45 186.8 160 65.6
AUR62008171 Chenopodium quinoa HOM05D003444 ORTHO05D003963 1.3e-45 186.8 128 75.0
AUR62028748 Chenopodium quinoa HOM05D003444 ORTHO05D003963 1.3e-45 186.8 128 75.0
COL.COLO4_30111 Corchorus olitorius HOM05D003444 ORTHO05D003963 2.1e-45 186.0 143 71.3
Eucgr.B00240 Eucalyptus grandis HOM05D003444 ORTHO05D003963 2.1e-45 186.0 123 78.9
Hund09457 Selenicereus undatus HOM05D003444 ORTHO05D003963 2.1e-45 186.0 139 71.2
Duzib068G1143 Durio zibethinus HOM05D003444 ORTHO05D003963 2.8e-45 185.7 135 74.1
FvH4_5g05840 Fragaria vesca HOM05D003444 ORTHO05D003963 4.8e-45 184.9 136 71.3
FAN18G3108 Fragaria x ananassa HOM05D003444 ORTHO05D003963 4.8e-45 184.9 136 71.3
Nitab4.5_0001647g0010 Nicotiana tabacum HOM05D003444 ORTHO05D003963 4.8e-45 184.9 155 67.1
FAN08G2080 Fragaria x ananassa HOM05D003444 ORTHO05D003963 6.2e-45 184.5 136 71.3
Glyma.06G179400 Glycine max HOM05D003444 ORTHO05D003963 6.2e-45 184.5 115 81.7
Migut.O00133 Erythranthe guttata HOM05D003444 ORTHO05D003963 8.2e-45 184.1 146 67.8
FAN04G2640 Fragaria x ananassa HOM05D003444 ORTHO05D003963 8.2e-45 184.1 136 71.3
Ah.11g051380 Amaranthus hybridus HOM05D003444 ORTHO05D003963 1.8e-44 183.0 128 73.4
arahy.Tifrunner.gnm1.ann1.N3JE1D Arachis hypogaea HOM05D003444 ORTHO05D003963 1.8e-44 183.0 142 66.2
RcHm_v2.0_Chr7g0192981 Rosa chinensis HOM05D003444 ORTHO05D003963 3.1e-44 182.2 136 69.1
arahy.Tifrunner.gnm1.ann1.V3MNVK Arachis hypogaea HOM05D003444 ORTHO05D003963 4.0e-44 181.8 142 65.5
Manes.06G108200 Manihot esculenta HOM05D003444 ORTHO05D003963 4.0e-44 181.8 154 69.5
CARHR082370 Cardamine hirsuta HOM05D003444 ORTHO05D003963 5.3e-44 181.4 141 71.6
Sed0021330 Sechium edule HOM05D003444 ORTHO05D003963 9.0e-44 180.6 156 64.7
Sopen03g031580 Solanum pennellii HOM05D003444 ORTHO05D003963 9.0e-44 180.6 104 87.5
PGSC0003DMG400018108 Solanum tuberosum HOM05D003444 ORTHO05D003963 1.2e-43 180.3 154 66.2
Aqoxy3G02821 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 2.0e-43 179.5 120 77.5
Glyma.04G186400 Glycine max HOM05D003444 ORTHO05D003963 3.4e-43 178.7 108 83.3
Zm00001eb209200 Zea mays HOM05D003444 ORTHO05D003963 3.4e-43 178.7 154 63.0
Aqoxy1G03753 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 4.5e-43 178.3 117 78.6
MBI10_g32035_MAGBIO Magnolia biondii HOM05D003444 ORTHO05D003963 4.5e-43 178.3 137 70.1
arahy.Tifrunner.gnm1.ann1.T862AX Arachis hypogaea HOM05D003444 ORTHO05D003963 5.8e-43 177.9 142 64.8
ClCG09G013270 Citrullus lanatus HOM05D003444 ORTHO05D003963 5.8e-43 177.9 122 75.4
SalBow5G0548 Salvia bowleyana HOM05D003444 ORTHO05D003963 5.8e-43 177.9 110 80.9
TPR.G7254 Trifolium pratense HOM05D003444 ORTHO05D003963 5.8e-43 177.9 127 70.1
Sp5g08230 Schrenkiella parvula HOM05D003444 ORTHO05D003963 1.3e-42 176.8 148 66.2
THA.LOC104809841 Tarenaya hassleriana HOM05D003444 ORTHO05D003963 1.3e-42 176.8 147 67.3
Psat4g060120 Pisum sativum HOM05D003444 ORTHO05D003963 1.7e-42 176.4 139 64.7
arahy.Tifrunner.gnm1.ann1.P2M8BS Arachis hypogaea HOM05D003444 ORTHO05D003963 2.2e-42 176.0 147 63.3
ATR1152G109 Amborella trichopoda HOM05D003444 ORTHO05D003963 3.8e-42 175.3 138 65.9
Carub.0005s2076 Capsella rubella HOM05D003444 ORTHO05D003963 8.4e-42 174.1 149 67.8
Thhalv10010523m.g Eutrema salsugineum HOM05D003444 ORTHO05D003963 8.4e-42 174.1 148 66.9
Os06g0474200 Oryza sativa ssp. japonica HOM05D003444 ORTHO05D003963 8.4e-42 174.1 142 66.9
Zm00001eb231610 Zea mays HOM05D003444 ORTHO05D003963 8.4e-42 174.1 153 62.7
Ciclev10020974m.g Citrus clementina HOM05D003444 ORTHO05D003963 1.4e-41 173.3 141 63.1
CDE05G0978 Ceratophyllum demersum HOM05D003444 ORTHO05D003963 1.9e-41 172.9 141 64.5
MELO3C026275.2 Cucumis melo HOM05D003444 ORTHO05D003963 1.9e-41 172.9 137 67.2
Dinv20618 Davidia involucrata HOM05D003444 ORTHO05D003963 1.9e-41 172.9 102 85.3
CsaV3_1G001270 Cucumis sativus L. HOM05D003444 ORTHO05D003963 2.5e-41 172.6 142 66.9
DCAR_026161 Daucus carota HOM05D003444 ORTHO05D003963 2.5e-41 172.6 144 68.1
Medtr3g077320 Medicago truncatula HOM05D003444 ORTHO05D003963 3.2e-41 172.2 129 70.5
C08p29430 Brassica napus HOM05D003444 ORTHO05D003963 4.2e-41 171.8 145 62.8
BolC8t50544H Brassica oleracea HOM05D003444 ORTHO05D003963 4.2e-41 171.8 145 62.8
Aa31sc491G40 Aethionema arabicum HOM05D003444 ORTHO05D003963 7.1e-41 171.0 107 82.2
TWI79G0312 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 7.1e-41 171.0 139 64.0
Sc12g0005160 Simmondsia chinensis HOM05D003444 ORTHO05D003963 1.2e-40 170.2 125 70.4
CDE11G0533 Ceratophyllum demersum HOM05D003444 ORTHO05D003963 1.6e-40 169.9 142 63.4
A09p47170 Brassica napus HOM05D003444 ORTHO05D003963 2.7e-40 169.1 145 62.1
Cfa019176 Carpinus fangiana HOM05D003444 ORTHO05D003963 4.6e-40 168.3 124 71.8
SGA_v2.0_scaffold90G27871 Striga asiatica HOM05D003444 ORTHO05D003963 4.6e-40 168.3 120 72.5
BraA09t40179Z Brassica rapa HOM05D003444 ORTHO05D003963 6.0e-40 167.9 146 62.3
BcaB01g00212 Brassica carinata HOM05D003444 ORTHO05D003963 1.3e-39 166.8 150 60.7
Lj1g0020971 Lotus japonicus HOM05D003444 ORTHO05D003963 1.8e-39 166.4 100 86.0
AT3G54170 Arabidopsis thaliana HOM05D003444 ORTHO05D003963 3.9e-39 165.2 106 81.1
unitig_8.g3056 Utricularia gibba HOM05D003444 ORTHO05D003963 5.1e-39 164.9 136 64.7
BcaC08g44673 Brassica carinata HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
BcaNung05459 Brassica carinata HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
A07p22020 Brassica napus HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
C06p22000 Brassica napus HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
BolC6t37388H Brassica oleracea HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
BraA07t29885Z Brassica rapa HOM05D003444 ORTHO05D003963 8.7e-39 164.1 141 64.5
Glyma.05G040200 Glycine max HOM05D003444 ORTHO05D003963 1.1e-38 163.7 99 82.8
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 1.5e-38 163.3 128 68.0
AL5G35210 Arabidopsis lyrata HOM05D003444 ORTHO05D003963 1.9e-38 162.9 107 78.5
BcaB02g07746 Brassica carinata HOM05D003444 ORTHO05D003963 3.3e-38 162.2 142 64.1
TWI75G1457 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 7.4e-38 161.0 137 63.5
COL.COLO4_30123 Corchorus olitorius HOM05D003444 ORTHO05D003963 2.2e-37 159.5 153 62.7
Nitab4.5_0001284g0080 Nicotiana tabacum HOM05D003444 ORTHO05D003963 1.1e-36 157.1 155 60.6
Nitab4.5_0010304g0010 Nicotiana tabacum HOM05D006400 ORTHO05D008039 1.2e-35 153.7 153 60.1
HPP92_013532 Vanilla planifolia HOM05D003444 ORTHO05D003963 2.0e-35 152.9 141 58.9
arahy.Tifrunner.gnm1.ann1.9FBM9V Arachis hypogaea HOM05D003444 ORTHO05D003963 1.3e-34 150.2 138 60.1
Hma1.2p1_0046F.1_g026870 Hydrangea macrophylla HOM05D003444 ORTHO05D003963 9.4e-33 144.1 80 91.2
CSS0046637 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 1.2e-32 143.7 77 94.8
arahy.Tifrunner.gnm1.ann1.BAEJ4E Arachis hypogaea HOM05D003444 ORTHO05D003963 4.6e-32 141.7 201 44.8
SEGI_34823 Sequoiadendron giganteum HOM05D003444 ORTHO05D003963 3.3e-30 135.6 130 56.9
Psat0s2597g0040 Pisum sativum HOM05D003444 ORTHO05D003963 5.7e-30 134.8 80 83.8
AagrBONN_evm.TU.Sc2ySwM_362.1384 Anthoceros agrestis HOM05D003444 ORTHO05D003963 1.4e-25 120.2 122 56.6
Mapoly0061s0094 Marchantia polymorpha HOM05D003444 ORTHO05D003963 1.4e-25 120.2 109 56.0
Pp3c8_10480 Physcomitrium patens HOM05D003444 ORTHO05D003963 5.5e-25 118.2 125 51.2
Sed0013109 Sechium edule HOM05D003444 ORTHO05D003963 3.0e-23 112.5 111 56.8
SMO270G0025 Selaginella moellendorffii HOM05D003444 ORTHO05D003963 3.0e-23 112.5 110 54.5
CSS0007999 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 1.5e-22 110.2 97 70.1
ClCG06G017220 Citrullus lanatus HOM05D003444 ORTHO05D003963 7.0e-20 101.3 139 48.2
Actinidia33091 Actinidia chinensis HOM05D003444 ORTHO05D003963 7.2e-17 91.3 124 51.6
SHI35645 Sapria himalayana HOM05D003444 ORTHO05D003963 4.7e-16 88.6 56 80.4
CBR_g57069 Chara braunii HOM05D003444 ORTHO05D003963 1.5e-14 83.6 117 38.5
Prupe.5G168700 Prunus persica HOM05D003444 ORTHO05D003963 4.4e-14 82.0 51 80.4
Lsat_1_v5_gn_4_76300 Lactuca sativa HOM05D003444 ORTHO05D003963 2.2e-13 79.7 45 82.2
Sc12g0005130 Simmondsia chinensis HOM05D003444 ORTHO05D003963 2.2e-13 79.7 59 67.8
CBR_g23963 Chara braunii HOM05D003444 ORTHO05D003963 7.0e-12 74.7 149 28.9
HanXRQChr01g0018841 Helianthus annuus HOM05D003444 ORTHO05D003963 6.1e-08 61.6 63 50.8
CSS0023591 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 9.7e-06 54.3 61 62.3


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