Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.5e-65 250.8 121 100.0
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.0e-56 220.3 120 87.5
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.8e-55 216.9 120 87.5
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.7e-54 214.2 120 86.7
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.4e-52 209.5 120 81.7
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 6.5e-50 200.7 120 76.7
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.5e-50 200.3 117 82.1
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 8.5e-50 200.3 120 76.7
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 1.1e-49 199.9 120 79.2
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 1.1e-49 199.9 120 80.0
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 3.2e-49 198.4 120 78.3
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 5.5e-49 197.6 120 80.0
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 7.2e-49 197.2 120 78.3
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 9.4e-49 196.8 120 77.5
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 2.1e-48 195.7 120 75.0
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 2.1e-48 195.7 120 79.2
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 2.7e-48 195.3 120 75.8
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 2.7e-48 195.3 120 75.8
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 4.7e-48 194.5 120 75.0
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 6.1e-48 194.1 120 77.5
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 8.0e-48 193.7 120 74.2
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 8.0e-48 193.7 119 78.2
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 4.0e-47 191.4 120 75.0
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 6.8e-47 190.7 120 78.3
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 8.8e-47 190.3 117 75.2
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 8.8e-47 190.3 120 75.0
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 1.2e-46 189.9 120 75.0
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 1.2e-46 189.9 120 75.0
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 1.5e-46 189.5 120 73.3
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 1.5e-46 189.5 120 73.3
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.5e-46 189.5 120 75.0
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 2.0e-46 189.1 120 74.2
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 2.6e-46 188.7 120 75.0
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 2.6e-46 188.7 120 74.2
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 2.6e-46 188.7 117 73.5
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 2.6e-46 188.7 120 74.2
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 2.6e-46 188.7 120 74.2
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 3.4e-46 188.3 120 74.2
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 3.4e-46 188.3 120 74.2
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 4.4e-46 188.0 120 73.3
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 7.5e-46 187.2 120 73.3
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 1.3e-45 186.4 120 74.2
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 2.2e-45 185.7 120 73.3
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 4.8e-45 184.5 120 73.3
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 6.3e-45 184.1 118 75.4
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.3e-45 183.7 108 82.4
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 8.3e-45 183.7 120 72.5
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 8.3e-45 183.7 120 72.5
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 8.3e-45 183.7 120 72.5
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 8.3e-45 183.7 120 74.2
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.1e-44 183.3 120 76.7
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 1.4e-44 183.0 120 71.7
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 1.8e-44 182.6 120 71.7
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 4.1e-44 181.4 120 70.8
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 1.2e-43 179.9 120 70.8
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 2.0e-43 179.1 120 71.7
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 1.0e-42 176.8 120 66.7
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 1.0e-42 176.8 122 68.0
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 6.5e-42 174.1 120 73.3
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 1.1e-41 173.3 120 65.8
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 1.9e-41 172.6 120 70.8
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 2.5e-41 172.2 120 70.8
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 3.2e-41 171.8 120 65.0
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 7.2e-41 170.6 120 68.3
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 9.5e-41 170.2 120 66.7
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 1.2e-40 169.9 133 64.7
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 2.8e-40 168.7 108 73.1
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 3.6e-40 168.3 120 65.0
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 8.0e-40 167.2 120 65.0
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 4.0e-39 164.9 120 62.5
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 6.8e-39 164.1 122 68.0
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 2.0e-38 162.5 121 66.1
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 2.6e-38 162.2 121 66.1
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 3.4e-38 161.8 121 66.1
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 3.4e-38 161.8 121 66.1
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 4.4e-38 161.4 121 66.1
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 7.5e-38 160.6 122 67.2
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.8e-38 160.2 119 70.6
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 9.8e-38 160.2 121 65.3
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 2.8e-37 158.7 118 65.3
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 2.8e-37 158.7 117 65.0
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 2.8e-37 158.7 122 65.6
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 3.7e-37 158.3 117 63.2
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 2.4e-36 155.6 112 67.0
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 2.4e-36 155.6 128 60.9
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 3.1e-36 155.2 121 63.6
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 4.1e-36 154.8 114 65.8
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 4.1e-36 154.8 116 66.4
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 2.0e-35 152.5 114 64.0
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 3.5e-35 151.8 119 65.5
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 3.5e-35 151.8 121 63.6
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 5.9e-35 151.0 111 66.7
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 7.8e-35 150.6 125 60.8
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 1.0e-34 150.2 120 63.3
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 2.3e-34 149.1 132 56.1
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 3.8e-34 148.3 110 63.6
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 6.6e-34 147.5 121 61.2
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 6.6e-34 147.5 116 62.9
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 8.6e-34 147.1 110 62.7
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 1.1e-33 146.7 120 62.5
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.6e-33 144.4 114 61.4
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.6e-33 144.4 114 61.4
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.6e-33 144.4 114 61.4
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 7.3e-33 144.1 117 59.8
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 2.1e-32 142.5 111 63.1
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 2.0e-30 136.0 102 66.7
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.3e-29 133.3 73 86.3
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 2.2e-29 132.5 110 59.1
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 2.2e-29 132.5 110 57.3
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 4.1e-28 128.3 107 56.1
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 1.2e-27 126.7 126 49.2
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 5.0e-26 121.3 135 47.4
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 5.0e-26 121.3 139 46.8
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 8.6e-26 120.6 139 45.3
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 6.8e-23 110.9 67 79.1
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 4.9e-21 104.8 127 42.5
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-20 103.6 110 49.1
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 6.6e-18 94.4 110 41.8
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 1.1e-15 87.0 58 74.1
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.6e-14 82.4 56 69.6
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 5.8e-14 81.3 56 69.6
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 9.8e-14 80.5 104 43.3
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 6.0e-11 71.2 102 37.3
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 1.5e-09 66.6 47 68.1


User provided reference genes

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