Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.4e-192 674.5 342 100.0
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.4e-192 674.5 342 100.0
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 2.2e-175 619.0 342 90.9
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 7.0e-174 614.0 342 89.5
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.9e-172 608.6 343 88.6
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.4e-169 599.7 343 88.6
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 8.8e-169 597.0 343 87.2
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 3.7e-167 591.7 342 86.8
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 8.3e-167 590.5 343 87.8
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.8e-166 589.3 343 86.6
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 2.4e-166 589.0 342 87.1
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.0e-164 581.3 342 85.4
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.5e-163 579.7 347 83.3
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.9e-163 579.3 342 84.8
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 9.5e-163 577.0 342 84.2
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.1e-162 575.9 332 87.7
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 2.1e-162 575.9 343 83.4
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 3.6e-162 575.1 342 83.6
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 3.6e-162 575.1 342 83.3
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 6.1e-162 574.3 345 83.5
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 8.0e-162 573.9 345 87.0
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 8.0e-162 573.9 351 83.5
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.4e-161 573.2 355 81.4
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.8e-161 572.8 344 84.3
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 3.0e-161 572.0 342 84.5
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 5.2e-161 571.2 345 82.0
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 6.8e-161 570.9 344 84.0
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 6.8e-161 570.9 348 82.5
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 6.8e-161 570.9 345 83.8
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.5e-160 569.7 348 82.2
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.0e-160 569.3 342 82.7
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 2.0e-160 569.3 345 82.6
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 3.4e-160 568.5 349 82.8
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.4e-160 568.5 342 81.9
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.7e-160 567.8 345 82.6
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 5.7e-160 567.8 344 82.3
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 9.8e-160 567.0 341 83.6
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.7e-159 566.2 346 82.9
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 2.2e-159 565.8 353 81.0
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.9e-159 565.5 346 82.9
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 6.4e-159 564.3 365 78.9
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 8.3e-159 563.9 345 81.7
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.1e-158 563.5 345 82.9
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.4e-158 563.1 346 82.7
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.8e-158 562.8 342 82.7
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 2.4e-158 562.4 353 81.9
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 3.2e-158 562.0 350 81.4
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 5.4e-158 561.2 342 82.2
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 5.4e-158 561.2 323 85.8
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 5.4e-158 561.2 348 80.5
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 7.0e-158 560.8 348 80.5
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.6e-157 559.7 342 81.9
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.6e-157 559.7 348 80.2
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.6e-157 559.7 344 81.7
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 2.7e-157 558.9 345 80.6
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 2.7e-157 558.9 345 81.4
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.7e-157 558.9 342 80.7
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 4.6e-157 558.1 342 81.0
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.8e-157 557.4 348 81.6
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.8e-157 557.4 345 81.2
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.3e-156 556.6 340 82.1
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.7e-156 556.2 323 85.4
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.3e-156 555.8 340 81.5
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.3e-156 555.8 345 80.9
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 5.0e-156 554.7 353 80.2
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 8.6e-156 553.9 370 77.3
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 8.6e-156 553.9 347 79.8
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.5e-155 553.1 345 85.2
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.3e-155 552.0 347 79.5
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 4.3e-155 551.6 345 80.9
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 9.5e-155 550.4 351 79.5
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.1e-154 549.3 347 79.0
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 6.2e-154 547.7 341 81.2
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 8.0e-154 547.4 330 83.6
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 8.0e-154 547.4 359 78.8
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 1.4e-153 546.6 349 80.5
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 4.0e-153 545.0 346 79.8
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.2e-152 543.5 345 80.0
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 2.0e-152 542.7 337 81.3
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 3.4e-152 542.0 343 80.2
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 5.8e-152 541.2 343 79.9
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 1.3e-151 540.0 343 79.3
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.3e-151 540.0 346 80.9
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 4.9e-151 538.1 326 82.8
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 1.4e-150 536.6 343 80.5
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 2.4e-150 535.8 326 82.5
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 2.4e-150 535.8 343 78.4
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 4.1e-150 535.0 347 78.1
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 3.0e-148 528.9 342 77.2
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 3.0e-148 528.9 342 77.2
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 3.0e-148 528.9 342 77.2
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 5.0e-148 528.1 323 81.1
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 1.9e-147 526.2 343 77.3
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.2e-146 523.5 352 75.3
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 1.2e-146 523.5 342 76.6
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 1.2e-146 523.5 342 76.3
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 1.2e-146 523.5 342 76.3
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.6e-146 523.1 349 75.4
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.8e-146 522.3 345 82.3
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 4.7e-146 521.5 344 77.3
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 6.2e-146 521.2 349 74.8
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 6.2e-146 521.2 349 74.8
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 8.1e-146 520.8 352 75.0
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.4e-145 520.0 349 74.8
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 4.0e-145 518.5 350 74.6
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 1.2e-144 516.9 354 73.7
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 4.4e-144 515.0 355 73.2
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 4.4e-144 515.0 343 74.9
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 2.9e-143 512.3 363 72.2
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.4e-142 510.0 323 77.4
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 2.4e-142 509.2 355 73.2
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 5.6e-139 498.0 384 69.3
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 2.1e-138 496.1 342 72.2
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.4e-137 492.7 300 80.7
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 4.4e-136 488.4 336 74.7
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.9e-136 487.3 344 70.6
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.8e-135 485.3 344 71.2
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 4.1e-134 481.9 349 71.3
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 4.1e-134 481.9 342 72.8
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 3.5e-133 478.8 347 69.5
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 1.3e-132 476.9 346 69.1
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 5.1e-132 474.9 348 70.7
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 5.1e-132 474.9 348 70.7
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.1e-131 473.8 342 71.3
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.9e-131 473.0 328 74.1
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 7.3e-131 471.1 339 67.3
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 9.6e-131 470.7 271 86.7
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 9.6e-131 470.7 271 86.7
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 9.6e-131 470.7 349 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.1e-130 469.5 315 73.0
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 6.9e-129 464.5 340 70.3
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.3e-127 460.3 324 69.4
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 2.0e-120 436.4 315 66.7
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 4.5e-120 435.3 272 78.3
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.7e-116 421.4 318 64.5
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.4e-113 412.9 342 59.6
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.2e-111 406.4 322 61.5
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.4e-110 402.9 231 84.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.0e-101 371.7 229 79.0
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 3.3e-99 365.9 256 71.9
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 3.6e-93 345.9 198 83.8
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 3.2e-86 322.8 215 77.2
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.7e-85 319.7 298 54.7
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 9.7e-83 311.2 246 66.3
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 1.8e-73 280.4 185 78.4
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.0e-68 264.6 182 67.6
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.0e-68 264.6 182 67.6
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.2e-60 235.7 165 67.9
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 9.8e-59 231.5 144 80.6
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.8e-57 227.3 131 83.2
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 3.1e-57 226.5 123 87.8
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.2e-54 216.1 122 78.7
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 1.2e-45 188.0 164 61.0
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 2.1e-45 187.2 164 61.6
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 2.6e-43 180.3 164 59.8
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 4.9e-42 176.0 127 69.3
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 1.5e-30 137.9 118 64.4
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 3.3e-30 136.7 173 47.4
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.8e-28 131.0 92 75.0
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 8.9e-28 128.6 70 88.6
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 2.6e-27 127.1 92 72.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 4.7e-21 106.3 78 70.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 8.1e-21 105.5 78 65.4
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 8.4e-18 95.5 186 39.8
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.9e-17 94.4 118 45.8
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 5.1e-15 86.3 78 55.1
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 1.2e-11 75.1 51 74.5
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 3.5e-08 63.5 42 78.6
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.0e-07 62.0 36 72.2
RhsimUnG0176100 Rhododendron simsii HOM05D000026 ORTHO05D000127 6.6e-07 59.3 53 62.3


User provided reference genes

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