Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.9e-110 402.5 199 100.0
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.6e-109 397.9 199 96.0
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 7.4e-83 310.8 188 77.7
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.4e-81 306.6 187 75.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.4e-81 306.6 188 75.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.4e-81 305.8 188 76.1
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 4.0e-81 305.1 187 75.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 4.0e-81 305.1 187 75.4
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 4.0e-81 305.1 187 75.9
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.9e-81 304.3 188 75.0
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 6.9e-81 304.3 188 75.0
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.2e-80 303.5 187 73.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.5e-80 303.1 188 75.5
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 3.4e-80 302.0 188 75.0
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 3.4e-80 302.0 188 73.4
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.5e-80 301.6 187 74.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.8e-80 301.2 188 74.5
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.8e-80 301.2 188 74.5
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.3e-79 300.1 183 77.0
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.2e-79 299.3 188 73.4
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.2e-79 299.3 188 73.9
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.2e-77 293.5 188 71.8
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.6e-77 293.1 189 72.0
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.1e-77 292.7 188 72.9
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.1e-77 292.7 188 71.8
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 2.1e-77 292.7 188 73.4
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 7.9e-77 290.8 188 71.8
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.0e-76 290.4 187 73.8
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 2.3e-76 289.3 188 72.3
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 2.3e-76 289.3 184 73.9
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 8.7e-76 287.3 188 70.7
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 8.7e-76 287.3 188 71.3
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.5e-75 286.6 188 70.7
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.9e-75 286.2 188 71.3
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 2.5e-75 285.8 227 62.1
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 2.5e-75 285.8 188 71.3
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 3.3e-75 285.4 188 69.7
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.4e-75 284.3 187 69.5
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 7.4e-75 284.3 187 71.7
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 7.4e-75 284.3 187 72.2
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.3e-74 283.5 187 71.1
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.6e-74 283.1 188 69.1
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.6e-74 283.1 187 71.7
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.6e-74 283.1 183 72.1
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 2.1e-74 282.7 188 71.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 2.1e-74 282.7 187 70.1
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 4.8e-74 281.6 188 69.1
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 4.8e-74 281.6 187 71.7
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 6.3e-74 281.2 184 71.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.4e-73 280.0 188 70.2
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.1e-73 278.9 183 71.0
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 3.1e-73 278.9 187 69.5
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 5.3e-73 278.1 189 69.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 5.3e-73 278.1 184 70.1
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 6.9e-73 277.7 189 69.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 6.9e-73 277.7 188 70.2
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 9.0e-73 277.3 188 70.7
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-72 276.9 187 70.1
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-72 276.9 187 70.1
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.5e-72 276.6 188 69.1
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 4.5e-72 275.0 184 69.0
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 7.6e-72 274.2 187 69.5
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 7.6e-72 274.2 187 69.5
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.7e-71 273.1 183 69.4
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 2.2e-71 272.7 203 65.5
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.9e-71 272.3 185 68.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 8.5e-71 270.8 188 67.6
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.1e-70 270.4 188 67.6
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.4e-70 270.0 188 66.5
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.9e-70 269.6 188 66.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.5e-70 269.2 187 69.0
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 3.2e-70 268.9 187 69.0
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 9.3e-70 267.3 188 67.0
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.6e-69 266.5 188 68.1
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.7e-69 265.8 188 67.0
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.7e-69 265.8 184 67.9
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.6e-69 265.4 184 67.9
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 4.6e-69 265.0 187 66.3
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.3e-68 263.5 187 68.4
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.8e-68 263.1 190 65.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 5.1e-68 261.5 187 65.8
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.1e-67 260.4 193 63.7
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.5e-67 260.0 183 67.8
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 2.5e-67 259.2 188 65.4
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.5e-67 259.2 190 64.7
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.3e-67 258.5 188 64.4
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 5.7e-67 258.1 188 64.9
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 5.7e-67 258.1 188 64.9
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.7e-67 258.1 188 66.0
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 7.4e-67 257.7 188 64.9
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 7.4e-67 257.7 188 64.9
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 7.4e-67 257.7 187 65.2
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.8e-66 255.0 184 65.8
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 6.3e-66 254.6 191 65.4
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.4e-65 253.4 218 58.3
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.8e-65 253.1 189 65.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.1e-65 251.9 188 64.4
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.2e-64 250.4 184 62.0
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.0e-63 247.3 188 63.3
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.3e-63 246.9 150 74.7
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.7e-63 246.5 188 63.3
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.8e-63 245.4 188 62.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 2.5e-62 242.7 184 63.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 4.2e-62 241.9 188 61.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 6.7e-60 234.6 184 60.9
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.0e-59 233.0 184 62.0
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.4e-57 226.9 185 61.1
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.1e-57 225.7 180 62.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.2e-56 223.8 186 58.1
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.0e-56 223.0 188 57.4
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 7.7e-56 221.1 188 57.4
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 7.7e-56 221.1 147 66.7
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.7e-55 219.9 187 57.2
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.8e-55 218.8 188 58.0
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.2e-54 215.7 189 56.6
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 5.5e-54 214.9 177 59.3
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.0e-52 209.1 189 55.6
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.7e-50 203.4 137 67.2
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.7e-50 203.4 185 53.0
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 7.2e-38 161.4 112 65.2
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.7e-31 140.2 83 75.9
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 9.5e-30 134.4 110 60.0
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 9.5e-30 134.4 79 78.5
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.7e-26 123.6 98 64.3
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.0e-19 100.1 121 46.3
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.1e-17 92.4 95 47.4
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-06 57.8 78 39.7


User provided reference genes

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