Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016126 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 1.8e-101 372.5 178 100.0
CSS0039700 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 6.4e-86 320.9 176 89.8
CSS0043747 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 1.1e-85 320.1 176 89.8
CSS0001270 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 1.6e-84 316.2 176 88.6
Dinv18548 Davidia involucrata HOM05D003463 ORTHO05D004206 9.2e-77 290.4 176 81.2
Hma1.2p1_1378F.1_g279185 Hydrangea macrophylla HOM05D003463 ORTHO05D004206 2.1e-76 289.3 176 81.2
vmacro12241 Vaccinium macrocarpon HOM05D003463 ORTHO05D004206 2.1e-76 289.3 177 81.4
Actinidia12489 Actinidia chinensis HOM05D003463 ORTHO05D004206 1.0e-75 287.0 176 81.8
CSS0019318 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 1.7e-75 286.2 176 80.1
Dinv10901 Davidia involucrata HOM05D003463 ORTHO05D004206 1.7e-75 286.2 176 79.5
Rhsim06G0155700 Rhododendron simsii HOM05D003463 ORTHO05D004206 3.0e-75 285.4 177 80.8
TAR627G0487 Trochodendron aralioides HOM05D003463 ORTHO05D004206 6.2e-73 277.7 176 76.1
Haze_12964 Corylus avellana HOM05D003463 ORTHO05D004206 2.3e-72 275.8 175 77.7
GSVIVG01030649001 Vitis vinifera HOM05D003463 ORTHO05D004206 2.3e-72 275.8 176 76.7
CiPaw.04G119100 Carya illinoinensis HOM05D003463 ORTHO05D004206 1.5e-71 273.1 176 77.3
QL08p034245 Quercus lobata HOM05D003463 ORTHO05D004206 1.5e-71 273.1 176 76.7
TAR629G1280 Trochodendron aralioides HOM05D003463 ORTHO05D004206 2.0e-71 272.7 176 75.0
Cfa014461 Carpinus fangiana HOM05D003463 ORTHO05D004206 7.6e-71 270.8 175 76.6
Ciclev10014009m.g Citrus clementina HOM05D003463 ORTHO05D004206 2.2e-70 269.2 176 73.9
VMungo1080G1634 Vigna mungo HOM05D003463 ORTHO05D004206 4.9e-70 268.1 176 73.3
CiPaw.03G164300 Carya illinoinensis HOM05D003463 ORTHO05D004206 8.4e-70 267.3 176 75.6
Glyma.13G305000 Glycine max HOM05D003463 ORTHO05D004206 1.1e-69 266.9 176 72.7
Phvul.005G112000 Phaseolus vulgaris HOM05D003463 ORTHO05D004206 1.4e-69 266.5 176 72.7
Glyma.12G196800 Glycine max HOM05D003463 ORTHO05D004206 2.4e-69 265.8 176 72.2
Nn1g03744 Nelumbo nucifera HOM05D003463 ORTHO05D004206 2.4e-69 265.8 176 73.9
Cc05_g05330 Coffea canephora HOM05D003463 ORTHO05D004206 7.1e-69 264.2 176 74.4
Glyma.12G102400 Glycine max HOM05D003463 ORTHO05D004206 7.1e-69 264.2 176 72.7
Prupe.3G222600 Prunus persica HOM05D003463 ORTHO05D004206 2.1e-68 262.7 176 73.9
Duzib248G0717 Durio zibethinus HOM05D003463 ORTHO05D004206 2.7e-68 262.3 176 74.4
Nn1g06924 Nelumbo nucifera HOM05D003463 ORTHO05D004206 2.7e-68 262.3 177 72.3
Glyma.06G301900 Glycine max HOM05D003463 ORTHO05D004206 3.5e-68 261.9 176 71.6
Nitab4.5_0001134g0130 Nicotiana tabacum HOM05D003463 ORTHO05D004206 7.8e-68 260.8 176 72.2
FAN02G4525 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.7e-67 259.6 176 72.2
Peaxi162Scf00007g01417 Petunia axillaris HOM05D003463 ORTHO05D004206 1.7e-67 259.6 176 72.2
FvH4_6g43760 Fragaria vesca HOM05D003463 ORTHO05D004206 3.9e-67 258.5 176 71.6
FAN05G2372 Fragaria x ananassa HOM05D003463 ORTHO05D004206 3.9e-67 258.5 176 71.6
FAN14G1979 Fragaria x ananassa HOM05D003463 ORTHO05D004206 3.9e-67 258.5 176 71.6
Oeu035823.1 Olea europaea HOM05D003463 ORTHO05D004206 8.6e-67 257.3 176 69.9
RcHm_v2.0_Chr2g0160501 Rosa chinensis HOM05D003463 ORTHO05D004206 1.1e-66 256.9 176 71.6
CANSAT64G0087 Cannabis sativa HOM05D003463 ORTHO05D004206 1.5e-66 256.5 176 69.9
FAN09G4547 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.9e-66 256.1 176 71.0
MD09G1103200 Malus domestica HOM05D003463 ORTHO05D004206 1.9e-66 256.1 176 73.3
Gohir.A03G162950 Gossypium hirsutum HOM05D003463 ORTHO05D004206 2.5e-66 255.8 177 73.4
Lj3g0003812 Lotus japonicus HOM05D003463 ORTHO05D004206 3.3e-66 255.4 176 70.5
Solyc07g052940.4 Solanum lycopersicum HOM05D003463 ORTHO05D004206 3.3e-66 255.4 176 71.0
Sopen07g026490 Solanum pennellii HOM05D003463 ORTHO05D004206 3.3e-66 255.4 176 71.0
Nitab4.5_0003429g0030 Nicotiana tabacum HOM05D003463 ORTHO05D004206 5.6e-66 254.6 176 70.5
Psat0s3330g0040 Pisum sativum HOM05D003463 ORTHO05D004206 5.6e-66 254.6 176 69.9
COL.COLO4_13026 Corchorus olitorius HOM05D003463 ORTHO05D004206 9.6e-66 253.8 177 72.9
Gorai.005G208600 Gossypium raimondii HOM05D003463 ORTHO05D004206 1.2e-65 253.4 177 72.9
Manes.13G074400 Manihot esculenta HOM05D003463 ORTHO05D004206 1.2e-65 253.4 176 72.2
Lalb_Chr19g0135651 Lupinus albus HOM05D003463 ORTHO05D004206 1.6e-65 253.1 176 70.5
MD17G1091000 Malus domestica HOM05D003463 ORTHO05D004206 1.6e-65 253.1 176 72.2
Atru.chr6.3118 Acer truncatum HOM05D003463 ORTHO05D004206 2.1e-65 252.7 176 71.0
DCAR_021199 Daucus carota HOM05D003463 ORTHO05D004206 2.8e-65 252.3 176 69.9
Lalb_Chr14g0375591 Lupinus albus HOM05D003463 ORTHO05D004206 2.8e-65 252.3 176 69.3
Sed0018482 Sechium edule HOM05D003463 ORTHO05D004206 2.8e-65 252.3 176 69.9
Ca_01564_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 3.6e-65 251.9 176 69.3
ClCG02G001610 Citrullus lanatus HOM05D003463 ORTHO05D004206 4.7e-65 251.5 176 70.5
Potri.017G041100 Populus trichocarpa HOM05D003463 ORTHO05D004206 6.2e-65 251.1 176 69.9
Duzib052G0139 Durio zibethinus HOM05D003463 ORTHO05D004206 1.1e-64 250.4 177 72.3
Gohir.D02G186400 Gossypium hirsutum HOM05D003463 ORTHO05D004206 1.1e-64 250.4 177 72.3
MELO3C018791.2 Cucumis melo HOM05D003463 ORTHO05D004206 1.4e-64 250.0 176 69.9
Migut.M00384 Erythranthe guttata HOM05D003463 ORTHO05D004206 1.8e-64 249.6 176 69.9
Eucgr.A01739 Eucalyptus grandis HOM05D003463 ORTHO05D004206 1.8e-64 249.6 176 70.5
Hund08062 Selenicereus undatus HOM05D003463 ORTHO05D004206 1.8e-64 249.6 177 73.4
CDE05G3394 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 3.1e-64 248.8 176 68.8
Lsat_1_v5_gn_8_129901 Lactuca sativa HOM05D003463 ORTHO05D004206 3.1e-64 248.8 176 69.3
TPR.G30794 Trifolium pratense HOM05D003463 ORTHO05D004206 3.1e-64 248.8 176 68.8
Sed0025509 Sechium edule HOM05D003463 ORTHO05D004206 4.0e-64 248.4 176 68.8
CAN.G86.25 Capsicum annuum HOM05D003463 ORTHO05D004206 6.9e-64 247.7 176 68.2
Psat7g193080 Pisum sativum HOM05D003463 ORTHO05D004206 9.0e-64 247.3 176 68.2
Thecc.02G164300 Theobroma cacao HOM05D003463 ORTHO05D004206 9.0e-64 247.3 177 71.2
CsaV3_7G003880 Cucumis sativus L. HOM05D003463 ORTHO05D004206 1.5e-63 246.5 176 69.3
Medtr4g045743 Medicago truncatula HOM05D003463 ORTHO05D004206 2.0e-63 246.1 176 68.8
Medtr2g089080 Medicago truncatula HOM05D003463 ORTHO05D004206 2.6e-63 245.7 176 68.8
Oeu011067.1 Olea europaea HOM05D003463 ORTHO05D004206 4.4e-63 245.0 176 67.6
SalBow7G2865 Salvia bowleyana HOM05D003463 ORTHO05D004206 4.4e-63 245.0 176 68.2
TPR.G19054 Trifolium pratense HOM05D003463 ORTHO05D004206 4.4e-63 245.0 176 67.6
TWI18G0507 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 4.4e-63 245.0 176 70.5
Lj3g0021154 Lotus japonicus HOM05D003463 ORTHO05D004206 5.8e-63 244.6 176 68.2
DCAR_009696 Daucus carota HOM05D003463 ORTHO05D004206 7.6e-63 244.2 182 68.7
PGR042G2093 Punica granatum HOM05D003463 ORTHO05D004206 7.6e-63 244.2 176 67.0
Nn7g36849 Nelumbo nucifera HOM05D003463 ORTHO05D004206 2.2e-62 242.7 175 70.3
TWI36G1584 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 2.2e-62 242.7 176 68.8
CDE11G1115 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 2.9e-62 242.3 176 66.5
Potri.007G119300 Populus trichocarpa HOM05D003463 ORTHO05D004206 3.8e-62 241.9 176 67.0
Sc21g0001820 Simmondsia chinensis HOM05D003463 ORTHO05D004206 3.8e-62 241.9 177 68.4
Sabra17G0027900 Salix brachista HOM05D003463 ORTHO05D004206 4.9e-62 241.5 176 68.2
AL7G40500 Arabidopsis lyrata HOM05D003463 ORTHO05D004206 8.4e-62 240.7 177 63.8
Thhalv10024183m.g Eutrema salsugineum HOM05D003463 ORTHO05D004206 1.1e-61 240.4 177 64.4
Aa31LG8G8660 Aethionema arabicum HOM05D003463 ORTHO05D004206 1.9e-61 239.6 176 63.6
AT4G15180 Arabidopsis thaliana HOM05D003463 ORTHO05D004206 2.4e-61 239.2 177 63.8
HanXRQChr17g0563751 Helianthus annuus HOM05D003463 ORTHO05D004206 2.4e-61 239.2 176 65.9
CARHR221910 Cardamine hirsuta HOM05D003463 ORTHO05D004206 3.2e-61 238.8 177 63.3
Ca_20672_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 4.2e-61 238.4 176 66.5
SGA_v2.0_scaffold34G13880 Striga asiatica HOM05D003463 ORTHO05D004206 1.2e-60 236.9 176 63.6
PSO541G5151 Papaver somniferum HOM05D003463 ORTHO05D004206 2.1e-60 236.1 176 65.9
PSO675G4322 Papaver somniferum HOM05D003463 ORTHO05D004206 6.0e-60 234.6 176 65.3
Sp7g13400 Schrenkiella parvula HOM05D003463 ORTHO05D004206 7.8e-60 234.2 177 63.3
A01p22340 Brassica napus HOM05D003463 ORTHO05D004206 1.0e-59 233.8 177 62.1
BraA01t02149Z Brassica rapa HOM05D003463 ORTHO05D004206 1.0e-59 233.8 177 62.1
Ah.01g005040 Amaranthus hybridus HOM05D003463 ORTHO05D004206 3.0e-59 232.3 177 67.2
BcaC08g44245 Brassica carinata HOM05D003463 ORTHO05D004206 3.0e-59 232.3 176 61.9
C06p16490 Brassica napus HOM05D003463 ORTHO05D004206 3.0e-59 232.3 176 61.9
BolC6t36852H Brassica oleracea HOM05D003463 ORTHO05D004206 3.0e-59 232.3 176 61.9
Os08g0180100 Oryza sativa ssp. japonica HOM05D003463 ORTHO05D004206 3.0e-59 232.3 176 64.2
Aqoxy4G01913 Aquilegia oxysepala HOM05D003463 ORTHO05D004206 6.6e-59 231.1 176 63.1
BcaC09g50202 Brassica carinata HOM05D003463 ORTHO05D004206 6.6e-59 231.1 177 61.6
EL10Ac9g22340 Beta vulgaris HOM05D003463 ORTHO05D004206 1.1e-58 230.3 178 68.5
A05p17060 Brassica napus HOM05D003463 ORTHO05D004206 1.1e-58 230.3 176 61.4
BraA05t20607Z Brassica rapa HOM05D003463 ORTHO05D004206 1.1e-58 230.3 176 61.4
BcaB02g07835 Brassica carinata HOM05D003463 ORTHO05D004206 1.5e-58 229.9 176 61.4
BcaNung00300 Brassica carinata HOM05D003463 ORTHO05D004206 5.6e-58 228.0 177 60.5
C01p27890 Brassica napus HOM05D003463 ORTHO05D004206 7.3e-58 227.6 177 59.9
BolC1t02722H Brassica oleracea HOM05D003463 ORTHO05D004206 7.3e-58 227.6 177 59.9
ECA233G2663 Erigeron canadensis HOM05D003463 ORTHO05D004206 7.3e-58 227.6 176 63.6
ATR0804G005 Amborella trichopoda HOM05D003463 ORTHO05D004206 9.6e-58 227.3 176 63.1
Zm00001eb413080 Zea mays HOM05D003463 ORTHO05D004206 8.1e-57 224.2 176 61.9
Zm00001eb171790 Zea mays HOM05D003463 ORTHO05D004206 1.4e-56 223.4 176 61.9
Eucgr.E02490 Eucalyptus grandis HOM05D003463 ORTHO05D004206 5.3e-56 221.5 176 64.8
Hma1.2p1_2477F.1_g322850 Hydrangea macrophylla HOM05D003463 ORTHO05D004206 2.6e-55 219.2 176 65.9
Lj1C753T3 Lonicera japonica HOM05D003463 ORTHO05D004206 3.4e-55 218.8 147 74.1
THA.LOC104808502 Tarenaya hassleriana HOM05D003463 ORTHO05D004206 9.9e-55 217.2 178 60.1
Actinidia27017 Actinidia chinensis HOM05D003463 ORTHO05D004206 2.5e-50 202.6 140 72.1
SHI10282 Sapria himalayana HOM05D003463 ORTHO05D004206 2.5e-50 202.6 176 56.8
CSS0047242 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 5.8e-47 191.4 102 91.2
SEGI_02831 Sequoiadendron giganteum HOM05D003463 ORTHO05D004206 4.0e-40 168.7 176 50.6
Cpa.g.sc8.254 Carica papaya HOM05D003463 ORTHO05D004206 1.2e-36 157.1 101 76.2
Nn2g15719 Nelumbo nucifera HOM05D003463 ORTHO05D004206 1.4e-29 133.7 94 73.4
Pp3c11_18840 Physcomitrium patens HOM05D003463 ORTHO05D004206 9.3e-29 131.0 178 43.3
Pp3c7_5920 Physcomitrium patens HOM05D003463 ORTHO05D004206 2.7e-28 129.4 178 43.3
Pp3c7_5929 Physcomitrium patens HOM05D003463 ORTHO05D004206 2.7e-28 129.4 178 43.3
unitig_8.g4614 Utricularia gibba HOM05D003463 ORTHO05D004206 2.7e-28 129.4 103 61.2
Nn5g27117 Nelumbo nucifera HOM05D003463 ORTHO05D004206 8.8e-27 124.4 104 67.3
Nn5g27119 Nelumbo nucifera HOM05D003463 ORTHO05D004206 8.8e-27 124.4 104 67.3
Mapoly0021s0105 Marchantia polymorpha HOM05D003463 ORTHO05D004206 2.8e-25 119.4 176 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2770 Anthoceros agrestis HOM05D003463 ORTHO05D004206 2.6e-23 112.8 174 37.9
Nn2g14668 Nelumbo nucifera HOM05D003463 ORTHO05D004206 7.7e-23 111.3 70 68.6
HanXRQChr11g0343651 Helianthus annuus HOM05D001440 ORTHO05D001119 6.5e-22 108.2 95 58.9
CBR_g54148 Chara braunii HOM05D003463 ORTHO05D004206 1.4e-21 107.1 178 37.6
HanXRQChr04g0111771 Helianthus annuus HOM05D003463 ORTHO05D004206 2.0e-15 86.7 64 64.1
RcHm_v2.0_Chr2g0131031 Rosa chinensis HOM05D003463 ORTHO05D004206 6.7e-11 71.6 70 52.9


User provided reference genes

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