Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.3e-76 288.9 151 100.0
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.2e-48 196.8 109 88.1
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 5.5e-46 188.0 109 84.4
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 1.6e-45 186.4 109 83.5
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.6e-45 186.4 112 77.7
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 2.1e-45 186.0 107 80.4
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 2.7e-45 185.7 106 82.1
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 7.9e-45 184.1 108 83.3
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.0e-44 183.7 107 84.1
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.3e-44 183.3 119 74.8
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.8e-44 183.0 108 81.5
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.8e-44 183.0 108 81.5
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.3e-44 182.6 109 83.5
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.3e-44 182.6 109 81.7
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 3.0e-44 182.2 108 83.3
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 3.9e-44 181.8 108 80.6
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 3.9e-44 181.8 108 80.6
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 3.9e-44 181.8 108 80.6
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 6.7e-44 181.0 108 82.4
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.1e-43 180.3 108 84.3
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.5e-43 179.9 108 81.5
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.5e-43 179.9 108 81.5
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.5e-43 179.9 108 83.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.5e-43 179.9 108 83.3
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 3.3e-43 178.7 108 79.6
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 4.3e-43 178.3 109 81.7
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 7.4e-43 177.6 107 78.5
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 9.6e-43 177.2 108 80.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.1e-42 176.0 107 76.6
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 2.8e-42 175.6 108 81.5
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.8e-42 175.6 108 80.6
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 4.8e-42 174.9 108 81.5
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 4.8e-42 174.9 108 77.8
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 6.3e-42 174.5 108 80.6
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 8.2e-42 174.1 108 77.8
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 8.2e-42 174.1 107 78.5
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.1e-41 173.7 108 75.9
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 1.1e-41 173.7 108 81.5
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.1e-41 173.7 111 77.5
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.4e-41 173.3 108 78.7
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.4e-41 173.3 108 77.8
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 1.8e-41 172.9 109 77.1
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.1e-41 172.2 107 76.6
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 3.1e-41 172.2 110 77.3
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 3.1e-41 172.2 106 79.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.9e-41 171.0 104 77.9
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 6.9e-41 171.0 107 77.6
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 9.0e-41 170.6 107 76.6
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.2e-40 170.2 107 73.8
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 2.0e-40 169.5 109 78.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 4.5e-40 168.3 108 75.9
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 7.6e-40 167.5 108 75.9
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.6e-40 167.5 102 77.5
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 7.6e-40 167.5 107 75.7
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 7.6e-40 167.5 106 76.4
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.3e-39 166.8 107 76.6
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.7e-39 166.4 107 76.6
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.7e-39 166.4 106 77.4
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.7e-39 166.4 109 73.4
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.7e-39 166.4 107 75.7
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 2.2e-39 166.0 107 76.6
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.2e-39 166.0 107 76.6
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.2e-39 166.0 107 76.6
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 2.2e-39 166.0 107 76.6
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.9e-39 165.6 106 77.4
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.8e-39 165.2 98 78.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.8e-39 165.2 98 78.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 5.0e-39 164.9 107 77.6
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 5.0e-39 164.9 107 75.7
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.1e-38 163.7 111 70.3
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 3.2e-38 162.2 107 73.8
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 3.2e-38 162.2 106 71.7
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 4.2e-38 161.8 107 74.8
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 4.2e-38 161.8 107 74.8
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 5.5e-38 161.4 103 72.8
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 9.3e-38 160.6 107 73.8
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.6e-37 159.8 110 70.9
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 2.1e-37 159.5 106 70.8
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.6e-37 158.7 108 73.1
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 4.6e-37 158.3 105 74.3
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.0e-36 157.1 107 75.7
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 1.8e-36 156.4 107 71.0
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 3.0e-36 155.6 114 70.2
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 3.7e-34 148.7 100 76.0
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 8.2e-34 147.5 103 72.8
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 4.1e-33 145.2 97 76.3
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 2.2e-31 139.4 86 75.6
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 5.0e-31 138.3 103 61.2
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 8.5e-31 137.5 108 63.9
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.1e-30 137.1 107 62.6
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 4.2e-30 135.2 107 62.6
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 7.2e-30 134.4 107 61.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 9.4e-30 134.0 96 64.6
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.2e-29 133.7 108 63.0
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.0e-27 126.3 99 66.7
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.6e-27 125.9 99 66.7
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 4.4e-27 125.2 100 65.0
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 5.3e-17 91.7 68 70.6
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 4.0e-12 75.5 48 77.1
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.1e-09 67.4 73 49.3
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 9.1e-09 64.3 100 35.0
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 4.5e-08 62.0 107 31.8
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.5e-06 57.0 38 68.4
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.5e-06 57.0 38 68.4


User provided reference genes

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