Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.3e-48 195.3 101 100.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.9e-43 178.3 93 98.9
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.1e-42 176.4 93 97.8
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.3e-38 162.9 93 88.2
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.8e-38 161.8 93 89.2
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 6.3e-38 160.6 93 87.1
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 6.3e-38 160.6 93 88.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.1e-37 159.8 93 87.1
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.3e-35 152.9 93 81.7
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 5.0e-35 151.0 91 84.6
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 5.0e-35 151.0 93 81.7
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.1e-34 149.8 93 78.5
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 3.2e-34 148.3 91 81.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.2e-34 148.3 93 79.6
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.2e-34 148.3 93 81.7
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 5.5e-34 147.5 93 78.5
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 5.5e-34 147.5 92 79.3
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 7.2e-34 147.1 93 77.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 9.3e-34 146.7 93 77.4
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-33 146.4 93 78.5
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-33 146.4 93 78.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.2e-33 146.4 93 76.3
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.6e-33 146.0 93 74.2
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.6e-33 146.0 93 74.2
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.6e-33 146.0 93 78.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 2.1e-33 145.6 93 76.3
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.1e-33 145.6 93 78.5
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.7e-33 145.2 93 77.4
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 2.7e-33 145.2 93 76.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.5e-33 144.8 93 78.5
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 4.6e-33 144.4 93 77.4
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 4.6e-33 144.4 93 75.3
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 76.3
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 75.3
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 74.2
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 75.3
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 74.2
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.0e-32 143.3 93 73.1
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.3e-32 142.9 93 73.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.3e-32 142.9 93 77.4
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.8e-32 142.5 93 73.1
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 2.3e-32 142.1 93 77.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.3e-32 142.1 93 75.3
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 3.0e-32 141.7 93 75.3
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.9e-32 141.4 95 75.8
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.9e-32 141.4 93 75.3
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 3.9e-32 141.4 93 75.3
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.9e-32 141.4 95 72.6
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.1e-32 141.0 93 74.2
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 5.1e-32 141.0 93 74.2
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 5.1e-32 141.0 93 76.3
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.1e-31 139.8 93 76.3
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.5e-31 138.7 91 75.8
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.5e-31 138.7 93 75.3
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 3.3e-31 138.3 93 76.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 3.3e-31 138.3 93 74.2
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 5.7e-31 137.5 93 71.0
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 5.7e-31 137.5 93 75.3
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 7.4e-31 137.1 93 71.0
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 7.4e-31 137.1 93 72.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.4e-31 137.1 93 72.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.6e-30 136.0 93 71.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.6e-30 136.0 93 71.0
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.6e-30 136.0 93 71.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 2.2e-30 135.6 93 71.0
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.7e-30 134.8 93 72.0
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 4.8e-30 134.4 91 71.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 8.2e-30 133.7 93 74.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 8.2e-30 133.7 93 71.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-29 133.3 91 71.4
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-29 133.3 91 71.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.4e-29 132.9 93 71.0
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.1e-29 131.7 93 69.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 4.1e-29 131.3 92 70.7
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.1e-29 131.3 93 73.1
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 6.9e-29 130.6 93 69.9
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 9.0e-29 130.2 93 72.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-28 129.8 96 77.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.5e-28 129.4 93 68.8
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.5e-28 129.4 93 75.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.0e-28 129.0 93 67.7
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 2.6e-28 128.6 93 67.7
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.6e-28 128.6 93 68.8
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.4e-28 128.3 93 67.7
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 3.4e-28 128.3 93 67.7
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 3.4e-28 128.3 93 67.7
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.4e-28 128.3 93 66.7
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 4.5e-28 127.9 93 66.7
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 5.9e-28 127.5 93 64.5
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.0e-27 126.7 93 66.7
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.0e-27 126.7 93 66.7
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.3e-27 126.3 93 73.1
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.3e-27 126.3 93 73.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 5.5e-26 120.9 93 71.0
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 3.0e-24 115.2 93 67.7
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.8e-24 113.6 116 54.3
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.3e-23 111.7 93 65.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.4e-21 106.3 93 58.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 2.0e-20 102.4 89 59.6
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 1.4e-18 96.3 95 54.7
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.9e-18 95.9 65 73.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 2.1e-17 92.4 66 69.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.1e-17 92.4 93 53.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.4e-16 89.7 95 48.4
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.8e-16 89.4 64 70.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 3.9e-16 88.2 66 69.7
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 1.5e-15 86.3 82 57.3
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.3e-14 83.2 64 67.2
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 8.5e-11 70.5 89 47.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.2e-10 68.2 88 48.9
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.6e-09 66.2 56 66.1


User provided reference genes

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