Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015857 Camellia sinensis var. sinensis HOM05D060503 ORTHO05D012650 1.0e-84 316.6 153 100.0
CSS0013954 Camellia sinensis var. sinensis HOM05D060503 ORTHO05D012650 1.3e-82 309.7 160 95.6
CSS0000836 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-50 203.0 177 62.7
CSS0011535 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-49 200.3 183 60.7
CSS0027007 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-47 193.7 135 74.8
CSS0024117 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-22 108.2 132 44.7
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-20 102.1 127 44.1
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.8e-19 98.2 130 40.8
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.7e-18 96.7 128 40.6
CSS0025135 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-17 93.2 129 41.1
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.2e-16 90.5 139 37.4
CSS0012115 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-16 88.2 133 41.4
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.8e-16 87.8 111 42.3
CSS0043146 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-15 87.4 140 34.3
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-15 86.7 137 37.2
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-14 84.0 111 41.4
CSS0003706 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-14 83.2 130 36.2
CSS0004206 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-14 82.8 137 35.8
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-14 82.0 113 39.8
RcHm_v2.0_Chr1g0330721 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-13 79.0 109 37.6
CSS0021428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-13 78.6 126 36.5
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 8.1e-13 77.8 144 35.4
Nn7g37205 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-12 77.4 110 39.1
FvH4_4g30271 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-12 76.6 129 35.7
TPR.G10086 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-12 76.3 67 53.7
FvH4_6g43842 Fragaria vesca HOM05D000002 ORTHO05D000001 8.9e-12 74.3 154 32.5
CSS0036158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-11 73.9 125 37.6
CSS0048929 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-11 73.9 127 39.4
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-11 73.6 135 35.6
CSS0018474 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-11 73.2 63 50.8
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 5.8e-11 71.6 137 31.4
TPR.G10372 Trifolium pratense HOM05D000002 ORTHO05D000001 5.8e-11 71.6 63 52.4
CSS0036914 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-11 71.2 132 37.9
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-10 68.9 152 33.6
MD15G1058600 Malus domestica HOM05D001840 ORTHO05D000001 6.4e-10 68.2 128 33.6
TPR.G5909 Trifolium pratense HOM05D000002 ORTHO05D000001 8.4e-10 67.8 63 50.8
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 67.4 71 49.3
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 67.4 71 49.3
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 67.4 71 49.3
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-09 66.6 127 33.9
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-09 65.9 126 31.7
Sopen08g006700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-09 65.9 130 34.6
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-09 65.5 74 45.9
CSS0031781 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-09 65.1 104 35.6
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-09 65.1 144 29.9
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 5.4e-09 65.1 127 33.1
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-09 64.7 118 31.4
FvH4_1g19621 Fragaria vesca HOM05D014087 ORTHO05D012650 7.1e-09 64.7 130 30.8
RcHm_v2.0_Chr4g0409141 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-09 64.7 125 34.4
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 64.7 142 35.9
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-09 64.3 75 44.0
Sopen00g013840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 134 34.3
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 134 34.3
Sopen06g019130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 64 50.0
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 134 34.3
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 134 34.3
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 134 34.3
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-08 63.2 88 37.5
ECA248G1333 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-08 63.2 128 35.2
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 135 31.9
CSS0038200 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-08 62.4 130 33.1
CARHR251900 Cardamine hirsuta HOM05D000264 ORTHO05D000001 3.5e-08 62.4 64 46.9
ECA240G2424 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-08 62.4 66 45.5
SHI49722 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-08 62.4 64 45.3
SHI49766 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-08 62.4 64 45.3
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-08 62.4 142 34.5
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-08 62.4 142 34.5
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-08 62.4 142 34.5
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-08 62.4 142 34.5
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 3.5e-08 62.4 111 35.1
TPR.G33268 Trifolium pratense HOM05D000002 ORTHO05D000001 3.5e-08 62.4 168 31.0
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-08 62.0 132 32.6
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-08 62.0 135 31.9
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 4.6e-08 62.0 125 32.0
CSS0041125 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.0e-08 61.6 144 29.2
ECA232G4597 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.0e-08 61.6 66 40.9
ECA246G0844 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-08 61.6 125 33.6
SHI17169 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-08 61.6 57 50.9
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-08 61.6 126 34.1
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-08 61.6 135 32.6
FvH4_4g30901 Fragaria vesca HOM05D000002 ORTHO05D000001 7.8e-08 61.2 133 30.8
Sopen02g024250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 151 33.8
Sopen06g007920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 134 30.6
Sopen09g007480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 131 33.6
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 134 30.6
TPR.G23261 Trifolium pratense HOM05D000501 ORTHO05D000376 1.0e-07 60.8 137 31.4
ECA234G1208 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 63 42.9
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 145 31.7
ECA238G1036 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 60.1 63 46.0
ECA236G4891 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 63 44.4
SHI05324 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-07 59.7 55 50.9
Sopen02g009840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 59.3 72 38.9
ECA247G0863 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 87 33.3
Lalb_Chr23g0277681 Lupinus albus HOM05D000002 ORTHO05D000001 3.9e-07 58.9 125 32.8
RcHm_v2.0_Chr5g0045971 Rosa chinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 57 47.4
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 58.9 126 32.5
CSS0036055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-07 58.5 52 48.1
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-07 58.5 63 42.9
ECA233G1338 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.6e-07 58.2 133 34.6
ECA238G2859 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-07 58.2 136 29.4
ECA248G2341 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-07 58.2 152 33.6
FvH4_6g26671 Fragaria vesca HOM05D000006 ORTHO05D000001 6.6e-07 58.2 108 32.4
ECA232G4093 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.8 60 41.7
ECA247G1405 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.8 66 39.4
Sopen12g010580 Solanum pennellii HOM05D000014 ORTHO05D000093 8.6e-07 57.8 132 34.1
TPR.G23755 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-06 57.4 149 31.5
ECA246G2595 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 76 35.5
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 57.0 128 32.0
Nn5g26836 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-06 56.6 124 33.1
ECA232G1539 Erigeron canadensis HOM05D001472 ORTHO05D002655 2.5e-06 56.2 62 41.9
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 60 41.7
ECA248G1506 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 60 43.3
FvH4_7g03911 Fragaria vesca HOM05D000002 ORTHO05D000001 3.3e-06 55.8 60 43.3
Sopen01g009120 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.8 126 32.5
ECA234G4411 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-06 55.5 109 29.4
SHI03309 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.5 170 26.5
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 54.7 64 43.8
ECA238G0299 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.3e-06 54.7 80 33.8
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 7.3e-06 54.7 128 29.7
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 54.3 157 31.2


User provided reference genes

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