Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015702 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 6.1e-79 297.4 145 100.0
CSS0042301 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 1.7e-65 252.7 136 91.9
CSS0026720 Camellia sinensis var. sinensis HOM05D004091 ORTHO05D004581 3.9e-65 251.5 136 91.2
Actinidia24146 Actinidia chinensis HOM05D004091 ORTHO05D004581 5.1e-49 198.0 136 72.8
Dinv16219 Davidia involucrata HOM05D004091 ORTHO05D004581 9.0e-46 187.2 136 67.6
Rhsim13G0100400 Rhododendron simsii HOM05D004091 ORTHO05D004581 5.4e-43 177.9 135 67.4
GSVIVG01031466001 Vitis vinifera HOM05D004091 ORTHO05D004581 1.6e-42 176.4 136 63.2
vmacro03254 Vaccinium macrocarpon HOM05D004091 ORTHO05D004581 3.3e-40 168.7 136 64.7
Gorai.009G090400 Gossypium raimondii HOM05D004091 ORTHO05D004581 4.3e-40 168.3 136 61.0
Gohir.D05G088200 Gossypium hirsutum HOM05D004091 ORTHO05D004581 5.6e-40 167.9 135 60.0
Thecc.09G298700 Theobroma cacao HOM05D004091 ORTHO05D004581 7.3e-40 167.5 135 61.5
Duzib170G1119 Durio zibethinus HOM05D004091 ORTHO05D004581 9.6e-40 167.2 135 59.3
TAR369G1011 Trochodendron aralioides HOM05D004091 ORTHO05D004581 1.3e-39 166.8 135 60.7
Potri.009G005600 Populus trichocarpa HOM05D004091 ORTHO05D004581 1.6e-39 166.4 134 63.4
TAR623G0825 Trochodendron aralioides HOM05D004091 ORTHO05D004581 1.6e-39 166.4 139 61.9
Glyma.13G322100 Glycine max HOM05D004091 ORTHO05D004581 3.6e-39 165.2 140 59.3
Lj3g0003103 Lotus japonicus HOM05D004091 ORTHO05D004581 4.8e-39 164.9 138 58.7
COL.COLO4_19192 Corchorus olitorius HOM05D004091 ORTHO05D004581 1.1e-38 163.7 135 59.3
Gohir.A05G087000 Gossypium hirsutum HOM05D004091 ORTHO05D004581 1.1e-38 163.7 136 58.8
TWI79G0199 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 1.4e-38 163.3 138 58.0
Phvul.005G130500 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 1.8e-38 162.9 138 57.2
VMungo1080G0687 Vigna mungo HOM05D004091 ORTHO05D004581 3.1e-38 162.2 138 56.5
Medtr2g084280 Medicago truncatula HOM05D004091 ORTHO05D004581 4.0e-38 161.8 138 58.0
TWI79G0102 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 5.3e-38 161.4 138 57.2
Glyma.12G178500 Glycine max HOM05D004091 ORTHO05D004581 6.9e-38 161.0 140 58.6
TPR.G21029 Trifolium pratense HOM05D004091 ORTHO05D004581 6.9e-38 161.0 138 56.5
Cfa001699 Carpinus fangiana HOM05D004091 ORTHO05D004581 9.0e-38 160.6 136 61.0
TWI75G1803 Tripterygium wilfordii HOM05D004091 ORTHO05D004581 1.5e-37 159.8 138 58.0
CiPaw.11G059100 Carya illinoinensis HOM05D004091 ORTHO05D004581 2.0e-37 159.5 136 59.6
Medtr4g057270 Medicago truncatula HOM05D004091 ORTHO05D004581 2.0e-37 159.5 138 56.5
Ca_01707_v3 Cicer arietinum L. HOM05D004091 ORTHO05D004581 3.4e-37 158.7 139 56.8
TPR.G36836 Trifolium pratense HOM05D004091 ORTHO05D004581 3.4e-37 158.7 138 56.5
Haze_16835 Corylus avellana HOM05D004091 ORTHO05D004581 8.4e-36 154.1 136 58.1
Oeu007735.1 Olea europaea HOM05D004091 ORTHO05D004581 9.3e-35 150.6 138 57.2
Eucgr.B03931 Eucalyptus grandis HOM05D004091 ORTHO05D004581 1.2e-34 150.2 134 57.5
Sabra09G0002900 Salix brachista HOM05D004091 ORTHO05D004581 1.2e-34 150.2 133 60.2
arahy.Tifrunner.gnm1.ann1.H3UHY6 Arachis hypogaea HOM05D004091 ORTHO05D004581 3.5e-34 148.7 139 51.8
Ciclev10029784m.g Citrus clementina HOM05D004091 ORTHO05D004581 3.5e-34 148.7 134 54.5
Manes.11G152300 Manihot esculenta HOM05D004091 ORTHO05D004581 4.6e-34 148.3 134 56.0
Lalb_Chr22g0350411 Lupinus albus HOM05D004091 ORTHO05D004581 6.0e-34 147.9 140 54.3
PGR102G0619 Punica granatum HOM05D004091 ORTHO05D004581 7.9e-34 147.5 138 60.1
Gohir.A09G088800 Gossypium hirsutum HOM05D004091 ORTHO05D004581 1.0e-33 147.1 135 53.3
Atru.chr3.3518 Acer truncatum HOM05D004091 ORTHO05D004581 1.8e-33 146.4 142 54.9
arahy.Tifrunner.gnm1.ann1.MIP29L Arachis hypogaea HOM05D004091 ORTHO05D004581 1.8e-33 146.4 139 51.1
Ciclev10030052m.g Citrus clementina HOM05D004091 ORTHO05D004581 2.3e-33 146.0 139 53.2
Lalb_Chr24g0394931 Lupinus albus HOM05D004091 ORTHO05D004581 2.3e-33 146.0 140 52.1
Nn2g13852 Nelumbo nucifera HOM05D004091 ORTHO05D004581 2.3e-33 146.0 138 55.8
BolC4t23837H Brassica oleracea HOM05D004091 ORTHO05D004581 3.0e-33 145.6 139 55.4
QL01p015070 Quercus lobata HOM05D004091 ORTHO05D004581 3.0e-33 145.6 136 55.9
AUR62014973 Chenopodium quinoa HOM05D004091 ORTHO05D004581 3.9e-33 145.2 136 51.5
Gorai.006G105000 Gossypium raimondii HOM05D004091 ORTHO05D004581 5.1e-33 144.8 134 53.7
THA.LOC104826386 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 6.7e-33 144.4 135 54.8
BcaC02g10950 Brassica carinata HOM05D004091 ORTHO05D004581 8.7e-33 144.1 139 55.4
C04p23350 Brassica napus HOM05D004091 ORTHO05D004581 8.7e-33 144.1 139 55.4
Lj3g0002714 Lotus japonicus HOM05D004091 ORTHO05D004581 8.7e-33 144.1 138 52.9
EL10Ac9g22622 Beta vulgaris HOM05D004091 ORTHO05D004581 1.1e-32 143.7 139 51.8
Peaxi162Scf00530g00031 Petunia axillaris HOM05D004091 ORTHO05D004581 1.5e-32 143.3 135 52.6
Sp4g10970 Schrenkiella parvula HOM05D004091 ORTHO05D004581 1.5e-32 143.3 139 53.2
Carub.0004s0898 Capsella rubella HOM05D004091 ORTHO05D004581 1.9e-32 142.9 139 52.5
CARHR121010 Cardamine hirsuta HOM05D004091 ORTHO05D004581 1.9e-32 142.9 139 52.5
DCAR_022765 Daucus carota HOM05D004091 ORTHO05D004581 1.9e-32 142.9 138 54.3
Thhalv10016957m.g Eutrema salsugineum HOM05D004091 ORTHO05D004581 2.5e-32 142.5 139 53.2
Aa31LG5G7980 Aethionema arabicum HOM05D004091 ORTHO05D004581 4.3e-32 141.7 135 53.3
AL4G21990 Arabidopsis lyrata HOM05D004091 ORTHO05D004581 7.4e-32 141.0 139 52.5
BraA07t29581Z Brassica rapa HOM05D004091 ORTHO05D004581 1.3e-31 140.2 139 53.2
Nn6g35240 Nelumbo nucifera HOM05D004091 ORTHO05D004581 1.3e-31 140.2 142 54.2
Migut.D02290 Erythranthe guttata HOM05D004091 ORTHO05D004581 1.6e-31 139.8 135 51.9
AT2G28160 Arabidopsis thaliana HOM05D004091 ORTHO05D004581 2.8e-31 139.0 139 52.5
CANSAT54G0269 Cannabis sativa HOM05D004091 ORTHO05D004581 2.8e-31 139.0 143 52.4
Lalb_Chr14g0374401 Lupinus albus HOM05D004091 ORTHO05D004581 2.8e-31 139.0 135 53.3
Nn6g35225 Nelumbo nucifera HOM05D004091 ORTHO05D004581 2.8e-31 139.0 142 54.9
Aqoxy2G01663 Aquilegia oxysepala HOM05D004091 ORTHO05D004581 3.7e-31 138.7 139 51.1
MELO3C026952.2 Cucumis melo HOM05D004091 ORTHO05D004581 3.7e-31 138.7 135 54.1
Glyma.11G192800 Glycine max HOM05D004091 ORTHO05D004581 6.2e-31 137.9 135 52.6
THA.LOC104800575 Tarenaya hassleriana HOM05D004091 ORTHO05D004581 6.2e-31 137.9 135 51.9
Nitab4.5_0001634g0050 Nicotiana tabacum HOM05D004091 ORTHO05D004581 1.1e-30 137.1 135 53.3
Nitab4.5_0001634g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 1.1e-30 137.1 137 51.8
A07p18700 Brassica napus HOM05D004091 ORTHO05D004581 1.4e-30 136.7 139 51.8
Peaxi162Scf00490g00018 Petunia axillaris HOM05D004091 ORTHO05D004581 1.8e-30 136.3 135 51.1
Prupe.6G112600 Prunus persica HOM05D004091 ORTHO05D004581 1.8e-30 136.3 143 52.4
Cc01_g10310 Coffea canephora HOM05D004091 ORTHO05D004581 3.1e-30 135.6 135 53.3
CsaV3_6G014370 Cucumis sativus L. HOM05D004091 ORTHO05D004581 3.1e-30 135.6 135 52.6
BcaB01g03093 Brassica carinata HOM05D004091 ORTHO05D004581 5.3e-30 134.8 139 51.1
BcaB06g28191 Brassica carinata HOM05D004091 ORTHO05D004581 5.3e-30 134.8 139 52.5
FAN25G1486 Fragaria x ananassa HOM05D004091 ORTHO05D004581 6.9e-30 134.4 141 53.9
C03p31680 Brassica napus HOM05D004091 ORTHO05D004581 1.5e-29 133.3 139 51.1
Nitab4.5_0001897g0030 Nicotiana tabacum HOM05D004091 ORTHO05D004581 1.5e-29 133.3 135 51.1
FAN16G2177 Fragaria x ananassa HOM05D004091 ORTHO05D004581 2.0e-29 132.9 141 53.9
BcaC02g08204 Brassica carinata HOM05D004091 ORTHO05D004581 2.6e-29 132.5 139 51.8
BolC4t27254H Brassica oleracea HOM05D004091 ORTHO05D004581 2.6e-29 132.5 139 51.8
BraA04t17704Z Brassica rapa HOM05D004091 ORTHO05D004581 2.6e-29 132.5 139 51.8
MSTRG.18701 Avicennia marina HOM05D004091 ORTHO05D004581 3.4e-29 132.1 138 50.7
Cpa.g.c28125.2 Carica papaya HOM05D004091 ORTHO05D004581 3.4e-29 132.1 135 50.4
PGSC0003DMG400019017 Solanum tuberosum HOM05D004091 ORTHO05D004581 4.5e-29 131.7 138 50.7
CAN.G246.1 Capsicum annuum HOM05D004091 ORTHO05D004581 7.6e-29 131.0 137 49.6
A03p26390 Brassica napus HOM05D004091 ORTHO05D004581 9.9e-29 130.6 139 50.4
BraA03t11854Z Brassica rapa HOM05D004091 ORTHO05D004581 9.9e-29 130.6 139 50.4
Phvul.011G086200 Phaseolus vulgaris HOM05D004091 ORTHO05D004581 9.9e-29 130.6 134 50.7
Sopen06g017530 Solanum pennellii HOM05D004091 ORTHO05D004581 9.9e-29 130.6 138 50.7
BcaB02g10153 Brassica carinata HOM05D004091 ORTHO05D004581 1.3e-28 130.2 135 51.9
BcaC01g04962 Brassica carinata HOM05D004091 ORTHO05D004581 1.3e-28 130.2 139 50.4
C04p57310 Brassica napus HOM05D004091 ORTHO05D004581 1.3e-28 130.2 139 51.1
BolC3t15510H Brassica oleracea HOM05D004091 ORTHO05D004581 1.3e-28 130.2 139 50.4
Migut.D02289 Erythranthe guttata HOM05D004091 ORTHO05D004581 1.3e-28 130.2 136 50.7
RcHm_v2.0_Chr5g0056871 Rosa chinensis HOM05D004091 ORTHO05D004581 1.7e-28 129.8 141 51.1
HanXRQChr11g0346541 Helianthus annuus HOM05D004091 ORTHO05D004581 2.2e-28 129.4 134 48.5
MBI13_g13834_MAGBIO Magnolia biondii HOM05D004091 ORTHO05D004581 2.9e-28 129.0 137 51.1
DCAR_006116 Daucus carota HOM05D004091 ORTHO05D004581 3.8e-28 128.6 135 48.9
Migut.N02544 Erythranthe guttata HOM05D004091 ORTHO05D004581 3.8e-28 128.6 149 47.7
A04p21360 Brassica napus HOM05D004091 ORTHO05D004581 4.9e-28 128.3 139 50.4
MD03G1127500 Malus domestica HOM05D004091 ORTHO05D004581 6.4e-28 127.9 135 51.9
PSO801G0814 Papaver somniferum HOM05D004091 ORTHO05D004581 6.4e-28 127.9 137 50.4
MD03G1129100 Malus domestica HOM05D004091 ORTHO05D004581 1.1e-27 127.1 148 51.4
Nitab4.5_0000870g0060 Nicotiana tabacum HOM05D004091 ORTHO05D004581 1.1e-27 127.1 132 51.5
FvH4_3g30650 Fragaria vesca HOM05D004091 ORTHO05D004581 1.4e-27 126.7 141 48.9
Atru.chr3.3512 Acer truncatum HOM05D004091 ORTHO05D004581 1.9e-27 126.3 140 50.0
FAN11G2030 Fragaria x ananassa HOM05D004091 ORTHO05D004581 2.4e-27 125.9 141 48.9
Atru.chr3.3519 Acer truncatum HOM05D004091 ORTHO05D004581 3.2e-27 125.6 87 66.7
Solyc06g051550.4 Solanum lycopersicum HOM05D004091 ORTHO05D004581 3.2e-27 125.6 138 50.0
DCAR_006122 Daucus carota HOM05D004091 ORTHO05D004581 4.2e-27 125.2 137 48.2
FvH4_3g30660 Fragaria vesca HOM05D004091 ORTHO05D004581 5.5e-27 124.8 136 52.9
HanXRQChr11g0346631 Helianthus annuus HOM05D004091 ORTHO05D004581 5.5e-27 124.8 134 50.0
PSO801G0107 Papaver somniferum HOM05D004091 ORTHO05D004581 1.6e-26 123.2 135 48.9
CAN.G2082.3 Capsicum annuum HOM05D004091 ORTHO05D004581 2.1e-26 122.9 137 48.2
Gohir.D09G088575 Gossypium hirsutum HOM05D004091 ORTHO05D004581 3.5e-26 122.1 117 53.0
CANSAT54G0298 Cannabis sativa HOM05D004091 ORTHO05D004581 7.9e-26 120.9 146 49.3
Sed0002152 Sechium edule HOM05D004091 ORTHO05D004581 7.9e-26 120.9 96 59.4
VMungo1127G1339 Vigna mungo HOM05D004091 ORTHO05D004581 1.0e-25 120.6 134 47.8
Lsat_1_v5_gn_1_64640 Lactuca sativa HOM05D004091 ORTHO05D004581 1.8e-25 119.8 134 47.8
Lj2C1007G8 Lonicera japonica HOM05D004091 ORTHO05D004581 2.3e-25 119.4 94 61.7
HanXRQChr01g0019641 Helianthus annuus HOM05D004091 ORTHO05D004581 1.5e-24 116.7 135 48.1
HanXRQChr11g0346551 Helianthus annuus HOM05D004091 ORTHO05D004581 1.5e-24 116.7 134 46.3
FAN21G0713 Fragaria x ananassa HOM05D004091 ORTHO05D004581 4.3e-24 115.2 147 47.6
Ciclev10029810m.g Citrus clementina HOM05D004091 ORTHO05D004581 5.6e-24 114.8 133 50.4
HanXRQChr11g0346601 Helianthus annuus HOM05D004091 ORTHO05D004581 2.8e-23 112.5 134 43.3
Glyma.12G081200 Glycine max HOM05D004091 ORTHO05D004581 6.2e-23 111.3 121 47.9
SalBow6G6360 Salvia bowleyana HOM05D004091 ORTHO05D004581 8.2e-23 110.9 139 44.6
ECA248G3340 Erigeron canadensis HOM05D004091 ORTHO05D004581 3.1e-22 109.0 140 45.7
PSO063G6410 Papaver somniferum HOM05D004091 ORTHO05D004581 3.1e-22 109.0 137 46.0
Ah.01g003340 Amaranthus hybridus HOM05D004091 ORTHO05D004581 3.4e-21 105.5 108 50.9
PSO801G0681 Papaver somniferum HOM05D004091 ORTHO05D004581 4.5e-21 105.1 141 44.7
MD03G1127600 Malus domestica HOM05D004091 ORTHO05D004581 1.7e-20 103.2 119 51.3
RcHm_v2.0_Chr5g0056881 Rosa chinensis HOM05D004091 ORTHO05D004581 2.2e-20 102.8 92 58.7
SalBow3G2912 Salvia bowleyana HOM05D004091 ORTHO05D004581 2.9e-20 102.4 139 42.4
DCAR_032197 Daucus carota HOM05D004091 ORTHO05D004581 2.1e-18 96.3 90 51.1
ClCG02G021600 Citrullus lanatus HOM05D004091 ORTHO05D004581 6.0e-18 94.7 113 49.6
Peaxi162Scf00530g00066 Petunia axillaris HOM05D004091 ORTHO05D004581 2.3e-17 92.8 90 46.7
ATR0329G004 Amborella trichopoda HOM05D004091 ORTHO05D004581 3.9e-17 92.0 139 37.4
CDE04G2019 Ceratophyllum demersum HOM05D004091 ORTHO05D004581 1.6e-15 86.7 98 42.9
Hund01519 Selenicereus undatus HOM05D004091 ORTHO05D004581 2.4e-14 82.8 99 43.4
PSO339G2885 Papaver somniferum HOM05D004091 ORTHO05D004581 1.7e-12 76.6 135 36.3
HPP92_023195 Vanilla planifolia HOM05D004091 ORTHO05D004581 4.6e-10 68.6 140 37.1
unitig_899.g15363 Utricularia gibba HOM05D004091 ORTHO05D004581 2.0e-08 63.2 143 32.2
ATR0329G051 Amborella trichopoda HOM05D004091 ORTHO05D004581 2.5e-08 62.8 108 36.1
SEGI_19676 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 4.8e-07 58.5 144 31.2
SEGI_20940 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 4.8e-07 58.5 144 31.2
SEGI_39635 Sequoiadendron giganteum HOM05D000884 ORTHO05D004581 6.9e-06 54.7 95 32.6


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