Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 4.7e-64 247.7 123 100.0
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 1.4e-36 156.4 93 79.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.2e-30 136.7 78 80.8
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 2.2e-29 132.5 89 73.0
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.1e-28 130.2 72 84.7
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.2e-27 126.7 90 71.1
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 3.5e-27 125.2 85 70.6
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 3.5e-27 125.2 85 68.2
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 7.9e-27 124.0 85 67.1
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 5.1e-26 121.3 85 68.2
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.9e-25 119.4 87 67.8
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 3.3e-25 118.6 83 71.1
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 4.3e-25 118.2 85 67.1
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.3e-25 118.2 85 65.9
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.3e-25 118.2 85 65.9
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 4.3e-25 118.2 85 65.9
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 7.4e-25 117.5 86 66.3
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.3e-24 116.7 89 59.6
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.6e-24 116.3 83 69.9
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.8e-24 115.5 82 70.7
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 2.8e-24 115.5 86 64.0
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 2.8e-24 115.5 85 64.7
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.7e-24 115.2 82 67.1
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 6.3e-24 114.4 83 67.5
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.4e-23 113.2 85 62.4
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-23 112.8 83 66.3
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-23 112.8 83 66.3
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.4e-23 112.5 90 60.0
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.4e-23 112.5 85 63.5
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 4.1e-23 111.7 83 67.5
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 5.3e-23 111.3 81 66.7
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 6.9e-23 110.9 90 58.9
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.6e-22 109.0 90 55.6
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 2.6e-22 109.0 85 62.4
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 3.4e-22 108.6 90 56.7
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 5.9e-22 107.8 83 62.7
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 5.9e-22 107.8 78 66.7
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 7.6e-22 107.5 92 59.8
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.3e-21 106.7 90 56.7
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 1.3e-21 106.7 87 63.2
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.7e-21 106.3 90 55.6
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.7e-21 106.3 81 61.7
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 2.9e-21 105.5 90 54.4
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 2.9e-21 105.5 90 54.4
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 2.9e-21 105.5 85 60.0
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.9e-21 105.5 85 60.0
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.9e-21 105.5 85 60.0
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 3.8e-21 105.1 89 58.4
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 3.8e-21 105.1 85 58.8
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 6.5e-21 104.4 82 63.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.1e-20 103.6 89 58.4
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.1e-20 103.6 89 55.1
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.4e-20 103.2 86 59.3
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.9e-20 102.8 89 55.1
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.9e-20 102.8 81 60.5
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.5e-20 102.4 81 59.3
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 2.5e-20 102.4 89 53.9
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 3.2e-20 102.1 81 63.0
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 3.2e-20 102.1 90 54.4
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.2e-20 102.1 85 60.0
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 5.5e-20 101.3 72 62.5
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 5.5e-20 101.3 90 53.3
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 7.2e-20 100.9 85 56.5
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.6e-19 99.8 90 56.7
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 1.6e-19 99.8 90 52.2
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 2.7e-19 99.0 85 58.8
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 4.6e-19 98.2 85 58.8
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 4.6e-19 98.2 89 55.1
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 6.1e-19 97.8 90 54.4
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 6.1e-19 97.8 85 57.6
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 7.9e-19 97.4 77 62.3
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.8e-18 96.3 89 52.8
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.3e-18 95.9 90 56.7
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.3e-18 95.9 88 55.7
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 5.1e-18 94.7 81 53.1
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 8.8e-18 94.0 86 59.3
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 1.9e-17 92.8 72 61.1
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 2.5e-17 92.4 89 49.4
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 2.5e-17 92.4 89 50.6
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.3e-17 92.0 89 48.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 4.3e-17 91.7 82 56.1
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.8e-16 89.0 88 53.4
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.7e-16 88.6 72 58.3
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 3.7e-16 88.6 82 52.4
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 4.8e-16 88.2 82 53.7
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 6.3e-16 87.8 82 53.7
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 6.3e-16 87.8 67 58.2
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 1.4e-15 86.7 69 59.4
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.3e-15 84.7 75 57.3
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 1.0e-13 80.5 72 54.2
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.6e-11 73.2 125 35.2
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.6e-11 73.2 125 35.2
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 2.8e-08 62.4 41 65.9
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.4e-07 60.1 86 39.5


User provided reference genes

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