Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.1e-69 265.0 131 100.0
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.2e-45 184.5 100 89.0
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 3.4e-44 181.8 99 89.9
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 7.6e-44 180.6 100 88.0
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.9e-42 176.0 103 83.5
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 3.2e-42 175.3 99 86.9
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 4.6e-41 171.4 100 80.0
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.7e-40 169.5 100 82.0
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 1.7e-40 169.5 100 82.0
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 3.0e-40 168.7 100 81.0
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.1e-39 166.8 100 81.0
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.5e-39 166.4 100 79.0
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 1.5e-39 166.4 101 81.2
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.9e-39 166.0 100 80.0
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 2.5e-39 165.6 100 79.0
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 2.5e-39 165.6 100 75.0
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.6e-39 164.5 100 78.0
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 5.6e-39 164.5 100 78.0
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 7.3e-39 164.1 105 74.3
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.6e-38 162.9 99 77.8
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.6e-38 162.9 99 77.8
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 1.6e-38 162.9 104 76.9
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 2.1e-38 162.5 109 70.6
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 2.8e-38 162.2 101 79.2
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.8e-38 161.4 100 80.0
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 6.2e-38 161.0 100 76.0
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 6.2e-38 161.0 100 76.0
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 6.2e-38 161.0 100 76.0
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 1.1e-37 160.2 100 77.0
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.1e-37 160.2 100 79.0
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.4e-37 159.8 100 77.0
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 2.4e-37 159.1 100 74.0
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 3.1e-37 158.7 100 79.0
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 3.1e-37 158.7 100 79.0
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 4.0e-37 158.3 100 75.0
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 6.9e-37 157.5 100 75.0
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 6.9e-37 157.5 100 74.0
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 1.2e-36 156.8 100 74.0
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.2e-36 156.8 100 75.0
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.2e-36 156.8 100 74.0
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.6e-36 155.6 100 74.0
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.4e-36 155.2 98 78.6
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.4e-36 154.8 100 73.0
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 5.8e-36 154.5 100 73.0
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 5.8e-36 154.5 100 73.0
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 9.9e-36 153.7 100 72.0
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.3e-35 153.3 99 75.8
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.7e-35 152.9 100 73.0
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 2.9e-35 152.1 100 74.0
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 4.9e-35 151.4 99 74.7
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 4.9e-35 151.4 101 71.3
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.4e-35 151.0 100 72.0
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 1.1e-34 150.2 111 66.7
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.1e-34 150.2 100 72.0
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.1e-34 150.2 104 73.1
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.4e-34 149.8 100 71.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.9e-34 149.4 100 73.0
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.9e-34 149.4 100 73.0
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.4e-34 149.1 103 72.8
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.4e-34 149.1 101 71.3
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 5.4e-34 147.9 100 70.0
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 7.1e-34 147.5 100 71.0
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 9.3e-34 147.1 100 71.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 9.3e-34 147.1 100 70.0
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.6e-33 146.4 100 74.0
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 1.6e-33 146.4 111 64.9
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.6e-33 146.4 100 70.0
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 2.1e-33 146.0 100 69.0
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.7e-33 145.6 100 69.0
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 3.5e-33 145.2 100 70.0
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 4.6e-33 144.8 100 68.0
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 4.6e-33 144.8 100 68.0
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 7.9e-33 144.1 100 70.0
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.7e-32 142.9 100 70.0
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 3.9e-32 141.7 99 68.7
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 5.1e-32 141.4 100 66.0
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 6.6e-32 141.0 100 67.0
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 1.3e-30 136.7 103 61.2
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 4.8e-30 134.8 100 65.0
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.8e-29 132.9 100 64.0
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.8e-29 132.9 101 65.3
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.2e-28 130.2 100 62.0
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 3.4e-28 128.6 101 62.4
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 8.4e-27 124.0 99 56.6
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 1.2e-25 120.2 100 56.0
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.2e-25 120.2 99 55.6
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.6e-23 111.3 87 63.2
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 3.1e-21 105.5 99 51.5
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 5.8e-20 101.3 99 50.5
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 2.7e-17 92.4 98 54.1
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 3.5e-17 92.0 68 61.8
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.0e-16 90.5 108 45.4
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 2.3e-16 89.4 93 47.3
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 6.7e-16 87.8 50 74.0
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 1.2e-09 67.0 49 69.4
AT4G10843 Arabidopsis thaliana HOM05D004110 ORTHO05D038727 5.1e-08 61.6 97 38.1


User provided reference genes

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