Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.2e-88 328.9 170 100.0
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.8e-58 229.6 195 67.7
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 9.2e-58 227.3 193 67.9
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 2.3e-56 222.6 192 65.1
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 2.3e-56 222.6 192 65.1
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.2e-54 216.9 192 66.7
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.1e-54 216.1 190 65.3
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 3.6e-54 215.3 191 63.9
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 8.0e-54 214.2 190 64.7
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.8e-53 213.0 186 62.9
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.6e-52 209.1 187 64.2
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 7.5e-52 207.6 189 63.5
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.2e-51 206.1 181 68.0
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 3.7e-51 205.3 197 60.4
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 6.4e-51 204.5 197 61.4
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 8.3e-51 204.1 191 60.2
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.4e-50 203.4 190 61.6
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.4e-50 203.4 192 60.4
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.8e-50 203.0 177 65.5
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.8e-50 203.0 190 61.6
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.4e-50 202.6 188 62.2
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 5.4e-50 201.4 190 61.1
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 7.0e-50 201.1 190 61.1
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 1.2e-49 200.3 200 59.5
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.6e-49 199.9 190 62.1
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 5.9e-49 198.0 190 60.5
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 5.9e-49 198.0 190 61.1
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 7.8e-49 197.6 198 57.1
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 6.6e-48 194.5 192 59.9
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 6.6e-48 194.5 186 58.6
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 6.6e-48 194.5 194 59.3
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.5e-47 193.4 185 57.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 3.3e-47 192.2 189 60.8
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 3.3e-47 192.2 192 56.8
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.3e-47 191.8 188 57.4
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 4.3e-47 191.8 188 57.4
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 9.5e-47 190.7 193 59.1
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 9.5e-47 190.7 195 56.9
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.2e-46 190.3 200 56.5
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.8e-46 189.1 193 59.1
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 3.6e-46 188.7 189 59.8
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.6e-46 188.7 193 59.6
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.0e-45 187.2 195 55.9
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.0e-45 187.2 189 56.6
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.0e-45 187.2 192 58.9
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.8e-45 186.4 194 56.2
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.3e-45 186.0 197 56.9
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-45 186.0 192 59.9
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 3.1e-45 185.7 197 57.4
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 3.1e-45 185.7 185 57.8
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.1e-45 185.7 197 56.9
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 8.9e-45 184.1 192 56.8
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.2e-44 183.7 189 56.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.2e-44 183.7 200 56.0
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.5e-44 183.3 192 59.4
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.5e-44 183.3 197 56.9
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 2.0e-44 183.0 197 55.8
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 2.6e-44 182.6 182 56.6
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 2.6e-44 182.6 194 55.7
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.6e-44 182.6 186 56.5
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 3.4e-44 182.2 182 59.3
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 4.4e-44 181.8 191 56.0
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 5.8e-44 181.4 190 58.4
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 5.8e-44 181.4 186 54.8
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 9.8e-44 180.6 190 56.3
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.3e-43 180.3 194 52.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.3e-43 180.3 189 55.0
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.1e-42 177.2 193 54.9
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 5.4e-42 174.9 189 55.0
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 9.2e-42 174.1 191 56.0
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 3.5e-41 172.2 188 53.2
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 7.8e-41 171.0 188 53.7
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 5.0e-40 168.3 188 53.7
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.1e-39 167.2 193 51.3
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.9e-39 166.4 192 52.6
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.5e-39 166.0 212 50.0
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.2e-38 163.7 173 56.6
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 2.1e-38 162.9 191 49.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 1.8e-37 159.8 177 52.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.1e-37 159.1 196 51.5
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.1e-37 159.1 184 48.9
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 3.1e-37 159.1 194 50.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 3.1e-37 159.1 194 50.0
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 4.0e-37 158.7 184 51.1
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.2e-37 158.3 184 51.6
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 6.8e-37 157.9 189 50.8
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 6.8e-37 157.9 181 53.6
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 1.2e-36 157.1 177 54.2
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 1.5e-36 156.8 183 50.8
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.5e-36 156.8 189 49.7
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.5e-36 156.8 185 50.3
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 3.4e-36 155.6 181 54.1
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 7.5e-36 154.5 147 62.6
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-35 153.7 185 49.7
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.3e-35 153.7 170 51.8
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.7e-35 153.3 192 50.5
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.9e-35 152.5 184 48.9
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.9e-34 149.8 194 49.5
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 4.1e-34 148.7 127 66.1
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 1.6e-33 146.7 186 45.2
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 1.6e-33 146.7 186 45.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.6e-33 146.7 147 58.5
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.1e-33 146.4 185 47.6
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.0e-32 144.1 182 47.3
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.0e-32 144.1 175 49.7
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 5.1e-32 141.7 186 44.6
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 8.6e-32 141.0 196 43.9
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 8.6e-32 141.0 145 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 2.5e-31 139.4 188 43.1
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.5e-31 139.4 213 43.7
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.1e-30 136.3 83 83.1
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.1e-30 136.3 83 81.9
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.7e-30 135.2 83 80.7
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.4e-29 133.7 207 41.1
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.3e-27 127.1 80 85.0
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 2.2e-27 126.3 163 45.4
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 3.8e-27 125.6 188 42.0
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 6.4e-27 124.8 143 54.5
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 4.6e-25 118.6 184 38.0
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.1e-23 114.0 205 40.0
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.5e-23 113.6 133 52.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.9e-23 113.2 185 37.8
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.0e-21 105.5 109 62.4
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 3.4e-20 102.4 137 46.7
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 5.8e-20 101.7 97 57.7
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 6.4e-19 98.2 90 60.0
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 8.4e-19 97.8 149 43.0
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 8.4e-19 97.8 111 55.9
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.2e-17 94.0 137 44.5
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 3.9e-16 89.0 59 78.0
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 5.1e-16 88.6 61 78.7
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 9.6e-15 84.3 110 48.2
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.8e-13 80.1 110 50.0
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 9.0e-13 77.8 99 47.5
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 4.9e-11 72.0 45 80.0
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 6.4e-11 71.6 77 57.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 5.4e-10 68.6 166 31.9
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 9.3e-10 67.8 81 54.3
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.8e-08 63.5 41 65.9
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 6.2e-06 55.1 40 62.5


User provided reference genes

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