Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014122 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 4.7e-166 588.2 393 100.0
CSS0026269 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 4.7e-166 588.2 393 100.0
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 3.5e-68 263.1 390 63.3
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 1.4e-56 224.6 382 55.0
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 9.8e-55 218.4 377 54.4
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 2.8e-49 200.3 374 46.8
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 1.4e-48 198.0 382 48.7
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 7.5e-47 192.2 375 41.1
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 7.5e-47 192.2 374 49.5
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 1.3e-46 191.4 382 41.9
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 3.5e-44 183.3 418 51.2
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 4.6e-44 183.0 392 39.3
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 3.9e-43 179.9 380 38.4
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 9.5e-42 175.3 382 53.9
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 1.6e-41 174.5 380 53.7
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 2.1e-41 174.1 326 48.8
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 4.0e-40 169.9 390 35.6
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 8.9e-40 168.7 374 42.2
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 1.2e-39 168.3 377 47.5
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 2.0e-39 167.5 390 49.0
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 3.4e-39 166.8 386 49.0
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 9.9e-39 165.2 142 74.6
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 1.3e-38 164.9 153 68.6
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 8.4e-38 162.2 400 38.5
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 2.4e-37 160.6 409 44.5
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 2.4e-37 160.6 379 52.8
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 2.4e-37 160.6 437 38.9
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 7.1e-37 159.1 381 37.3
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 9.2e-37 158.7 376 50.3
QL12p007207 Quercus lobata HOM05D004380 ORTHO05D005134 9.2e-37 158.7 330 47.9
Lsat_1_v5_gn_3_2421 Lactuca sativa HOM05D004380 ORTHO05D005134 1.6e-36 157.9 140 72.1
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 1.6e-36 157.9 377 42.7
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 4.6e-36 156.4 381 49.9
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 7.8e-36 155.6 411 40.4
Haze_08308 Corylus avellana HOM05D004380 ORTHO05D005134 1.7e-35 154.5 376 50.0
Oeu037610.2 Olea europaea HOM05D004380 ORTHO05D005134 1.7e-35 154.5 376 43.9
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 2.3e-35 154.1 378 51.3
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 2.3e-35 154.1 141 65.2
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 2.3e-35 154.1 141 67.4
Sc22g0001370 Simmondsia chinensis HOM05D004380 ORTHO05D005134 3.9e-35 153.3 430 46.5
Haze_13061 Corylus avellana HOM05D000001 ORTHO05D010365 6.6e-35 152.5 151 68.2
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 1.5e-34 151.4 377 40.6
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 3.3e-34 150.2 439 39.9
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 4.3e-34 149.8 142 65.5
Hund11272 Selenicereus undatus HOM05D004380 ORTHO05D005134 9.6e-34 148.7 144 66.0
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 1.6e-33 147.9 386 35.8
MELO3C024775.2 Cucumis melo HOM05D004380 ORTHO05D005134 2.8e-33 147.1 387 37.5
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 4.7e-33 146.4 139 68.3
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 4.7e-33 146.4 139 68.3
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 6.2e-33 146.0 389 45.0
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 8.1e-33 145.6 139 68.3
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 1.1e-32 145.2 391 46.8
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 1.4e-32 144.8 177 56.5
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 1.8e-32 144.4 438 37.9
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 1.8e-32 144.4 351 48.1
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 2.4e-32 144.1 153 64.1
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 4.0e-32 143.3 149 63.1
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 1.2e-31 141.7 383 37.1
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 1.5e-31 141.4 173 57.2
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 3.4e-31 140.2 387 44.7
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 2.9e-30 137.1 166 55.4
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 4.9e-30 136.3 401 39.9
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 4.9e-30 136.3 411 37.2
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 6.4e-30 136.0 153 54.2
Ca_23634_v3 Cicer arietinum L. HOM05D000346 ORTHO05D000326 1.4e-29 134.8 383 41.3
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 1.9e-29 134.4 382 44.2
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 1.9e-29 134.4 133 64.7
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 5.4e-29 132.9 381 43.6
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 7.1e-29 132.5 332 44.0
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 1.2e-28 131.7 340 35.0
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 1.6e-28 131.3 110 70.9
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 2.1e-28 131.0 144 65.3
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 2.7e-28 130.6 146 51.4
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 2.7e-28 130.6 153 52.9
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 3.5e-28 130.2 139 64.7
SHI10270 Sapria himalayana HOM05D004380 ORTHO05D005134 7.8e-28 129.0 136 63.2
AUR62018778 Chenopodium quinoa HOM05D004380 ORTHO05D005134 2.3e-27 127.5 342 46.5
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 3.9e-27 126.7 154 50.6
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 3.9e-27 126.7 376 35.6
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 5.1e-27 126.3 140 50.7
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 6.6e-27 125.9 141 54.6
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 8.7e-27 125.6 154 50.6
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 1.1e-26 125.2 139 63.3
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 1.9e-26 124.4 146 64.4
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 2.5e-26 124.0 154 50.0
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 2.5e-26 124.0 145 59.3
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.5e-26 124.0 145 59.3
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 3.3e-26 123.6 365 42.7
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 4.3e-26 123.2 147 57.8
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 5.6e-26 122.9 411 39.9
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 5.6e-26 122.9 388 34.5
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 1.6e-25 121.3 147 51.7
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 3.6e-25 120.2 147 57.1
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 6.2e-25 119.4 414 45.2
Zm00001eb400590 Zea mays HOM05D004380 ORTHO05D005134 9.0e-24 115.5 149 45.0
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 2.0e-23 114.4 159 53.5
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 7.6e-23 112.5 138 52.2
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 1.3e-22 111.7 152 48.0
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 3.8e-22 110.2 323 45.5
TPR.G22617 Trifolium pratense HOM05D004380 ORTHO05D005134 1.8e-19 101.3 287 40.8
Potri.001G147100 Populus trichocarpa HOM05D004380 ORTHO05D005134 4.3e-18 96.7 104 51.9
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 7.4e-18 95.9 139 51.1
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 1.6e-17 94.7 370 41.4
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 6.9e-16 89.4 136 54.4
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 5.8e-15 86.3 254 31.5
HPP92_020129 Vanilla planifolia HOM05D004380 ORTHO05D005134 2.2e-14 84.3 109 45.0
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 3.2e-13 80.5 106 41.5
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 1.0e-11 75.5 135 37.0
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 1.8e-11 74.7 64 62.5
Medtr8g446970 Medicago truncatula HOM05D004380 ORTHO05D005134 3.0e-11 73.9 68 55.9
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 1.5e-10 71.6 141 36.2
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 2.8e-09 67.4 99 46.5
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 3.7e-09 67.0 306 46.1
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 5.3e-08 63.2 73 45.2
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 5.3e-08 63.2 97 44.3
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 3.8e-06 57.0 58 55.2


User provided reference genes

Program Settings