Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014003 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 8.5e-48 193.4 99 100.0
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 2.6e-28 128.6 90 76.7
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 3.4e-28 128.3 91 74.7
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 5.7e-28 127.5 90 77.8
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 7.5e-28 127.1 91 71.4
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 2.2e-27 125.6 90 73.3
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 1.1e-26 123.2 94 64.9
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 1.1e-26 123.2 94 70.2
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 5.4e-26 120.9 90 67.8
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 2.3e-24 115.5 103 58.3
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 3.0e-24 115.2 90 64.4
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 3.9e-24 114.8 90 65.6
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 8.6e-24 113.6 90 64.4
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.1e-23 113.2 90 64.4
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 2.5e-23 112.1 91 62.6
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 5.6e-23 110.9 91 61.5
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.6e-22 109.4 90 62.2
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 2.1e-22 109.0 90 61.1
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 6.2e-22 107.5 125 48.8
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.1e-21 106.7 94 57.4
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.8e-21 105.9 90 61.1
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 2.3e-21 105.5 90 60.0
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.5e-20 102.8 91 60.4
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 1.5e-20 102.8 89 60.7
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 2.0e-20 102.4 90 58.9
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 2.0e-20 102.4 91 57.1
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.6e-20 102.1 88 58.0
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.4e-20 101.7 91 59.3
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 3.4e-20 101.7 92 55.4
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 5.8e-20 100.9 90 60.0
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 5.8e-20 100.9 91 58.2
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 9.8e-20 100.1 94 57.4
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 9.8e-20 100.1 90 57.8
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.7e-19 99.4 91 57.1
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.7e-19 99.4 91 57.1
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 2.2e-19 99.0 89 55.1
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.2e-19 99.0 89 58.4
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.2e-19 99.0 90 57.8
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.9e-19 98.6 89 58.4
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 2.9e-19 98.6 91 59.3
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 2.9e-19 98.6 94 55.3
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 3.7e-19 98.2 90 57.8
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 3.7e-19 98.2 91 59.3
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 3.7e-19 98.2 96 58.3
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 4.9e-19 97.8 91 56.0
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 6.4e-19 97.4 91 58.2
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.4e-19 97.4 91 58.2
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.4e-19 97.4 91 58.2
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 6.4e-19 97.4 91 58.2
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.3e-19 97.1 91 56.0
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 1.1e-18 96.7 94 54.3
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 1.1e-18 96.7 95 53.7
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.9e-18 95.9 91 52.7
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.9e-18 95.9 91 56.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.9e-18 95.9 91 56.0
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 1.9e-18 95.9 91 54.9
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 1.9e-18 95.9 91 56.0
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 2.4e-18 95.5 90 56.7
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 2.4e-18 95.5 90 56.7
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 2.4e-18 95.5 91 56.0
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 3.2e-18 95.1 92 52.2
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 4.1e-18 94.7 90 51.1
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 9.2e-18 93.6 90 52.2
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 1.2e-17 93.2 90 55.6
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.6e-17 92.8 91 54.9
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.7e-17 92.0 92 50.0
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 7.8e-17 90.5 87 57.5
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.0e-16 90.1 90 48.9
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 2.3e-16 89.0 90 50.0
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 3.0e-16 88.6 90 48.9
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 6.6e-16 87.4 89 52.8
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 1.1e-15 86.7 91 48.4
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 5.6e-15 84.3 89 49.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 5.6e-15 84.3 89 49.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.2e-14 83.2 90 47.8
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 1.2e-14 83.2 90 47.8
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 6.2e-14 80.9 90 44.4
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.1e-13 80.1 140 37.1
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.2e-12 76.6 90 44.4
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 3.4e-12 75.1 90 45.6
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 8.3e-11 70.5 91 44.0
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 2.4e-10 68.9 42 71.4
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 3.2e-10 68.6 66 53.0
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 6.0e-09 64.3 159 28.9
SHI05692 Sapria himalayana HOM05D004110 ORTHO05D004810 1.0e-08 63.5 40 62.5
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 2.3e-08 62.4 94 37.2
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.1e-07 60.1 96 37.5
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 1.9e-07 59.3 94 34.0
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 3.6e-06 55.1 81 39.5
FAN24G1876 Fragaria x ananassa HOM05D000827 ORTHO05D001318 6.2e-06 54.3 43 55.8


User provided reference genes

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