Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013959 Camellia sinensis var. sinensis HOM05D002927 ORTHO05D003841 9.2e-101 370.2 178 100.0
SalBow2G0578 Salvia bowleyana HOM05D002927 ORTHO05D003841 5.8e-55 218.0 108 96.3
Sabra03G0032300 Salix brachista HOM05D002927 ORTHO05D003841 3.8e-54 215.3 123 83.7
MSTRG.11092 Avicennia marina HOM05D002927 ORTHO05D003841 4.9e-54 214.9 106 97.2
SGA_v2.0_scaffold37G14805 Striga asiatica HOM05D002927 ORTHO05D003841 4.9e-54 214.9 106 97.2
GSVIVG01017154001 Vitis vinifera HOM05D002927 ORTHO05D003841 4.9e-54 214.9 106 97.2
Actinidia01792 Actinidia chinensis HOM05D002927 ORTHO05D003841 6.4e-54 214.5 104 99.0
AUR62016429 Chenopodium quinoa HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 96.2
Lsat_1_v5_gn_4_103500 Lactuca sativa HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 96.2
Manes.11G052000 Manihot esculenta HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 96.2
Sc12g0009150 Simmondsia chinensis HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 97.2
TWI75G0487 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 96.2
vmacro18935 Vaccinium macrocarpon HOM05D002927 ORTHO05D003841 1.1e-53 213.8 106 96.2
EL10Ac9g21989 Beta vulgaris HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 96.2
AUR62011613 Chenopodium quinoa HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 96.2
Migut.I00844 Erythranthe guttata HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 95.3
Lsat_1_v5_gn_5_129901 Lactuca sativa HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 96.2
MD09G1215200 Malus domestica HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 95.3
MD17G1197900 Malus domestica HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 95.3
Prupe.3G074300 Prunus persica HOM05D002927 ORTHO05D003841 1.9e-53 213.0 106 95.3
Glyma.15G013000 Glycine max HOM05D002927 ORTHO05D003841 2.4e-53 212.6 106 96.2
Gohir.D05G128300 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.4e-53 212.6 106 95.3
Gorai.009G132500 Gossypium raimondii HOM05D002927 ORTHO05D003841 2.4e-53 212.6 106 95.3
Nn8g39281 Nelumbo nucifera HOM05D002927 ORTHO05D003841 2.4e-53 212.6 106 96.2
RcHm_v2.0_Chr2g0137391 Rosa chinensis HOM05D002927 ORTHO05D003841 2.4e-53 212.6 106 95.3
Gohir.A02G122600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 3.2e-53 212.2 106 96.2
Gohir.D10G072550 Gossypium hirsutum HOM05D002927 ORTHO05D003841 3.2e-53 212.2 106 95.3
Gorai.011G078200 Gossypium raimondii HOM05D002927 ORTHO05D003841 3.2e-53 212.2 106 95.3
Oeu063956.1 Olea europaea HOM05D002927 ORTHO05D003841 3.2e-53 212.2 106 95.3
Dinv38060 Davidia involucrata HOM05D002927 ORTHO05D003841 4.2e-53 211.8 106 95.3
Hma1.2p1_0682F.1_g202640 Hydrangea macrophylla HOM05D002927 ORTHO05D003841 4.2e-53 211.8 106 95.3
Oeu033496.1 Olea europaea HOM05D002927 ORTHO05D003841 4.2e-53 211.8 104 97.1
Rhsim08G0218500 Rhododendron simsii HOM05D002927 ORTHO05D003841 4.2e-53 211.8 106 95.3
Aqoxy7G01853 Aquilegia oxysepala HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
MSTRG.22704 Avicennia marina HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Ca_01105_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
ClCG09G002330 Citrullus lanatus HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Glyma.07G034300 Glycine max HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Glyma.08G207800 Glycine max HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Medtr2g102435 Medicago truncatula HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
PGR102G2510 Punica granatum HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Sed0022010 Sechium edule HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
TPR.G37235 Trifolium pratense HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
TAR624G0871 Trochodendron aralioides HOM05D002927 ORTHO05D003841 5.4e-53 211.5 106 95.3
Ah.01g020990 Amaranthus hybridus HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
arahy.Tifrunner.gnm1.ann1.A9FW4X Arachis hypogaea HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
arahy.Tifrunner.gnm1.ann1.QQR1AK Arachis hypogaea HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
Duzib235G0335 Durio zibethinus HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
Eucgr.F03005 Eucalyptus grandis HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
Glyma.13G360900 Glycine max HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
HanXRQChr10g0314931 Helianthus annuus HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
HanXRQChr16g0501061 Helianthus annuus HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
Nitab4.5_0003159g0060 Nicotiana tabacum HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
Peaxi162Scf00207g00840 Petunia axillaris HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
Phvul.010G151600 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
Potri.001G178000 Populus trichocarpa HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
Sabra01G0148600 Salix brachista HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 94.3
VMungo0331G1773 Vigna mungo HOM05D002927 ORTHO05D003841 7.1e-53 211.1 106 95.3
Atru.chr1.3222 Acer truncatum HOM05D002927 ORTHO05D003841 9.3e-53 210.7 106 94.3
Gohir.D03G073700 Gossypium hirsutum HOM05D002927 ORTHO05D003841 9.3e-53 210.7 107 94.4
Potri.003G056700 Populus trichocarpa HOM05D002927 ORTHO05D003841 9.3e-53 210.7 106 94.3
Sed0021699 Sechium edule HOM05D002927 ORTHO05D003841 9.3e-53 210.7 106 95.3
TWI12G0585 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 9.3e-53 210.7 106 94.3
CANSAT56G4360 Cannabis sativa HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Cfa002048 Carpinus fangiana HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Ciclev10024839m.g Citrus clementina HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 93.4
COL.COLO4_30327 Corchorus olitorius HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 93.4
MELO3C023369.2 Cucumis melo HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
CsaV3_7G032990 Cucumis sativus L. HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Dinv30530 Davidia involucrata HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 95.3
PSO063G0077 Papaver somniferum HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
PSO782G4571 Papaver somniferum HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Psat5g299320 Pisum sativum HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Solyc03g120350.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Sopen03g039240 Solanum pennellii HOM05D002927 ORTHO05D003841 1.2e-52 210.3 106 94.3
Cpa.g.sc10.165 Carica papaya HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 93.4
CDE07G0468 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 94.3
Ca_20406_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 94.3
Haze_16459 Corylus avellana HOM05D002927 ORTHO05D003841 1.6e-52 209.9 104 96.2
DCAR_016229 Daucus carota HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 93.4
Phvul.005G172700 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 94.3
SHI09685 Sapria himalayana HOM05D002927 ORTHO05D003841 1.6e-52 209.9 104 96.2
TPR.G24164 Trifolium pratense HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 94.3
VMungo1080G1114 Vigna mungo HOM05D002927 ORTHO05D003841 1.6e-52 209.9 106 95.3
ATR0037G015 Amborella trichopoda HOM05D002927 ORTHO05D003841 2.1e-52 209.5 106 94.3
Peaxi162Scf00015g00253 Petunia axillaris HOM05D002927 ORTHO05D003841 2.1e-52 209.5 106 94.3
HPP92_003639 Vanilla planifolia HOM05D002927 ORTHO05D003841 2.1e-52 209.5 106 94.3
CiPaw.01G240700 Carya illinoinensis HOM05D002927 ORTHO05D003841 2.7e-52 209.1 106 93.4
Gohir.A05G127400 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.7e-52 209.1 106 94.3
Psat7g253400 Pisum sativum HOM05D002927 ORTHO05D003841 2.7e-52 209.1 106 93.4
CAN.G438.51 Capsicum annuum HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 94.3
Thhalv10018100m.g Eutrema salsugineum HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 92.5
Lj3g0020255 Lotus japonicus HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 93.4
Lalb_Chr25g0279601 Lupinus albus HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 93.4
Os01g0617500 Oryza sativa ssp. japonica HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 93.4
PGSC0003DMG400002639 Solanum tuberosum HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 93.4
Zm00001eb159790 Zea mays HOM05D002927 ORTHO05D003841 3.5e-52 208.8 106 93.4
ECA234G1721 Erigeron canadensis HOM05D002927 ORTHO05D003841 4.6e-52 208.4 106 93.4
FAN05G2514 Fragaria x ananassa HOM05D002927 ORTHO05D003841 4.6e-52 208.4 106 93.4
FAN09G4597 Fragaria x ananassa HOM05D002927 ORTHO05D003841 4.6e-52 208.4 106 93.4
FAN14G3898 Fragaria x ananassa HOM05D002927 ORTHO05D003841 4.6e-52 208.4 106 93.4
Medtr4g011890 Medicago truncatula HOM05D002927 ORTHO05D003841 4.6e-52 208.4 106 93.4
BcaC03g15969 Brassica carinata HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 92.5
A02p23570 Brassica napus HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 92.5
C02p37340 Brassica napus HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 92.5
BolC2t09744H Brassica oleracea HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 92.5
BraA02t07350Z Brassica rapa HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 92.5
HanXRQChr14g0455941 Helianthus annuus HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 93.4
Nitab4.5_0003885g0030 Nicotiana tabacum HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 93.4
THA.LOC104808208 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 6.0e-52 208.0 106 93.4
ECA232G1494 Erigeron canadensis HOM05D002927 ORTHO05D003841 7.9e-52 207.6 106 93.4
Solyc06g066790.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 7.9e-52 207.6 106 92.5
Sopen06g025070 Solanum pennellii HOM05D002927 ORTHO05D003841 7.9e-52 207.6 106 92.5
THA.LOC104812472 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 7.9e-52 207.6 106 92.5
Aa31LG4G680 Aethionema arabicum HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
AL2G41090 Arabidopsis lyrata HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
AT1G80410 Arabidopsis thaliana HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
Carub.0002s2716 Capsella rubella HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
CAN.G395.20 Capsicum annuum HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
DCAR_021318 Daucus carota HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 91.5
FAN02G2217 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 92.5
Thecc.06G082500 Theobroma cacao HOM05D002927 ORTHO05D003841 1.0e-51 207.2 106 93.4
CiPaw.02G152400 Carya illinoinensis HOM05D002927 ORTHO05D003841 1.3e-51 206.8 106 92.5
Cc04_g03600 Coffea canephora HOM05D002927 ORTHO05D003841 1.8e-51 206.5 106 92.5
Lalb_Chr14g0373541 Lupinus albus HOM05D002927 ORTHO05D003841 1.8e-51 206.5 106 92.5
THA.LOC104813572 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 1.8e-51 206.5 106 92.5
TAR383G0846 Trochodendron aralioides HOM05D002927 ORTHO05D003841 2.3e-51 206.1 106 93.4
BcaB02g07275 Brassica carinata HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
BcaC08g45310 Brassica carinata HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
BcaC08g47587 Brassica carinata HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
A07p26660 Brassica napus HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
C06p29140 Brassica napus HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
C06p54110 Brassica napus HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
BolC6t38078H Brassica oleracea HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
BraA07t30309Z Brassica rapa HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 90.6
CARHR074830 Cardamine hirsuta HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
Lj3g0010300 Lotus japonicus HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
Sp5g35400 Schrenkiella parvula HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
unitig_21.g20350 Utricularia gibba HOM05D002927 ORTHO05D003841 5.1e-51 204.9 106 91.5
Lalb_Chr24g0395741 Lupinus albus HOM05D002927 ORTHO05D003841 1.1e-50 203.8 106 91.5
BolC6t40424H Brassica oleracea HOM05D002927 ORTHO05D003841 1.5e-50 203.4 106 90.6
BraA07t32030Z Brassica rapa HOM05D002927 ORTHO05D003841 2.5e-50 202.6 106 90.6
A07p45260 Brassica napus HOM05D002927 ORTHO05D003841 4.3e-50 201.8 106 90.6
Mapoly0079s0051 Marchantia polymorpha HOM05D002927 ORTHO05D003841 5.6e-50 201.4 104 90.4
Duzib158G0002 Durio zibethinus HOM05D002927 ORTHO05D003841 7.4e-50 201.1 106 92.5
Nitab4.5_0000351g0230 Nicotiana tabacum HOM05D002927 ORTHO05D003841 7.4e-50 201.1 120 82.5
Nitab4.5_0002327g0070 Nicotiana tabacum HOM05D002927 ORTHO05D003841 7.4e-50 201.1 120 82.5
SMO364G0531 Selaginella moellendorffii HOM05D002927 ORTHO05D003841 4.8e-49 198.4 109 87.2
Pp3c10_20750 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.8e-48 196.4 106 86.8
CBR_g51323 Chara braunii HOM05D002927 ORTHO05D003841 2.4e-48 196.1 107 86.9
Pp3c4_20560 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.5e-47 193.4 106 84.9
Pp3c3_24080 Physcomitrium patens HOM05D002927 ORTHO05D003841 3.4e-47 192.2 106 84.9
MCO04G539 Micromonas commoda HOM05D002927 ORTHO05D003841 2.9e-38 162.5 105 71.4
Gorai.002G058200 Gossypium raimondii HOM05D002927 ORTHO05D003841 1.1e-37 160.6 78 97.4
Cre06.g278225 Chlamydomonas reinhardtii HOM05D002927 ORTHO05D003841 1.4e-37 160.2 113 69.0
Nn2g11837 Nelumbo nucifera HOM05D002927 ORTHO05D003841 1.2e-36 157.1 80 92.5
FvH4_6g30900 Fragaria vesca HOM05D002927 ORTHO05D003841 2.7e-36 156.0 86 87.2
Gohir.A10G078900 Gossypium hirsutum HOM05D002927 ORTHO05D003841 1.0e-35 154.1 74 97.3
PRCOL_00006302 Prasinoderma coloniale HOM05D002927 ORTHO05D003841 1.8e-35 153.3 113 63.7
Lj9C506T2 Lonicera japonica HOM05D002927 ORTHO05D003841 2.3e-35 152.9 74 95.9
Lj5C63T3 Lonicera japonica HOM05D002927 ORTHO05D003841 3.9e-35 152.1 74 95.9
Hund06600 Selenicereus undatus HOM05D002927 ORTHO05D003841 6.7e-35 151.4 74 95.9
AagrBONN_evm.TU.Sc2ySwM_228.5803 Anthoceros agrestis HOM05D002927 ORTHO05D003841 9.7e-34 147.5 74 91.9
Haze_26772 Corylus avellana HOM05D002927 ORTHO05D003841 6.9e-32 141.4 117 60.7
Glyma.13G027850 Glycine max HOM05D002927 ORTHO05D022232 2.2e-30 136.3 94 74.5
Psat1g029880 Pisum sativum HOM05D002927 ORTHO05D003841 2.1e-28 129.8 66 90.9
Psat7g222840 Pisum sativum HOM05D002927 ORTHO05D003841 2.1e-28 129.8 66 90.9
Cfa026533 Carpinus fangiana HOM05D002927 ORTHO05D003841 1.9e-26 123.2 101 57.4
Manes.04G121200 Manihot esculenta HOM05D002927 ORTHO05D003841 1.7e-22 110.2 52 96.2
Duzib094G0002 Durio zibethinus HOM05D002927 ORTHO05D003841 5.1e-19 98.6 108 53.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.0e-15 86.7 106 52.8
PSO724G0063 Papaver somniferum HOM05D002927 ORTHO05D003841 3.4e-15 85.9 159 34.6
DCAR_029021 Daucus carota HOM05D002927 ORTHO05D003841 1.6e-07 60.5 105 36.2
Lj5A63T62 Lonicera japonica HOM05D002927 ORTHO05D003841 1.3e-06 57.4 28 92.9


User provided reference genes

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