Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 6.4e-41 170.2 82 100.0
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 9.9e-34 146.4 80 86.2
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 3.8e-33 144.4 80 85.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 4.9e-33 144.1 80 83.8
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.4e-32 142.5 74 89.2
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 5.4e-32 140.6 80 82.5
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 5.4e-32 140.6 80 82.5
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 5.4e-32 140.6 80 82.5
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 5.4e-32 140.6 80 82.5
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 9.3e-32 139.8 79 81.0
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 9.3e-32 139.8 80 83.8
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.2e-31 139.4 80 80.0
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.2e-31 139.4 74 87.8
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 1.2e-31 139.4 74 86.5
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.6e-31 139.0 74 86.5
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.7e-31 138.3 80 80.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.5e-31 137.9 79 81.0
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.5e-31 137.9 79 81.0
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.5e-31 137.9 79 81.0
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 4.6e-31 137.5 80 81.2
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 4.6e-31 137.5 80 78.8
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 4.6e-31 137.5 80 80.0
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 6.0e-31 137.1 81 82.7
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 1.0e-30 136.3 74 86.5
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.7e-30 135.6 80 76.2
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.7e-30 135.6 74 85.1
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 1.7e-30 135.6 80 76.2
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 1.7e-30 135.6 74 82.4
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.7e-30 135.6 80 76.2
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.7e-30 135.6 74 83.8
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.3e-30 135.2 80 76.2
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 3.0e-30 134.8 74 83.8
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 3.0e-30 134.8 80 77.5
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 3.0e-30 134.8 74 85.1
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 3.0e-30 134.8 80 80.0
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 3.9e-30 134.4 80 78.8
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.5e-29 132.5 80 78.8
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 1.9e-29 132.1 80 72.5
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.9e-29 132.1 80 75.0
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.5e-29 131.7 74 79.7
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.3e-29 131.3 82 76.8
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 3.3e-29 131.3 80 72.5
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 3.3e-29 131.3 74 81.1
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.3e-29 131.3 81 77.8
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.3e-29 131.3 81 77.8
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 3.3e-29 131.3 74 79.7
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 4.3e-29 131.0 74 82.4
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 7.3e-29 130.2 80 71.2
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 7.3e-29 130.2 80 71.2
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 7.3e-29 130.2 81 76.5
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 7.3e-29 130.2 74 81.1
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 9.6e-29 129.8 74 81.1
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 9.6e-29 129.8 74 81.1
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 9.6e-29 129.8 74 78.4
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-28 129.4 81 76.5
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 2.1e-28 128.6 80 73.8
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 3.6e-28 127.9 74 77.0
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 3.6e-28 127.9 80 70.0
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 4.8e-28 127.5 74 78.4
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 8.1e-28 126.7 80 72.5
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 1.1e-27 126.3 74 79.7
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 1.4e-27 125.9 80 73.8
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 1.4e-27 125.9 81 75.3
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.8e-27 125.6 79 72.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.4e-27 125.2 79 69.6
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 2.4e-27 125.2 78 73.1
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 2.4e-27 125.2 82 70.7
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 2.4e-27 125.2 80 75.0
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 2.4e-27 125.2 80 73.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.4e-27 125.2 74 79.7
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 3.1e-27 124.8 80 72.5
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 3.1e-27 124.8 80 71.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 4.0e-27 124.4 81 72.8
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-26 122.9 74 74.3
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-26 122.9 74 74.3
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 2.0e-26 122.1 80 70.0
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 3.4e-26 121.3 70 77.1
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 4.5e-26 120.9 74 73.0
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 5.8e-26 120.6 78 70.5
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 9.9e-26 119.8 76 72.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.7e-25 119.0 76 69.7
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.7e-25 119.0 80 71.2
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 2.2e-25 118.6 74 71.6
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 2.2e-25 118.6 74 71.6
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.2e-25 118.6 74 71.6
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 2.2e-25 118.6 80 65.0
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 4.9e-25 117.5 74 70.3
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 4.9e-25 117.5 74 70.3
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 8.4e-25 116.7 74 70.3
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 8.4e-25 116.7 80 66.2
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.9e-24 115.5 73 69.9
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 3.5e-23 111.3 78 62.8
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 1.8e-22 109.0 69 68.1
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.7e-22 107.1 74 63.5
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.5e-21 105.9 74 70.3
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.5e-21 105.9 80 58.8
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 2.5e-21 105.1 76 56.6
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 6.2e-20 100.5 63 69.8
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 1.8e-19 99.0 75 58.7
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 7.6e-18 93.6 71 56.3
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 4.2e-16 87.8 77 51.9
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 7.1e-16 87.0 74 55.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 9.3e-16 86.7 60 61.7
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.2e-15 86.3 74 55.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.2e-12 73.9 63 55.6
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 7.1e-08 60.5 36 77.8


User provided reference genes

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