Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 7.5e-266 919.8 432 100.0
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.5e-229 799.3 521 77.9
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 7.2e-200 700.7 375 88.3
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 4.4e-197 691.4 370 88.1
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 2.2e-193 679.1 375 84.3
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 1.4e-190 669.8 372 84.4
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 1.8e-190 669.5 373 85.3
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 2.3e-190 669.1 372 84.4
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 3.0e-190 668.7 369 85.4
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 6.7e-190 667.5 371 83.8
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 3.3e-189 665.2 362 85.6
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 4.4e-189 664.8 372 85.2
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 4.4e-189 664.8 372 83.3
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 5.7e-189 664.5 372 83.6
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 9.7e-189 663.7 370 84.3
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.3e-188 663.3 369 85.4
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.3e-188 663.3 369 85.4
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 8.2e-188 660.6 371 83.0
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.1e-187 660.2 363 85.7
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 1.4e-187 659.8 369 84.0
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 1.4e-187 659.8 358 85.2
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 3.1e-187 658.7 363 85.1
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 3.1e-187 658.7 368 84.2
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 5.9e-186 654.4 362 84.3
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 7.7e-186 654.1 339 89.7
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 1.3e-185 653.3 371 84.1
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 1.3e-185 653.3 369 82.4
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 1.3e-185 653.3 364 83.2
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 2.2e-185 652.5 363 84.6
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 2.2e-185 652.5 358 84.4
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 3.8e-185 651.7 360 85.8
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 6.5e-185 651.0 369 83.5
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 1.1e-184 650.2 367 84.5
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 1.5e-184 649.8 369 83.7
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 1.9e-184 649.4 362 82.6
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 3.2e-184 648.7 362 82.9
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 4.2e-184 648.3 363 83.7
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 4.2e-184 648.3 367 83.4
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 5.5e-184 647.9 372 81.5
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 1.2e-183 646.7 362 82.3
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 1.6e-183 646.4 406 76.4
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 2.7e-183 645.6 363 84.3
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 2.7e-183 645.6 370 83.0
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 4.7e-183 644.8 370 81.6
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 3.0e-182 642.1 357 84.0
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 3.0e-182 642.1 369 82.1
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 4.0e-182 641.7 394 78.2
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 5.2e-182 641.3 364 81.3
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 1.2e-181 640.2 369 82.4
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.6e-181 639.0 363 82.6
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 2.6e-181 639.0 358 82.7
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 9.7e-181 637.1 372 80.1
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.7e-180 636.3 368 81.8
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 6.3e-180 634.4 374 80.7
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 1.4e-179 633.3 368 79.3
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 2.4e-179 632.5 378 79.9
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 4.5e-178 628.2 372 78.8
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 7.7e-178 627.5 369 79.4
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 1.3e-177 626.7 377 78.2
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.7e-177 626.3 364 81.9
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 1.5e-176 623.2 382 77.5
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 2.7e-175 619.0 390 74.9
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 3.6e-175 618.6 368 78.3
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 8.0e-175 617.5 373 78.6
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 1.0e-174 617.1 367 79.0
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 2.3e-174 615.9 369 78.6
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 2.3e-174 615.9 369 78.3
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 2.3e-174 615.9 373 78.6
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 3.0e-174 615.5 369 78.0
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 3.0e-174 615.5 371 77.9
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 4.0e-174 615.1 358 80.2
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 1.2e-173 613.6 364 81.3
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 1.2e-173 613.6 364 81.3
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 1.2e-173 613.6 370 76.5
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 2.2e-172 609.4 364 78.6
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 4.8e-172 608.2 369 77.5
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 3.1e-171 605.5 369 77.5
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 9.1e-171 604.0 369 77.2
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.5e-168 596.7 367 76.3
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.5e-168 596.7 368 76.4
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.5e-168 596.7 369 77.5
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.9e-168 596.3 369 76.2
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.9e-168 596.3 369 76.2
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 7.2e-168 594.3 359 74.9
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.8e-167 592.4 415 70.6
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.6e-167 592.0 368 76.4
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 8.0e-167 590.9 365 76.7
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 2.3e-166 589.3 385 74.3
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 1.5e-165 586.6 375 74.4
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 1.7e-164 583.2 375 72.8
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 1.4e-163 580.1 331 81.0
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 2.7e-162 575.9 369 71.3
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 3.1e-158 562.4 371 67.9
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 1.7e-156 556.6 390 72.1
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 2.0e-154 549.7 370 70.0
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 1.2e-146 523.9 358 70.4
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 4.7e-143 511.9 361 68.7
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 3.1e-142 509.2 395 64.1
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 2.6e-141 506.1 272 85.3
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 6.4e-140 501.5 355 66.2
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 4.4e-133 478.8 273 83.2
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 8.4e-132 474.6 374 62.8
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 3.5e-122 442.6 250 82.8
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 1.1e-120 437.6 220 91.4
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 8.1e-119 431.4 455 54.5
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 1.8e-118 430.3 356 60.1
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 9.0e-118 427.9 343 60.3
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.7e-116 423.7 369 55.0
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.2e-115 419.1 225 86.2
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 3.0e-113 412.9 370 54.3
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.9e-112 410.2 241 82.6
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 3.0e-105 386.3 203 87.2
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 6.1e-98 362.1 346 52.3
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.0e-97 359.8 218 77.1
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 5.7e-96 355.5 398 47.7
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 1.1e-91 341.3 427 45.9
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.4e-89 334.3 219 72.1
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 2.2e-84 317.0 332 48.5
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 1.8e-81 307.4 516 36.4
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 5.3e-70 269.2 174 74.1
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 5.3e-70 269.2 188 68.6
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.0e-65 255.0 157 75.2
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.6e-58 231.1 138 78.3
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 7.7e-53 212.2 183 60.1
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 8.6e-52 208.8 288 43.4
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 3.4e-48 196.8 183 56.8
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 9.8e-48 195.3 133 67.7
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.2e-46 188.7 115 76.5
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 1.9e-43 181.0 266 36.8
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 4.0e-41 173.3 308 32.1
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.2e-41 172.9 115 69.6
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 9.2e-38 162.2 352 29.3
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 2.1e-34 151.0 313 33.5
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 3.6e-34 150.2 74 86.5
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 2.3e-33 147.5 346 30.9
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 4.0e-33 146.7 89 75.3
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 6.8e-33 146.0 246 33.3
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 9.5e-27 125.6 117 59.0
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 5.2e-25 119.8 91 67.0
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.2e-24 118.6 113 58.4
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 9.9e-24 115.5 255 35.3
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.4e-22 110.9 112 47.3
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 1.4e-17 95.1 98 54.1
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 4.6e-13 80.1 108 46.3
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 1.9e-11 74.7 39 82.1
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 1.1e-09 68.9 146 32.9
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 2.0e-08 64.7 31 87.1


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