Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 2.0e-56 222.2 116 100.0
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 6.3e-42 174.1 140 71.4
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 2.6e-40 168.7 136 70.6
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 6.1e-37 157.5 138 68.1
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 6.1e-37 157.5 136 65.4
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.4e-36 156.4 131 70.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 3.3e-35 151.8 145 64.8
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 5.7e-35 151.0 134 62.7
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.4e-35 150.6 131 65.6
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.4e-35 150.6 131 65.6
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 9.7e-35 150.2 139 61.9
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 9.7e-35 150.2 138 60.1
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.7e-34 149.4 123 68.3
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 2.2e-34 149.1 129 62.8
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.1e-33 146.7 127 63.8
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.1e-33 146.7 138 59.4
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.8e-33 146.0 132 62.9
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 2.4e-33 145.6 134 63.4
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 3.1e-33 145.2 137 63.5
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 3.1e-33 145.2 138 58.7
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 4.1e-33 144.8 134 61.2
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 5.3e-33 144.4 138 58.7
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 9.1e-33 143.7 121 66.9
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 2.0e-32 142.5 139 59.0
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 3.5e-32 141.7 130 62.3
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 4.5e-32 141.4 127 62.2
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 5.9e-32 141.0 136 59.6
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.7e-31 139.4 137 59.1
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 3.8e-31 138.3 140 59.3
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.0e-31 137.9 132 60.6
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.1e-30 136.7 138 55.1
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.1e-30 136.7 127 59.8
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.1e-30 136.7 131 62.6
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 9.4e-30 133.7 128 60.2
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 9.4e-30 133.7 128 60.2
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 2.1e-29 132.5 129 60.5
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 2.1e-29 132.5 129 60.5
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.1e-29 132.5 128 59.4
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.7e-29 132.1 121 60.3
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 8.0e-29 130.6 132 55.3
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 8.0e-29 130.6 120 64.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.3e-28 129.0 120 58.3
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 1.1e-27 126.7 128 57.8
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.6e-27 125.6 139 54.7
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 5.7e-27 124.4 128 57.0
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 9.7e-27 123.6 128 58.6
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.3e-26 123.2 142 54.2
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.7e-26 122.9 128 57.0
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 2.2e-26 122.5 116 60.3
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.8e-26 122.1 133 56.4
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 2.8e-26 122.1 128 58.6
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 2.8e-26 122.1 166 48.8
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 4.8e-26 121.3 124 58.1
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 1.1e-25 120.2 143 53.1
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 4.1e-25 118.2 142 54.2
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 5.3e-25 117.9 75 80.0
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.2e-24 116.7 75 77.3
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.6e-24 116.3 133 53.4
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.0e-24 115.9 132 55.3
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 2.6e-24 115.5 145 53.8
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.6e-24 115.5 70 84.3
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 2.6e-24 115.5 127 54.3
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 2.6e-24 115.5 133 53.4
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 7.7e-24 114.0 75 78.7
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.3e-23 113.2 140 52.1
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 1.7e-23 112.8 75 76.0
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.9e-23 112.1 127 53.5
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 3.8e-23 111.7 118 56.8
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 3.8e-23 111.7 118 55.9
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 5.0e-23 111.3 144 50.7
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.0e-23 111.3 75 76.0
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 8.5e-23 110.5 127 54.3
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 8.5e-23 110.5 127 54.3
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.1e-22 110.2 132 52.3
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.5e-22 109.8 137 52.6
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 1.9e-22 109.4 118 56.8
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.9e-22 109.4 132 51.5
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 9.4e-22 107.1 127 52.8
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 9.4e-22 107.1 127 52.8
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 9.4e-22 107.1 127 52.8
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 9.4e-22 107.1 113 56.6
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 1.2e-21 106.7 138 49.3
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.2e-21 106.7 127 53.5
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 1.2e-21 106.7 113 55.8
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 2.1e-21 105.9 123 52.8
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.7e-21 105.5 113 54.9
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.7e-21 105.5 166 42.8
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 4.7e-21 104.8 77 72.7
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 8.0e-21 104.0 113 54.9
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.8e-20 102.8 76 71.1
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.8e-20 102.8 76 71.1
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 4.0e-20 101.7 162 45.7
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 8.8e-20 100.5 126 52.4
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 8.8e-20 100.5 126 53.2
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 2.0e-19 99.4 127 48.8
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 5.7e-19 97.8 126 50.8
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.3e-18 96.7 113 52.2
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 6.3e-18 94.4 88 62.5
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.1e-17 93.6 69 73.9
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 4.1e-17 91.7 79 64.6
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 9.1e-17 90.5 81 61.7
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.2e-15 85.9 121 47.9
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 3.8e-15 85.1 92 57.6
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 9.4e-14 80.5 144 41.0
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 2.1e-13 79.3 65 66.2
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 6.1e-13 77.8 109 45.0
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.8e-12 73.9 90 51.1
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.5e-11 73.2 127 40.9
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.5e-11 70.9 90 51.1
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 3.1e-09 65.5 120 37.5
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.5e-06 56.6 65 49.2
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 3.3e-06 55.5 67 50.7
ECA246G4512 Erigeron canadensis HOM05D007880 ORTHO05D003386 7.2e-06 54.3 58 53.4
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 7.2e-06 54.3 59 54.2


User provided reference genes

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