Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012306 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.3e-103 379.8 200 100.0
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.1e-78 297.0 190 86.3
CSS0041477 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.4e-78 296.6 190 86.3
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 4.6e-77 291.6 196 81.1
Dinv41398 Davidia involucrata HOM05D003779 ORTHO05D002678 1.0e-71 273.9 195 76.9
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 2.8e-66 255.8 189 73.5
Actinidia04285 Actinidia chinensis HOM05D003779 ORTHO05D002678 1.7e-63 246.5 194 72.7
Cfa020847 Carpinus fangiana HOM05D003779 ORTHO05D002678 1.1e-62 243.8 188 70.2
Haze_19235 Corylus avellana HOM05D003779 ORTHO05D002678 1.1e-62 243.8 188 70.2
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 1.2e-61 240.4 195 71.8
Actinidia38340 Actinidia chinensis HOM05D003779 ORTHO05D007251 1.8e-60 236.5 188 71.3
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 3.1e-57 225.7 191 67.0
Thecc.09G033700 Theobroma cacao HOM05D003779 ORTHO05D002678 5.3e-57 224.9 170 70.6
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 1.7e-55 219.9 188 67.6
QL02p092676 Quercus lobata HOM05D003779 ORTHO05D002678 3.8e-55 218.8 188 64.9
CiPaw.15G174200 Carya illinoinensis HOM05D003779 ORTHO05D002678 2.5e-54 216.1 188 65.4
Ciclev10007258m.g Citrus clementina HOM05D003779 ORTHO05D002678 7.2e-54 214.5 188 66.0
Manes.14G111700 Manihot esculenta HOM05D003779 ORTHO05D002678 9.4e-54 214.2 187 63.6
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 1.6e-53 213.4 187 64.2
Duzib168G2294 Durio zibethinus HOM05D003779 ORTHO05D002678 2.1e-53 213.0 170 70.6
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 2.1e-53 213.0 188 64.4
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 3.0e-52 209.1 195 65.1
Phvul.009G194000 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 2.6e-51 206.1 190 66.8
Gohir.D07G030200 Gossypium hirsutum HOM05D003779 ORTHO05D002678 4.4e-51 205.3 178 63.5
Gorai.001G031400 Gossypium raimondii HOM05D003779 ORTHO05D002678 4.4e-51 205.3 178 63.5
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 9.8e-51 204.1 188 64.9
Gohir.A07G026300 Gossypium hirsutum HOM05D003779 ORTHO05D002678 4.8e-50 201.8 178 62.4
Glyma.09G097600 Glycine max HOM05D003779 ORTHO05D002678 1.4e-49 200.3 190 67.4
TPR.G35880 Trifolium pratense HOM05D003779 ORTHO05D002678 4.1e-49 198.7 197 62.4
Rhsim01G0045400 Rhododendron simsii HOM05D003779 ORTHO05D002678 7.0e-49 198.0 192 65.1
Rhsim01G0036200 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.2e-48 197.2 192 65.1
Glyma.15G205600 Glycine max HOM05D003779 ORTHO05D002678 1.6e-48 196.8 190 66.8
Ca_14533_v3 Cicer arietinum L. HOM05D003779 ORTHO05D002678 2.7e-48 196.1 197 62.9
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 4.5e-48 195.3 193 61.1
Medtr2g450210 Medicago truncatula HOM05D003779 ORTHO05D002678 5.9e-48 194.9 197 63.5
Atru.chr7.134 Acer truncatum HOM05D003779 ORTHO05D002678 7.7e-48 194.5 190 63.2
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 7.7e-48 194.5 197 61.4
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 1.7e-47 193.4 193 61.1
Duzib187G1590 Durio zibethinus HOM05D003779 ORTHO05D002678 2.9e-47 192.6 180 61.7
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 5.0e-47 191.8 196 60.2
Potri.018G110100 Populus trichocarpa HOM05D003779 ORTHO05D002678 1.5e-46 190.3 197 58.4
TAR636G1028 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.9e-46 189.9 192 59.9
ClCG06G012240 Citrullus lanatus HOM05D003779 ORTHO05D002678 1.6e-45 186.8 190 61.6
Lalb_Chr13g0300951 Lupinus albus HOM05D003779 ORTHO05D002678 1.6e-45 186.8 190 59.5
ECA234G1613 Erigeron canadensis HOM05D003779 ORTHO05D002678 2.8e-45 186.0 171 61.4
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 3.6e-45 185.7 187 60.4
Sabra18G0093100 Salix brachista HOM05D003779 ORTHO05D002678 3.6e-45 185.7 195 58.5
Sed0010991 Sechium edule HOM05D003779 ORTHO05D002678 3.6e-45 185.7 190 58.4
Gohir.A13G184900 Gossypium hirsutum HOM05D003779 ORTHO05D002678 8.0e-45 184.5 170 62.9
Manes.06G037900 Manihot esculenta HOM05D003779 ORTHO05D002678 8.0e-45 184.5 179 61.5
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea HOM05D003779 ORTHO05D002678 1.4e-44 183.7 191 61.3
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 3.0e-44 182.6 195 57.9
MELO3C010242.2 Cucumis melo HOM05D003779 ORTHO05D002678 4.0e-44 182.2 189 60.3
Gorai.013G217400 Gossypium raimondii HOM05D003779 ORTHO05D002678 4.0e-44 182.2 173 60.7
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea HOM05D003779 ORTHO05D002678 5.2e-44 181.8 191 60.7
VMungo1309G0106 Vigna mungo HOM05D003779 ORTHO05D002678 4.4e-43 178.7 184 63.0
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 1.3e-42 177.2 152 68.4
Lj6g0022686 Lotus japonicus HOM05D003779 ORTHO05D002678 1.7e-42 176.8 190 61.6
DCAR_019379 Daucus carota HOM05D003779 ORTHO05D002678 2.2e-42 176.4 197 53.3
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 8.3e-42 174.5 195 54.9
Lj9C714G7 Lonicera japonica HOM05D003779 ORTHO05D002678 3.1e-41 172.6 198 56.6
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 3.1e-41 172.6 206 52.9
TAR625G1002 Trochodendron aralioides HOM05D003779 ORTHO05D002678 3.1e-41 172.6 187 58.3
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 4.1e-41 172.2 206 55.8
CsaV3_1G028740 Cucumis sativus L. HOM05D003779 ORTHO05D002678 7.0e-41 171.4 185 59.5
COL.COLO4_18776 Corchorus olitorius HOM05D003779 ORTHO05D002678 1.2e-40 170.6 158 62.7
MD02G1009900 Malus domestica HOM05D003779 ORTHO05D002678 7.8e-40 167.9 223 52.0
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 2.3e-39 166.4 193 54.9
Psat1g022120 Pisum sativum HOM05D003779 ORTHO05D002678 2.9e-39 166.0 236 48.7
FAN26G3236 Fragaria x ananassa HOM05D003779 ORTHO05D002678 7.3e-38 161.4 195 54.4
AUR62039744 Chenopodium quinoa HOM05D003779 ORTHO05D002678 1.6e-37 160.2 193 52.3
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 1.6e-37 160.2 193 53.4
EL10Ac8g18849 Beta vulgaris HOM05D003779 ORTHO05D002678 1.8e-36 156.8 192 54.7
Oeu026545.1 Olea europaea HOM05D003779 ORTHO05D002678 1.8e-36 156.8 149 62.4
FAN28G2365 Fragaria x ananassa HOM05D003779 ORTHO05D002678 3.0e-36 156.0 195 53.8
FvH4_1g01180 Fragaria vesca HOM05D003779 ORTHO05D002678 4.0e-36 155.6 195 54.4
FAN19G1766 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.0e-36 155.6 195 54.4
PGR102G2779 Punica granatum HOM05D003779 ORTHO05D002678 7.5e-35 151.4 158 58.2
Lalb_Chr08g0233951 Lupinus albus HOM05D003779 ORTHO05D002678 1.3e-34 150.6 188 55.3
Ah.14g078430 Amaranthus hybridus HOM05D003779 ORTHO05D002678 8.3e-34 147.9 193 51.8
Sp6g19720 Schrenkiella parvula HOM05D003779 ORTHO05D002678 1.4e-33 147.1 193 49.7
Lalb_Chr08g0234021 Lupinus albus HOM05D003779 ORTHO05D002678 2.4e-33 146.4 188 54.3
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 4.1e-33 145.6 179 56.4
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 5.4e-33 145.2 195 52.8
HanXRQChr10g0314671 Helianthus annuus HOM05D003779 ORTHO05D002678 2.0e-32 143.3 174 52.3
AT5G58040 Arabidopsis thaliana HOM05D003779 ORTHO05D002678 1.0e-31 141.0 189 49.2
AL8G34140 Arabidopsis lyrata HOM05D003779 ORTHO05D002678 1.7e-31 140.2 190 50.0
C09p49960 Brassica napus HOM05D003779 ORTHO05D002678 2.3e-31 139.8 188 47.9
BolC9t57849H Brassica oleracea HOM05D003779 ORTHO05D002678 2.3e-31 139.8 188 47.9
Carub.0008s1859 Capsella rubella HOM05D003779 ORTHO05D002678 3.9e-31 139.0 188 48.9
HanXRQChr12g0357201 Helianthus annuus HOM05D003779 ORTHO05D002678 5.0e-31 138.7 174 51.1
A10p16130 Brassica napus HOM05D003779 ORTHO05D002678 6.6e-31 138.3 187 48.1
BraA10t43616Z Brassica rapa HOM05D003779 ORTHO05D002678 6.6e-31 138.3 187 48.1
Lsat_1_v5_gn_5_91481 Lactuca sativa HOM05D003779 ORTHO05D002678 8.6e-31 137.9 177 52.0
BcaC04g19912 Brassica carinata HOM05D003779 ORTHO05D002678 1.5e-30 137.1 188 47.3
BcaB08g36155 Brassica carinata HOM05D003779 ORTHO05D002678 1.9e-30 136.7 188 49.5
Migut.J01330 Erythranthe guttata HOM05D003779 ORTHO05D002678 2.5e-30 136.3 210 47.1
Aa31LG3G13870 Aethionema arabicum HOM05D003779 ORTHO05D002678 4.3e-30 135.6 194 46.4
A03p12430 Brassica napus HOM05D003779 ORTHO05D002678 7.3e-30 134.8 194 47.4
DCAR_020882 Daucus carota HOM05D003779 ORTHO05D002678 9.5e-30 134.4 183 48.6
SalBow1G3877 Salvia bowleyana HOM05D003779 ORTHO05D002678 2.1e-29 133.3 171 49.1
Thhalv10012479m.g Eutrema salsugineum HOM05D003779 ORTHO05D002678 2.8e-29 132.9 194 46.4
CARHR271850 Cardamine hirsuta HOM05D003779 ORTHO05D002678 1.4e-28 130.6 190 47.4
C03p14630 Brassica napus HOM05D003779 ORTHO05D002678 1.8e-28 130.2 189 46.6
Ah.14g078210 Amaranthus hybridus HOM05D003779 ORTHO05D002678 2.3e-28 129.8 187 49.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.0e-28 129.0 172 51.2
SGA_v2.0_scaffold206G41814 Striga asiatica HOM05D003779 ORTHO05D002678 1.5e-27 127.1 204 46.6
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 5.8e-27 125.2 193 45.1
PSO170G5719 Papaver somniferum HOM05D003779 ORTHO05D002678 1.9e-25 120.2 172 48.8
VMungo1215G0704 Vigna mungo HOM05D003779 ORTHO05D002678 2.4e-25 119.8 186 46.8
MBI15_g10629_MAGBIO Magnolia biondii HOM05D003779 ORTHO05D002678 3.2e-25 119.4 154 53.9
CDE05G1362 Ceratophyllum demersum HOM05D003779 ORTHO05D002678 5.4e-25 118.6 173 46.8
SGA_v2.0_scaffold387G50508 Striga asiatica HOM05D003779 ORTHO05D002678 5.4e-25 118.6 197 45.2
PGSC0003DMG400003182 Solanum tuberosum HOM05D003779 ORTHO05D002678 1.2e-24 117.5 115 58.3
PSO017G3118 Papaver somniferum HOM05D003779 ORTHO05D002678 3.5e-24 115.9 172 49.4
Hma1.2p1_0222F.1_g093310 Hydrangea macrophylla HOM05D003779 ORTHO05D002678 1.3e-23 114.0 106 62.3
Hma1.2p1_2658F.1_g326355 Hydrangea macrophylla HOM05D003779 ORTHO05D002678 1.3e-23 114.0 106 62.3
Os03g0725100 Oryza sativa ssp. japonica HOM05D003779 ORTHO05D002678 3.0e-23 112.8 199 43.2
THA.LOC104813541 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 5.0e-23 112.1 177 44.1
BcaB01g04473 Brassica carinata HOM05D003779 ORTHO05D002678 3.3e-22 109.4 169 45.0
unitig_0.g2698 Utricularia gibba HOM05D003779 ORTHO05D002678 4.3e-22 109.0 167 45.5
THA.LOC104817824 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 1.2e-21 107.5 206 42.2
Zm00001eb055800 Zea mays HOM05D003779 ORTHO05D002678 4.7e-21 105.5 161 43.5
Zm00001eb215820 Zea mays HOM05D003779 ORTHO05D002678 1.1e-20 104.4 162 46.3
Aqoxy7G03464 Aquilegia oxysepala HOM05D003779 ORTHO05D002678 1.4e-20 104.0 166 45.2
BcaC09g49900 Brassica carinata HOM05D003779 ORTHO05D002678 4.4e-19 99.0 192 42.2
Phvul.003G157600 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 7.5e-19 98.2 191 40.3
SHI02627 Sapria himalayana HOM05D003779 ORTHO05D002678 3.7e-18 95.9 187 40.1
HPP92_020551 Vanilla planifolia HOM05D003779 ORTHO05D002678 6.4e-18 95.1 178 43.3
ATR0739G197 Amborella trichopoda HOM05D003779 ORTHO05D002678 5.4e-17 92.0 172 43.0
Dinv17810 Davidia involucrata HOM05D003779 ORTHO05D002678 7.6e-11 71.6 160 36.2
BraA03t10557Z Brassica rapa HOM05D003779 ORTHO05D002678 1.3e-10 70.9 134 40.3
BolC3t13903H Brassica oleracea HOM05D003779 ORTHO05D002678 9.2e-09 64.7 72 51.4
HPP92_020618 Vanilla planifolia HOM05D003779 ORTHO05D002678 1.2e-08 64.3 170 38.2


User provided reference genes

Program Settings