Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.8e-275 949.5 478 100.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 7.0e-273 943.3 478 99.2
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 6.1e-216 754.2 460 81.7
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.8e-213 745.3 471 79.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.0e-207 726.9 451 80.3
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 3.2e-193 678.7 461 72.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 5.7e-190 667.9 454 72.2
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 2.2e-189 666.0 461 70.9
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.6e-187 659.8 477 71.1
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.6e-187 659.8 430 74.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 2.6e-187 659.1 456 71.9
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 2.7e-184 649.0 446 72.4
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.3e-181 640.2 456 70.0
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 4.8e-181 638.3 460 70.4
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 1.1e-180 637.1 486 66.7
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 3.1e-180 635.6 461 70.3
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 9.1e-180 634.0 445 70.3
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 4.5e-179 631.7 461 69.4
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 7.7e-179 630.9 445 69.9
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 1.0e-178 630.6 432 72.7
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 8.5e-178 627.5 461 67.0
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.1e-177 627.1 439 70.8
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.9e-177 626.3 444 69.4
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.5e-177 625.9 439 70.4
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.8e-175 619.8 461 68.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.8e-175 619.8 457 67.4
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.8e-175 619.8 441 68.9
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 8.8e-175 617.5 444 69.4
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 2.2e-173 612.8 444 68.9
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.4e-172 610.1 460 66.5
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 7.0e-172 607.8 451 66.3
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.0e-171 606.3 459 66.0
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 4.5e-171 605.1 399 75.4
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 7.7e-171 604.4 469 68.7
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 2.3e-170 602.8 445 68.5
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.9e-170 602.4 450 67.1
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.9e-170 602.4 444 65.8
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 3.8e-170 602.1 451 66.7
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 8.6e-170 600.9 433 67.0
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.1e-169 600.5 441 68.0
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.3e-169 599.0 461 67.0
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 5.6e-169 598.2 474 65.8
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.6e-168 596.7 430 66.5
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.7e-168 595.1 441 65.1
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 8.0e-168 594.3 430 65.6
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.0e-167 594.0 460 62.8
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.0e-167 594.0 449 68.6
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 2.3e-167 592.8 448 66.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 3.0e-167 592.4 410 71.0
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 5.2e-167 591.7 448 70.8
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 8.9e-167 590.9 435 66.0
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 5.7e-166 588.2 431 65.2
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.7e-165 586.6 464 66.8
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.7e-165 586.6 461 65.3
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.1e-164 583.9 442 65.2
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.4e-164 583.6 457 65.0
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 2.4e-164 582.8 464 65.5
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 7.0e-164 581.3 467 65.1
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 1.2e-163 580.5 430 67.4
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.2e-163 580.5 430 64.0
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.7e-162 576.6 463 62.2
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.5e-161 573.5 418 69.1
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 4.3e-161 572.0 462 63.6
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.6e-161 571.6 435 66.2
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 3.4e-158 562.4 444 63.5
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 4.4e-158 562.0 442 64.9
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 2.0e-155 553.1 441 65.5
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 6.0e-155 551.6 441 65.5
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 1.3e-154 550.4 447 64.0
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 6.6e-154 548.1 450 64.0
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 8.6e-154 547.7 445 63.6
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 1.9e-153 546.6 453 63.4
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 4.7e-152 542.0 454 63.2
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.3e-151 539.7 454 63.0
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 5.2e-151 538.5 454 62.8
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.4e-148 530.4 486 59.5
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.4e-148 530.4 446 61.0
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.2e-142 510.8 360 69.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.5e-142 510.4 423 59.6
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 5.8e-142 508.4 509 55.4
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 7.1e-140 501.5 432 57.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 9.6e-137 491.1 720 41.5
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 2.1e-136 490.0 442 55.7
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.5e-134 483.8 433 57.7
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 4.4e-134 482.3 433 56.6
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 4.9e-133 478.8 416 62.7
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 4.6e-123 445.7 301 68.8
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 6.0e-123 445.3 332 67.8
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.6e-120 436.0 310 69.0
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.4e-119 433.3 327 65.4
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.9e-119 431.8 400 59.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.9e-113 413.7 439 47.8
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 4.3e-113 412.5 317 65.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 5.3e-111 405.6 315 65.4
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 9.3e-108 394.8 433 49.9
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.6e-104 384.0 314 61.5
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.4e-103 380.9 364 51.4
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.3e-101 374.4 369 47.2
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.4e-100 370.9 318 60.7
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.5e-97 360.9 243 72.8
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 5.3e-95 352.4 324 57.7
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.6e-94 350.1 400 45.8
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 1.1e-81 308.1 352 50.0
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 6.7e-74 282.3 216 65.3
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.5e-73 281.2 243 60.1
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.8e-72 276.2 436 39.7
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 8.2e-72 275.4 212 62.3
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.0e-66 258.5 218 61.0
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.7e-64 250.0 191 62.3
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 3.0e-58 230.3 213 58.2
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.2e-51 208.4 144 75.0
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.2e-50 203.0 135 73.3
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.4e-47 194.1 170 58.8
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 2.5e-44 184.1 227 45.4
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 4.1e-39 166.8 135 63.7
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 1.1e-36 158.7 132 60.6
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.4e-34 151.8 98 72.4
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 1.6e-30 138.3 128 55.5
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 3.8e-24 117.1 107 48.6
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.0e-21 109.0 386 25.1
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 1.9e-20 104.8 387 24.0
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 7.3e-20 102.8 401 23.7
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.8e-18 98.2 75 64.0
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 2.0e-17 94.7 148 41.2
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 4.2e-15 87.0 58 74.1
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 2.1e-11 74.7 389 22.6
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 8.4e-08 62.8 40 77.5


User provided reference genes

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