Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012059 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D033890 5.3e-114 414.5 221 100.0
CSS0049618 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D033890 7.6e-113 410.6 221 99.1
Dinv27618 Davidia involucrata HOM05D000339 ORTHO05D000212 8.0e-30 134.8 183 51.9
GSVIVG01008424001 Vitis vinifera HOM05D000339 ORTHO05D000212 1.5e-28 130.6 178 51.1
Haze_18839 Corylus avellana HOM05D000339 ORTHO05D000212 2.0e-28 130.2 171 52.0
QL10p028490 Quercus lobata HOM05D000339 ORTHO05D000212 2.6e-28 129.8 169 55.6
CiPaw.15G142700 Carya illinoinensis HOM05D000339 ORTHO05D000212 9.8e-28 127.9 193 52.3
CiPaw.16G093000 Carya illinoinensis HOM05D000339 ORTHO05D000212 1.7e-27 127.1 185 53.0
Oeu046633.1 Olea europaea HOM05D000339 ORTHO05D000212 2.2e-27 126.7 173 51.4
Cfa019667 Carpinus fangiana HOM05D000339 ORTHO05D000212 3.7e-27 125.9 171 50.3
MD14G1235800 Malus domestica HOM05D000339 ORTHO05D000212 3.9e-24 115.9 195 45.6
Cc04_g06330 Coffea canephora HOM05D000339 ORTHO05D000212 7.3e-23 111.7 196 42.9
Sabra15G0038100 Salix brachista HOM05D000339 ORTHO05D000212 9.5e-23 111.3 202 46.5
Sabra15G0057700 Salix brachista HOM05D000339 ORTHO05D000212 9.5e-23 111.3 201 46.8
CAN.G1129.56 Capsicum annuum HOM05D000339 ORTHO05D000212 2.1e-22 110.2 203 40.4
Manes.06G007300 Manihot esculenta HOM05D000339 ORTHO05D000212 3.6e-22 109.4 189 46.0
Sabra15G0070800 Salix brachista HOM05D000454 ORTHO05D000212 3.6e-22 109.4 190 47.4
MD06G1231300 Malus domestica HOM05D000339 ORTHO05D000212 4.7e-22 109.0 192 43.8
VMungo0251G0580 Vigna mungo HOM05D000339 ORTHO05D000212 6.2e-22 108.6 186 43.5
Phvul.002G329500 Phaseolus vulgaris HOM05D000339 ORTHO05D000212 1.4e-21 107.5 190 45.3
Glyma.05G245900 Glycine max HOM05D000339 ORTHO05D000212 1.8e-21 107.1 190 44.2
Lj2g0012105 Lotus japonicus HOM05D000339 ORTHO05D000212 2.3e-21 106.7 167 46.1
Duzib205G0598 Durio zibethinus HOM05D000339 ORTHO05D000212 5.2e-21 105.5 181 51.9
Lj4g0005482 Lotus japonicus HOM05D000339 ORTHO05D000212 8.9e-21 104.8 185 39.5
Potri.012G047700 Populus trichocarpa HOM05D000339 ORTHO05D000212 8.9e-21 104.8 193 37.3
Glyma.08G053702 Glycine max HOM05D000339 ORTHO05D000212 1.2e-20 104.4 187 42.8
Potri.015G039100 Populus trichocarpa HOM05D000339 ORTHO05D000212 1.5e-20 104.0 181 42.0
Thecc.03G054500 Theobroma cacao HOM05D000339 ORTHO05D000212 4.4e-20 102.4 185 47.0
Lalb_Chr22g0353391 Lupinus albus HOM05D000339 ORTHO05D000212 5.8e-20 102.1 165 40.6
TAR374G1529 Trochodendron aralioides HOM05D000339 ORTHO05D000212 7.5e-20 101.7 177 42.4
Oeu015085.1 Olea europaea HOM05D000339 ORTHO05D000212 3.7e-19 99.4 175 41.7
Prupe.5G232600 Prunus persica HOM05D000339 ORTHO05D000212 3.7e-19 99.4 207 41.5
SalBow1G4625 Salvia bowleyana HOM05D000339 ORTHO05D000212 3.7e-19 99.4 174 41.4
Phvul.004G151575 Phaseolus vulgaris HOM05D000339 ORTHO05D000212 4.9e-19 99.0 190 40.0
CSS0038779 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.4e-18 97.4 180 45.0
CSS0041104 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.4e-18 97.4 180 45.6
Glyma.07G101000 Glycine max HOM05D000339 ORTHO05D000212 2.4e-18 96.7 188 41.5
VMungo0464G1747 Vigna mungo HOM05D000339 ORTHO05D000212 4.1e-18 95.9 233 36.5
FAN13G1871 Fragaria x ananassa HOM05D000339 ORTHO05D000212 7.1e-18 95.1 194 40.7
Manes.14G170900 Manihot esculenta HOM05D000339 ORTHO05D000212 7.1e-18 95.1 206 48.1
Nn3g18264 Nelumbo nucifera HOM05D000339 ORTHO05D000212 7.1e-18 95.1 168 42.3
PGSC0003DMG400005670 Solanum tuberosum HOM05D000339 ORTHO05D000212 2.7e-17 93.2 167 38.3
FAN08G2756 Fragaria x ananassa HOM05D000339 ORTHO05D000212 3.5e-17 92.8 195 38.5
Nn4g24211 Nelumbo nucifera HOM05D000339 ORTHO05D000212 3.5e-17 92.8 198 38.9
Sopen03g037710 Solanum pennellii HOM05D000339 ORTHO05D000212 3.5e-17 92.8 171 36.8
Solyc03g118770.4 Solanum lycopersicum HOM05D000339 ORTHO05D000212 6.0e-17 92.0 201 35.3
COL.COLO4_37684 Corchorus olitorius HOM05D000339 ORTHO05D000212 1.3e-16 90.9 179 44.1
DCAR_023274 Daucus carota HOM05D000339 ORTHO05D000212 2.3e-16 90.1 185 42.7
TAR629G1086 Trochodendron aralioides HOM05D000339 ORTHO05D000212 3.9e-16 89.4 163 41.7
Glyma.09G177800 Glycine max HOM05D000339 ORTHO05D000212 5.1e-16 89.0 189 45.0
Psat7g002400 Pisum sativum HOM05D000339 ORTHO05D000212 8.6e-16 88.2 179 36.3
RcHm_v2.0_Chr7g0178511 Rosa chinensis HOM05D000339 ORTHO05D000212 1.5e-15 87.4 191 38.7
Lalb_Chr14g0370741 Lupinus albus HOM05D000339 ORTHO05D000212 1.9e-15 87.0 163 47.2
Eucgr.B00945 Eucalyptus grandis HOM05D000339 ORTHO05D000212 2.5e-15 86.7 197 36.5
FvH4_5g17270 Fragaria vesca HOM05D000339 ORTHO05D000212 3.3e-15 86.3 195 37.4
FAN18G3640 Fragaria x ananassa HOM05D000339 ORTHO05D000212 3.3e-15 86.3 195 37.4
TWI60G1718 Tripterygium wilfordii HOM05D000339 ORTHO05D000212 3.3e-15 86.3 198 36.9
Duzib068G1069 Durio zibethinus HOM05D000339 ORTHO05D000212 7.3e-15 85.1 170 46.5
TWI81G0853 Tripterygium wilfordii HOM05D000339 ORTHO05D000212 7.3e-15 85.1 190 38.4
FAN04G2675 Fragaria x ananassa HOM05D000339 ORTHO05D000212 1.2e-14 84.3 186 37.6
Ca_17194_v3 Cicer arietinum L. HOM05D000339 ORTHO05D000212 1.6e-14 84.0 198 40.4
TAR622G0891 Trochodendron aralioides HOM05D000339 ORTHO05D000212 1.6e-14 84.0 179 46.4
Duzib084G0984 Durio zibethinus HOM05D000339 ORTHO05D000212 2.8e-14 83.2 174 50.0
Lalb_Chr05g0221701 Lupinus albus HOM05D000339 ORTHO05D000212 6.2e-14 82.0 183 36.6
Actinidia06842 Actinidia chinensis HOM05D000339 ORTHO05D000212 1.4e-13 80.9 189 45.5
Sabra12G0033500 Salix brachista HOM05D000339 ORTHO05D000212 1.4e-13 80.9 182 34.1
MSTRG.9298 Avicennia marina HOM05D000339 ORTHO05D000212 1.8e-13 80.5 183 38.3
Medtr8g107210 Medicago truncatula HOM05D000339 ORTHO05D000212 3.1e-13 79.7 191 34.0
Ciclev10008783m.g Citrus clementina HOM05D000339 ORTHO05D000212 4.0e-13 79.3 190 37.9
Atru.chr9.1742 Acer truncatum HOM05D000339 ORTHO05D000212 1.5e-12 77.4 170 41.8
Nitab4.5_0016590g0010 Nicotiana tabacum HOM05D000339 ORTHO05D000212 1.5e-12 77.4 152 37.5
Lj5P157T43 Lonicera japonica HOM05D000339 ORTHO05D033890 7.6e-12 75.1 132 40.9
Gohir.A12G269100 Gossypium hirsutum HOM05D000339 ORTHO05D000212 9.9e-12 74.7 188 38.3
Oeu046167.1 Olea europaea HOM05D000339 ORTHO05D000212 2.9e-11 73.2 176 38.1
MSTRG.4575 Avicennia marina HOM05D000339 ORTHO05D000212 3.8e-11 72.8 188 35.1
Gohir.D12G269500 Gossypium hirsutum HOM05D000339 ORTHO05D000212 3.8e-11 72.8 188 37.8
TPR.G1426 Trifolium pratense HOM05D000339 ORTHO05D000212 3.8e-11 72.8 213 38.5
Actinidia28130 Actinidia chinensis HOM05D000339 ORTHO05D000212 8.4e-11 71.6 161 42.9
Peaxi162Scf00683g00044 Petunia axillaris HOM05D000339 ORTHO05D000212 1.4e-10 70.9 133 47.4
Gorai.008G289800 Gossypium raimondii HOM05D000339 ORTHO05D000212 1.9e-10 70.5 188 37.2
Thecc.02G283500 Theobroma cacao HOM05D000339 ORTHO05D000212 1.6e-09 67.4 188 33.0
Duzib251G0913 Durio zibethinus HOM05D000339 ORTHO05D000212 3.5e-09 66.2 198 33.3
Aqoxy3G00084 Aquilegia oxysepala HOM05D000339 ORTHO05D000212 7.8e-09 65.1 141 42.6
Lalb_Chr16g0387031 Lupinus albus HOM05D000339 ORTHO05D000212 2.3e-08 63.5 144 36.8
Hma1.2p1_0096F.1_g047710 Hydrangea macrophylla HOM05D000339 ORTHO05D000212 6.6e-08 62.0 156 33.3
Potri.010G111400 Populus trichocarpa HOM05D000339 ORTHO05D000212 4.3e-07 59.3 178 30.9
Cpa.g.sc3.402 Carica papaya HOM05D000339 ORTHO05D000212 5.6e-07 58.9 202 41.1
Migut.D01555 Erythranthe guttata HOM05D000339 ORTHO05D000212 1.2e-06 57.8 171 39.8
Duzib268G0135 Durio zibethinus HOM05D000339 ORTHO05D000212 1.6e-06 57.4 185 30.8
Glyma.07G219400 Glycine max HOM05D000339 ORTHO05D000212 4.7e-06 55.8 174 32.8
MBI12_g38294_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 4.7e-06 55.8 162 35.8
MBI12_g41015_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 4.7e-06 55.8 162 35.8
Nitab4.5_0001456g0200 Nicotiana tabacum HOM05D000339 ORTHO05D000212 4.7e-06 55.8 76 48.7
THA.LOC104821830 Tarenaya hassleriana HOM05D000339 ORTHO05D000212 8.1e-06 55.1 205 27.3


User provided reference genes

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