Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.1e-82 310.8 568 100.0
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.7e-63 246.9 120 98.3
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.5e-56 224.9 568 87.0
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.9e-51 208.0 119 81.5
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.5e-43 181.0 120 70.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 7.3e-43 179.5 120 70.0
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 2.8e-42 177.6 120 65.0
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 6.2e-42 176.4 120 68.3
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.4e-41 175.3 120 69.2
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.1e-41 174.1 120 65.0
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 6.8e-41 172.9 120 65.8
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.5e-40 171.8 121 69.4
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 2.6e-40 171.0 120 65.8
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 5.8e-40 169.9 120 65.8
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 5.8e-40 169.9 110 68.2
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 9.9e-40 169.1 120 63.3
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 1.3e-39 168.7 120 65.0
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 6.4e-39 166.4 119 63.9
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 8.4e-39 166.0 120 62.5
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.1e-38 165.6 113 68.1
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.4e-38 165.2 119 64.7
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.4e-38 165.2 120 65.8
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.9e-38 164.9 120 60.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.9e-38 164.9 120 60.8
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.2e-38 163.7 120 62.5
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.2e-38 163.7 121 65.3
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 9.3e-38 162.5 119 64.7
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 9.3e-38 162.5 120 63.3
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.2e-37 162.2 119 63.0
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.2e-37 162.2 117 65.8
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 3.5e-37 160.6 121 62.0
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 4.6e-37 160.2 119 60.5
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 4.6e-37 160.2 119 60.5
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 7.8e-37 159.5 120 63.3
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 1.3e-36 158.7 122 62.3
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 2.3e-36 157.9 113 63.7
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 2.3e-36 157.9 122 61.5
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.0e-36 157.5 117 61.5
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 3.0e-36 157.5 117 61.5
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 3.9e-36 157.1 119 61.3
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 1.5e-35 155.2 122 61.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 2.5e-35 154.5 121 64.5
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.5e-35 154.5 119 63.0
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.5e-35 154.5 119 63.0
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 3.3e-35 154.1 119 63.0
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 5.6e-35 153.3 119 63.0
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.6e-35 153.3 119 63.0
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 7.3e-35 152.9 122 59.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 7.3e-35 152.9 120 60.0
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 9.6e-35 152.5 120 61.7
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.3e-34 152.1 119 58.8
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.6e-34 151.8 122 59.8
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 4.8e-34 150.2 124 60.5
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 6.2e-34 149.8 113 61.1
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.1e-33 149.1 122 61.5
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.4e-33 148.7 121 61.2
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 2.4e-33 147.9 128 57.8
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 9.0e-33 146.0 128 57.8
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.2e-32 145.6 113 59.3
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.0e-32 144.8 119 58.0
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.0e-32 144.8 127 56.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.0e-32 144.8 113 58.4
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 2.6e-32 144.4 116 62.9
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 2.6e-32 144.4 128 60.9
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 3.4e-32 144.1 128 57.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 3.4e-32 144.1 128 57.0
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.4e-32 143.7 113 58.4
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 2.9e-31 141.0 118 55.1
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.4e-30 138.7 115 56.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.2e-30 137.5 115 56.5
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 7.1e-30 136.3 70 85.7
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 6.0e-29 133.3 125 53.6
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 1.3e-28 132.1 134 53.0
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.7e-28 131.7 122 53.3
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.0e-28 131.0 85 69.4
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 4.3e-27 127.1 121 52.1
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 7.3e-27 126.3 125 54.4
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 1.6e-26 125.2 123 49.6
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 2.8e-26 124.4 123 49.6
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 2.4e-25 121.3 126 47.6
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 2.0e-24 118.2 119 55.5
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 7.6e-24 116.3 71 69.0
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 7.6e-24 116.3 132 49.2
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 9.9e-24 115.9 133 48.9
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 4.9e-23 113.6 135 47.4
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 1.1e-22 112.5 132 48.5
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.4e-22 112.1 130 46.9
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 3.2e-22 110.9 117 47.0
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 7.1e-22 109.8 128 48.4
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.2e-21 109.0 124 46.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 3.5e-21 107.5 133 46.6
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.9e-19 101.7 123 45.5
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 1.9e-19 101.7 123 45.5
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 2.8e-18 97.8 130 45.4
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 4.8e-18 97.1 101 48.5
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 6.2e-18 96.7 101 48.5
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 8.1e-18 96.3 126 43.7
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 2.4e-17 94.7 74 56.8
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.4e-16 90.9 67 64.2
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 3.4e-16 90.9 120 39.2
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 5.8e-16 90.1 120 39.2
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 2.9e-15 87.8 121 41.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.5e-14 84.7 68 64.7
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 5.5e-14 83.6 70 61.4
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 7.9e-13 79.7 52 73.1
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 6.7e-12 76.6 43 74.4
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 4.5e-08 63.9 67 53.7
ECA240G0851 Erigeron canadensis HOM05D006918 ORTHO05D008525 1.9e-06 58.5 33 81.8
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 1.9e-06 58.5 185 74.6


User provided reference genes

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