Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 6.9e-159 563.9 283 100.0
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 3.6e-123 445.3 289 78.5
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 1.3e-117 426.8 269 80.7
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 2.8e-112 409.1 273 76.2
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 5.9e-110 401.4 279 72.4
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 7.7e-110 401.0 279 72.4
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 1.6e-107 393.3 277 73.3
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 5.2e-106 388.3 297 67.3
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 2.2e-104 382.9 291 67.7
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 2.8e-104 382.5 275 71.6
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 1.4e-103 380.2 290 68.6
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 3.1e-103 379.0 278 68.7
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 3.1e-103 379.0 291 68.0
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 5.3e-103 378.3 289 66.1
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 1.6e-102 376.7 291 68.0
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 1.6e-102 376.7 269 73.6
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 2.0e-102 376.3 270 68.9
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 2.0e-102 376.3 298 67.1
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 2.7e-102 375.9 288 66.7
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 5.9e-102 374.8 291 67.0
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 7.7e-102 374.4 291 65.3
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 1.0e-101 374.0 284 68.0
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 1.3e-101 373.6 288 66.3
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 2.2e-101 372.9 294 67.7
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 3.8e-101 372.1 292 67.5
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 5.0e-101 371.7 269 70.3
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 8.5e-101 370.9 294 67.3
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 2.5e-100 369.4 294 66.7
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 1.2e-99 367.1 288 65.3
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 1.6e-99 366.7 250 75.2
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 2.7e-99 365.9 286 64.3
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 8.0e-99 364.4 292 64.4
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 1.0e-98 364.0 294 65.3
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 1.0e-98 364.0 273 67.0
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 1.8e-98 363.2 257 69.6
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 6.8e-98 361.3 297 64.3
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 8.8e-98 360.9 278 68.7
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 1.2e-97 360.5 285 65.3
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 3.4e-97 359.0 283 67.1
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 4.4e-97 358.6 292 66.4
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 4.4e-97 358.6 250 72.4
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 7.5e-97 357.8 291 66.0
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 7.5e-97 357.8 285 64.9
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 7.5e-97 357.8 293 64.2
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 1.3e-96 357.1 265 66.4
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 3.7e-96 355.5 286 65.4
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 4.8e-96 355.1 267 65.5
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 8.3e-96 354.4 249 69.1
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 2.4e-95 352.8 290 64.1
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 3.1e-95 352.4 276 65.2
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 9.1e-95 350.9 286 65.7
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 1.6e-94 350.1 267 64.8
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 2.0e-94 349.7 277 65.0
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 2.0e-94 349.7 286 64.3
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 7.7e-94 347.8 267 64.8
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 2.3e-93 346.3 288 63.9
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 2.9e-93 345.9 274 65.0
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 3.8e-93 345.5 275 63.3
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 5.0e-93 345.1 272 67.3
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 8.6e-93 344.4 269 65.1
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 8.6e-93 344.4 249 70.7
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 2.5e-92 342.8 276 64.9
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 7.2e-92 341.3 291 61.9
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 9.5e-92 340.9 269 65.1
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 1.6e-91 340.1 283 63.3
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 2.1e-91 339.7 269 64.3
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 6.1e-91 338.2 269 63.6
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 6.1e-91 338.2 281 61.9
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 6.1e-91 338.2 278 64.7
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 8.0e-91 337.8 252 66.3
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 2.3e-90 336.3 253 67.6
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 4.0e-90 335.5 267 62.9
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 8.9e-90 334.3 252 65.5
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 2.6e-89 332.8 267 62.2
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 4.4e-89 332.0 252 69.0
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 5.7e-89 331.6 278 64.4
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 2.8e-88 329.3 252 68.7
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 1.1e-87 327.4 274 63.5
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 2.4e-87 326.2 276 61.2
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 1.2e-86 323.9 270 61.1
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 1.7e-85 320.1 254 64.2
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 3.8e-85 318.9 291 59.8
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 6.6e-85 318.2 254 65.7
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 6.6e-85 318.2 262 60.7
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 2.5e-84 316.2 274 62.0
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 2.1e-83 313.2 252 63.1
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 4.7e-83 312.0 225 72.4
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 6.1e-83 311.6 291 58.4
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 6.4e-80 301.6 220 68.6
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 1.1e-79 300.8 253 59.7
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 3.0e-77 292.7 267 57.3
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 4.3e-76 288.9 272 59.2
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 3.6e-75 285.8 296 53.0
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 1.2e-73 280.8 230 67.4
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 3.7e-72 275.8 239 58.2
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 6.8e-58 228.4 180 63.9
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 2.7e-54 216.5 250 50.0
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 1.7e-53 213.8 187 62.6
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 6.6e-53 211.8 237 46.4
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 1.6e-51 207.2 190 60.0
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 1.7e-48 197.2 170 61.2
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 2.9e-48 196.4 243 44.9
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 6.4e-48 195.3 235 42.6
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 1.5e-44 184.1 267 41.9
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 3.1e-42 176.4 185 56.2
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 4.2e-39 166.0 231 44.2
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 6.0e-38 162.2 256 39.8
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 1.6e-35 154.1 240 39.2
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 8.1e-35 151.8 107 70.1
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 1.2e-33 147.9 104 65.4
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 1.8e-21 107.5 163 44.2
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 6.7e-21 105.5 120 53.3
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 4.5e-17 92.8 104 48.1
AUR62032114 Chenopodium quinoa HOM05D002933 ORTHO05D007742 2.6e-09 67.0 244 24.2
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 5.9e-09 65.9 244 24.2
EL10Ac5g11164 Beta vulgaris HOM05D002933 ORTHO05D007742 3.8e-08 63.2 247 23.5
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.9e-07 60.8 238 21.8
CAN.G1228.6 Capsicum annuum HOM05D002933 ORTHO05D007742 3.2e-07 60.1 115 31.3
Hund02566 Selenicereus undatus HOM05D002933 ORTHO05D007742 1.2e-06 58.2 114 31.6


User provided reference genes

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