Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011146 Camellia sinensis var. sinensis HOM05D000512 ORTHO05D112633 3.4e-61 238.0 112 100.0
Eucgr.G01968 Eucalyptus grandis HOM05D000512 ORTHO05D000861 2.2e-07 59.3 85 41.2
Atru.chr12.1412 Acer truncatum HOM05D000512 ORTHO05D000861 2.8e-07 58.9 53 52.8
Ciclev10004300m.g Citrus clementina HOM05D000512 ORTHO05D000861 3.7e-07 58.5 53 50.9
CANSAT01G2203 Cannabis sativa HOM05D000512 ORTHO05D000861 4.8e-07 58.2 53 50.9
Medtr7g020950 Medicago truncatula HOM05D000512 ORTHO05D000861 4.8e-07 58.2 54 50.0
GSVIVG01001086001 Vitis vinifera HOM05D000512 ORTHO05D000861 4.8e-07 58.2 53 50.9
Actinidia22117 Actinidia chinensis HOM05D000512 ORTHO05D000861 6.3e-07 57.8 53 50.9
MSTRG.8051 Avicennia marina HOM05D000512 ORTHO05D000861 6.3e-07 57.8 53 50.9
BolC3t15214H Brassica oleracea HOM05D000512 ORTHO05D000861 6.3e-07 57.8 87 34.5
ECA234G0095 Erigeron canadensis HOM05D000512 ORTHO05D000861 6.3e-07 57.8 53 50.9
TPR.G13620 Trifolium pratense HOM05D000512 ORTHO05D000861 6.3e-07 57.8 52 50.0
C03p28460 Brassica napus HOM05D000512 ORTHO05D000861 8.3e-07 57.4 87 34.5
PSO017G5805 Papaver somniferum HOM05D000512 ORTHO05D000861 8.3e-07 57.4 53 49.1
PSO478G0667 Papaver somniferum HOM05D000512 ORTHO05D000861 8.3e-07 57.4 53 49.1
Prupe.1G215400 Prunus persica HOM05D000512 ORTHO05D000861 8.3e-07 57.4 53 49.1
PGR119G1460 Punica granatum HOM05D000512 ORTHO05D000861 8.3e-07 57.4 85 40.0
HPP92_028068 Vanilla planifolia HOM05D000512 ORTHO05D000861 8.3e-07 57.4 53 52.8
FvH4_4g22690 Fragaria vesca HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
FAN07G2557 Fragaria x ananassa HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
FAN12G1767 Fragaria x ananassa HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
FAN17G0230 Fragaria x ananassa HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
Oeu027108.1 Olea europaea HOM05D000512 ORTHO05D000861 1.1e-06 57.0 55 49.1
RcHm_v2.0_Chr4g0428921 Rosa chinensis HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
TPR.G2956 Trifolium pratense HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 50.9
TWI36G0524 Tripterygium wilfordii HOM05D000512 ORTHO05D000861 1.1e-06 57.0 53 49.1
MD13G1130300 Malus domestica HOM05D000512 ORTHO05D000861 1.4e-06 56.6 53 49.1
QL03p049389 Quercus lobata HOM05D000512 ORTHO05D000861 1.4e-06 56.6 53 49.1
SMO117G0122 Selaginella moellendorffii HOM05D000512 ORTHO05D000861 1.4e-06 56.6 85 37.6
PGSC0003DMG400002248 Solanum tuberosum HOM05D000512 ORTHO05D000861 1.4e-06 56.6 52 50.0
TWI18G0134 Tripterygium wilfordii HOM05D000512 ORTHO05D000861 1.4e-06 56.6 53 49.1
Aqoxy1G01941 Aquilegia oxysepala HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 47.2
Aqoxy4G01652 Aquilegia oxysepala HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 47.2
Aqoxy5G03139 Aquilegia oxysepala HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 47.2
BcaB07g29808 Brassica carinata HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
BcaC03g18109 Brassica carinata HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
A02p41840 Brassica napus HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
C02p61770 Brassica napus HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
BolC2t12230H Brassica oleracea HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
CAN.G227.7 Capsicum annuum HOM05D000512 ORTHO05D000861 1.8e-06 56.2 85 38.8
HanXRQChr12g0386241 Helianthus annuus HOM05D000512 ORTHO05D000861 1.8e-06 56.2 58 48.3
Lalb_Chr17g0336481 Lupinus albus HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
Oeu044513.1 Olea europaea HOM05D000512 ORTHO05D000861 1.8e-06 56.2 55 49.1
Potri.003G162700 Populus trichocarpa HOM05D000512 ORTHO05D000861 1.8e-06 56.2 53 50.9
Zm00001eb242050 Zea mays HOM05D000512 ORTHO05D000861 1.8e-06 56.2 52 53.8
Aa31LG1G24660 Aethionema arabicum HOM05D000512 ORTHO05D000861 2.4e-06 55.8 73 39.7
A03p23860 Brassica napus HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 45.3
C03p28480 Brassica napus HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 45.3
CSS0022349 Camellia sinensis var. sinensis HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 49.1
Carub.0004s2536 Capsella rubella HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 45.3
Haze_12499 Corylus avellana HOM05D000512 ORTHO05D000861 2.4e-06 55.8 52 53.8
Os02g0517531 Oryza sativa ssp. japonica HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 50.9
Peaxi162Scf00128g01746 Petunia axillaris HOM05D000512 ORTHO05D000861 2.4e-06 55.8 55 47.3
Sp4g25020 Schrenkiella parvula HOM05D000512 ORTHO05D000861 2.4e-06 55.8 89 31.5
Solyc05g023740.3 Solanum lycopersicum HOM05D000512 ORTHO05D000861 2.4e-06 55.8 52 50.0
Sopen05g018350 Solanum pennellii HOM05D000512 ORTHO05D000861 2.4e-06 55.8 52 50.0
unitig_22.g6375 Utricularia gibba HOM05D000512 ORTHO05D000861 2.4e-06 55.8 85 38.8
VMungo1383G0360 Vigna mungo HOM05D000512 ORTHO05D000861 2.4e-06 55.8 53 50.9
MELO3C022357.2 Cucumis melo HOM05D000512 ORTHO05D000861 3.1e-06 55.5 53 49.1
CsaV3_6G007750 Cucumis sativus L. HOM05D000512 ORTHO05D000861 3.1e-06 55.5 53 49.1
Eucgr.B03556 Eucalyptus grandis HOM05D000512 ORTHO05D000861 3.1e-06 55.5 86 40.7
Hma1.2p1_0787F.1_g217910 Hydrangea macrophylla HOM05D000512 ORTHO05D000861 3.1e-06 55.5 53 47.2
Nn3g16278 Nelumbo nucifera HOM05D000512 ORTHO05D000861 3.1e-06 55.5 85 37.6
Pp3c15_21940 Physcomitrium patens HOM05D000512 ORTHO05D000861 3.1e-06 55.5 85 37.6
Potri.001G067300 Populus trichocarpa HOM05D000512 ORTHO05D000861 3.1e-06 55.5 53 49.1
AL6G17530 Arabidopsis lyrata HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
A10p29070 Brassica napus HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
C09p69440 Brassica napus HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
BolC9t59689H Brassica oleracea HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
BraA10t44955Z Brassica rapa HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
Carub.0006s0625 Capsella rubella HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
CARHR205860 Cardamine hirsuta HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
Cfa009446 Carpinus fangiana HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
Dinv23023 Davidia involucrata HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 49.1
Migut.K01058 Erythranthe guttata HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 49.1
Thhalv10012619m.g Eutrema salsugineum HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 50.9
Thhalv10016237m.g Eutrema salsugineum HOM05D000512 ORTHO05D000861 4.1e-06 55.1 89 31.5
Rhsim12G0017500 Rhododendron simsii HOM05D000512 ORTHO05D000861 4.1e-06 55.1 45 55.6
SalBow8G1772 Salvia bowleyana HOM05D000512 ORTHO05D000861 4.1e-06 55.1 53 49.1
Sc14g0009230 Simmondsia chinensis HOM05D000512 ORTHO05D000861 4.1e-06 55.1 85 37.6
Cfa021929 Carpinus fangiana HOM05D000512 ORTHO05D000861 5.4e-06 54.7 53 47.2
CiPaw.06G109200 Carya illinoinensis HOM05D000512 ORTHO05D000861 5.4e-06 54.7 53 49.1
Haze_13499 Corylus avellana HOM05D000512 ORTHO05D000861 5.4e-06 54.7 53 47.2
DCAR_003952 Daucus carota HOM05D000512 ORTHO05D000861 5.4e-06 54.7 53 49.1
TAR374G0663 Trochodendron aralioides HOM05D000512 ORTHO05D000861 5.4e-06 54.7 53 45.3
unitig_749.g13331 Utricularia gibba HOM05D000512 ORTHO05D000861 5.4e-06 54.7 85 37.6
AL4G41530 Arabidopsis lyrata HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 45.3
AT2G42890 Arabidopsis thaliana HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 45.3
CARHR137960 Cardamine hirsuta HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 45.3
CDE02G1106 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 45.3
Lj1g0013470 Lotus japonicus HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 50.9
THA.LOC104803247 Tarenaya hassleriana HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 43.4
Thecc.02G192800 Theobroma cacao HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 47.2
TAR622G0985 Trochodendron aralioides HOM05D000512 ORTHO05D000861 7.0e-06 54.3 100 33.0
Zm00001eb267600 Zea mays HOM05D000512 ORTHO05D000861 7.0e-06 54.3 53 45.3
BcaC01g02450 Brassica carinata HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
BcaC06g32451 Brassica carinata HOM05D000512 ORTHO05D000861 9.1e-06 53.9 51 52.9
A06p28610 Brassica napus HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
C03p65160 Brassica napus HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
CSS0029049 Camellia sinensis var. sinensis HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 47.2
CSS0040770 Camellia sinensis var. sinensis HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 47.2
CARHR275750 Cardamine hirsuta HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
CiPaw.05G101500 Carya illinoinensis HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 45.3
Thhalv10003623m.g Eutrema salsugineum HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
FvH4_3g06390 Fragaria vesca HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
FAN11G0176 Fragaria x ananassa HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
FAN21G2083 Fragaria x ananassa HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
HanXRQChr16g0526051 Helianthus annuus HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 47.2
PGR119G1367 Punica granatum HOM05D000512 ORTHO05D000861 9.1e-06 53.9 80 40.0
Sp2g25140 Schrenkiella parvula HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1
Sed0006779 Sechium edule HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 45.3
TAR371G0460 Trochodendron aralioides HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 45.3
TAR626G0671 Trochodendron aralioides HOM05D000512 ORTHO05D000861 9.1e-06 53.9 53 49.1


User provided reference genes

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