Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 3.0e-151 538.5 277 100.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.3e-122 443.4 277 81.9
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 9.5e-121 437.2 277 80.1
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 4.1e-108 395.2 277 73.3
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.6e-104 383.3 266 73.3
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 6.2e-104 381.3 277 67.5
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 4.0e-103 378.6 274 71.2
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 7.6e-102 374.4 266 71.8
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.3e-101 373.6 266 71.4
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 1.7e-101 373.2 279 70.6
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.3e-98 363.6 257 72.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.0e-98 362.5 276 67.8
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 7.3e-97 357.8 276 67.8
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.8e-96 355.9 276 66.7
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 8.1e-96 354.4 275 67.3
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 8.9e-95 350.9 256 70.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 1.5e-94 350.1 274 64.6
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 6.4e-93 344.7 264 65.9
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.4e-92 342.8 269 66.5
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 5.4e-92 341.7 267 66.7
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 9.3e-92 340.9 268 61.9
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.6e-91 338.6 264 68.2
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.3e-90 337.0 260 66.9
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 3.0e-90 335.9 266 64.7
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 3.9e-90 335.5 270 61.9
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 6.6e-90 334.7 260 69.2
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.1e-89 334.0 270 62.6
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 3.3e-89 332.4 233 72.5
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 5.6e-89 331.6 270 61.1
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.6e-89 331.6 227 74.4
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 4.8e-88 328.6 269 63.9
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 3.1e-87 325.9 279 62.4
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 4.0e-87 325.5 277 61.7
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 5.3e-87 325.1 295 58.0
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.2e-86 323.9 269 60.2
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 5.4e-84 315.1 274 60.2
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 9.3e-84 314.3 264 61.0
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 7.9e-83 311.2 277 58.8
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.9e-81 306.6 279 59.5
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 9.6e-81 304.3 276 55.4
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.6e-80 303.5 277 58.8
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 6.2e-80 301.6 256 63.3
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 3.1e-79 299.3 274 59.1
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 4.0e-79 298.9 279 58.8
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 5.8e-78 295.0 275 57.8
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 5.8e-78 295.0 238 65.1
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.3e-77 293.9 279 57.0
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.7e-77 293.5 265 55.5
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 2.2e-77 293.1 268 57.8
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 2.2e-77 293.1 279 57.3
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 4.9e-77 292.0 278 57.9
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 3.2e-76 289.3 266 55.3
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 5.5e-76 288.5 268 56.0
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.2e-75 287.3 269 57.2
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.7e-75 286.2 268 56.3
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 4.6e-75 285.4 272 58.1
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.0e-75 285.0 264 56.1
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 3.0e-74 282.7 208 69.7
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 3.9e-74 282.3 270 55.9
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 6.7e-74 281.6 273 53.8
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 8.7e-74 281.2 268 56.0
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 4.3e-73 278.9 274 54.0
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 7.4e-73 278.1 274 52.6
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 2.1e-72 276.6 268 54.5
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 4.8e-72 275.4 255 57.3
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 2.4e-71 273.1 260 51.5
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.0e-71 272.3 279 51.3
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.0e-71 272.3 275 50.5
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 9.0e-71 271.2 275 50.9
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 7.6e-70 268.1 289 51.2
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 7.6e-70 268.1 265 54.3
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 1.3e-69 267.3 268 53.0
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 3.8e-69 265.8 261 55.2
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 1.2e-67 260.8 270 54.1
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 3.5e-67 259.2 183 71.0
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.5e-65 253.8 256 55.9
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 3.3e-65 252.7 222 60.4
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.8e-64 249.6 285 48.1
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 3.1e-63 246.1 208 62.5
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 1.3e-61 240.7 225 57.3
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 8.5e-61 238.0 270 50.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 9.3e-60 234.6 267 46.1
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.6e-59 233.8 221 58.8
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 2.7e-59 233.0 224 52.7
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 4.6e-59 232.3 268 46.3
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.1e-59 231.9 229 50.2
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 7.9e-59 231.5 229 51.1
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.6e-56 223.8 239 51.5
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.8e-55 220.3 256 46.1
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 5.9e-54 215.3 260 43.8
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 4.6e-51 205.7 185 58.4
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.0e-49 200.3 177 55.9
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.3e-48 197.6 170 59.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 5.3e-47 192.2 175 54.3
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.1e-43 180.3 141 68.1
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 5.3e-31 139.0 85 88.2
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 6.8e-26 122.1 109 52.3
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 1.0e-18 98.2 272 33.1
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.8e-13 79.7 59 59.3
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 8.6e-13 78.6 59 59.3
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 8.9e-10 68.6 93 50.5
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.4e-09 66.6 59 54.2
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.1e-07 61.6 44 61.4
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 4.6e-06 56.2 59 50.8
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 5.9e-06 55.8 43 53.5


User provided reference genes

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