Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010776 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 2.9e-36 154.5 65 100.0
CSS0000686 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 1.0e-20 102.8 46 91.3
CSS0007282 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 1.0e-20 102.8 46 91.3
CSS0037612 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 3.7e-15 84.3 38 89.5
Dinv17741 Davidia involucrata HOM05D002863 ORTHO05D005691 3.1e-14 81.3 43 74.4
Ciclev10004283m.g Citrus clementina HOM05D002863 ORTHO05D005691 4.2e-11 70.9 42 61.9
Thecc.04G235200 Theobroma cacao HOM05D002863 ORTHO05D005691 7.2e-11 70.1 45 60.0
Rhsim05G0149800 Rhododendron simsii HOM05D002863 ORTHO05D005691 4.6e-10 67.4 32 81.2
COL.COLO4_21516 Corchorus olitorius HOM05D002863 ORTHO05D005691 6.1e-10 67.0 42 69.0
COL.COLO4_13640 Corchorus olitorius HOM05D002863 ORTHO05D005691 1.0e-09 66.2 37 70.3
TAR636G1187 Trochodendron aralioides HOM05D002863 ORTHO05D005691 1.0e-09 66.2 49 61.2
Duzib177G0218 Durio zibethinus HOM05D002863 ORTHO05D005691 2.3e-09 65.1 33 75.8
GSVIVG01018011001 Vitis vinifera HOM05D002863 ORTHO05D005691 2.3e-09 65.1 42 61.9
AUR62005129 Chenopodium quinoa HOM05D002863 ORTHO05D005691 5.1e-09 63.9 41 61.0
Ciclev10000353m.g Citrus clementina HOM05D002863 ORTHO05D005691 5.1e-09 63.9 30 83.3
Duzib151G1175 Durio zibethinus HOM05D002863 ORTHO05D005691 5.1e-09 63.9 42 59.5
Potri.008G155400 Populus trichocarpa HOM05D002863 ORTHO05D005691 6.7e-09 63.5 45 57.8
Dinv14015 Davidia involucrata HOM05D002863 ORTHO05D005691 8.7e-09 63.2 43 58.1
AUR62000846 Chenopodium quinoa HOM05D002863 ORTHO05D005691 3.3e-08 61.2 41 58.5
QL06p001686 Quercus lobata HOM05D002863 ORTHO05D005691 4.3e-08 60.8 40 55.0
Manes.03G175900 Manihot esculenta HOM05D002863 ORTHO05D005691 5.7e-08 60.5 42 59.5
Oeu018974.1 Olea europaea HOM05D002863 ORTHO05D005691 5.7e-08 60.5 42 59.5
Potri.005G047500 Populus trichocarpa HOM05D002863 ORTHO05D005691 5.7e-08 60.5 33 72.7
Atru.chr4.2430 Acer truncatum HOM05D002863 ORTHO05D005691 7.4e-08 60.1 42 61.9
Aqoxy5G00438 Aquilegia oxysepala HOM05D002863 ORTHO05D005691 7.4e-08 60.1 42 57.1
PGR004G0456 Punica granatum HOM05D002863 ORTHO05D005691 7.4e-08 60.1 35 68.6
Sc13g0004580 Simmondsia chinensis HOM05D002863 ORTHO05D005691 7.4e-08 60.1 43 53.5
RcHm_v2.0_Chr4g0415581 Rosa chinensis HOM05D002863 ORTHO05D005691 9.7e-08 59.7 41 61.0
CAN.G231.13 Capsicum annuum HOM05D002863 ORTHO05D005691 1.3e-07 59.3 40 55.0
ClCG06G006340 Citrullus lanatus HOM05D002863 ORTHO05D005691 1.6e-07 58.9 32 71.9
Gohir.A09G217400 Gossypium hirsutum HOM05D002863 ORTHO05D005691 1.6e-07 58.9 37 64.9
CiPaw.01G198300 Carya illinoinensis HOM05D002863 ORTHO05D005691 2.2e-07 58.5 40 55.0
Gohir.D11G266600 Gossypium hirsutum HOM05D002863 ORTHO05D005691 2.2e-07 58.5 25 84.0
CSS0031002 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 2.8e-07 58.2 42 54.8
Haze_11201 Corylus avellana HOM05D002863 ORTHO05D005691 3.7e-07 57.8 40 57.5
Gorai.007G286400 Gossypium raimondii HOM05D002863 ORTHO05D005691 3.7e-07 57.8 25 84.0
Peaxi162Scf00131g00027 Petunia axillaris HOM05D002863 ORTHO05D005691 3.7e-07 57.8 44 54.5
CSS0024605 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 4.8e-07 57.4 42 57.1
CSS0027055 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 4.8e-07 57.4 42 57.1
Hund10646 Selenicereus undatus HOM05D002863 ORTHO05D005691 4.8e-07 57.4 40 55.0
TWI53G0907 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 4.8e-07 57.4 45 53.3
DCAR_002375 Daucus carota HOM05D002863 ORTHO05D005691 6.3e-07 57.0 43 60.5
Gohir.A11G256800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 6.3e-07 57.0 25 80.0
Lj3A732T73 Lonicera japonica HOM05D002863 ORTHO05D005691 6.3e-07 57.0 25 80.0
Nitab4.5_0006783g0030 Nicotiana tabacum HOM05D002863 ORTHO05D005691 6.3e-07 57.0 43 51.2
Gorai.006G240800 Gossypium raimondii HOM05D002863 ORTHO05D005691 8.2e-07 56.6 30 70.0
PGSC0003DMG400016310 Solanum tuberosum HOM05D002863 ORTHO05D005691 8.2e-07 56.6 43 51.2
Nitab4.5_0000321g0190 Nicotiana tabacum HOM05D002863 ORTHO05D005691 1.1e-06 56.2 39 53.8
Thhalv10006684m.g Eutrema salsugineum HOM05D002863 ORTHO05D005691 1.4e-06 55.8 49 49.0
Sed0023639 Sechium edule HOM05D002863 ORTHO05D005691 1.4e-06 55.8 45 48.9
Carub.0001s0479 Capsella rubella HOM05D002863 ORTHO05D005691 1.8e-06 55.5 41 53.7
Cfa008472 Carpinus fangiana HOM05D002863 ORTHO05D005691 1.8e-06 55.5 40 55.0
Nitab4.5_0002361g0230 Nicotiana tabacum HOM05D002863 ORTHO05D005691 1.8e-06 55.5 33 66.7
Rhsim04G0200000 Rhododendron simsii HOM05D002863 ORTHO05D005691 1.8e-06 55.5 42 52.4
CANSAT78G2191 Cannabis sativa HOM05D002863 ORTHO05D005691 2.4e-06 55.1 35 65.7
Cpa.g.sc117.40 Carica papaya HOM05D002863 ORTHO05D005691 2.4e-06 55.1 31 67.7
MELO3C012664.2 Cucumis melo HOM05D002863 ORTHO05D005691 2.4e-06 55.1 31 67.7
CsaV3_7G022380 Cucumis sativus L. HOM05D002863 ORTHO05D005691 3.1e-06 54.7 31 67.7
Eucgr.H03436 Eucalyptus grandis HOM05D002863 ORTHO05D005691 3.1e-06 54.7 52 48.1
Thecc.05G291200 Theobroma cacao HOM05D002863 ORTHO05D005691 3.1e-06 54.7 26 76.9
PSO210G3945 Papaver somniferum HOM05D002863 ORTHO05D005691 4.1e-06 54.3 26 80.8
PSO832G1692 Papaver somniferum HOM05D002863 ORTHO05D005691 4.1e-06 54.3 26 80.8
Eucgr.H04399 Eucalyptus grandis HOM05D002863 ORTHO05D005691 5.3e-06 53.9 44 54.5
Gohir.D09G219800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 5.3e-06 53.9 30 66.7
Sopen06g019190 Solanum pennellii HOM05D002863 ORTHO05D005691 5.3e-06 53.9 42 47.6
ECA236G4457 Erigeron canadensis HOM05D002863 ORTHO05D005691 9.0e-06 53.1 46 45.7
Lsat_1_v5_gn_9_80360 Lactuca sativa HOM05D002863 ORTHO05D005691 9.0e-06 53.1 50 44.0
Sed0008697 Sechium edule HOM05D002863 ORTHO05D005691 9.0e-06 53.1 28 71.4


User provided reference genes

Program Settings