Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010227 Camellia sinensis var. sinensis HOM05D001780 ORTHO05D022113 2.3e-176 622.1 308 100.0
Dinv29743 Davidia involucrata HOM05D001780 ORTHO05D005322 2.4e-48 196.8 267 46.8
Duzib160G0626 Durio zibethinus HOM05D001780 ORTHO05D005322 2.7e-47 193.4 292 41.4
Gorai.006G096300 Gossypium raimondii HOM05D001780 ORTHO05D005322 3.8e-46 189.5 298 41.6
TAR362G0169 Trochodendron aralioides HOM05D001780 ORTHO05D005322 8.5e-46 188.3 299 41.5
Gohir.D09G080700 Gossypium hirsutum HOM05D001780 ORTHO05D005322 1.1e-45 188.0 298 41.6
QL06p008943 Quercus lobata HOM05D001780 ORTHO05D005322 1.1e-45 188.0 274 42.3
Migut.G00161 Erythranthe guttata HOM05D001780 ORTHO05D005322 2.5e-45 186.8 268 41.4
Lsat_1_v5_gn_3_30900 Lactuca sativa HOM05D001780 ORTHO05D005322 3.2e-45 186.4 134 65.7
Haze_01199 Corylus avellana HOM05D001780 ORTHO05D005322 1.2e-44 184.5 274 42.3
Lsat_1_v5_gn_7_51800 Lactuca sativa HOM05D001780 ORTHO05D022113 1.2e-44 184.5 134 64.9
AL8G22430 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 2.7e-44 183.3 168 56.5
C07p39660 Brassica napus HOM05D001780 ORTHO05D005322 2.7e-44 183.3 168 56.0
Thecc.02G218100 Theobroma cacao HOM05D001780 ORTHO05D005322 6.1e-44 182.2 273 42.1
BolC7t44489H Brassica oleracea HOM05D001780 ORTHO05D005322 1.0e-43 181.4 174 55.7
Cfa015386 Carpinus fangiana HOM05D001780 ORTHO05D005322 1.0e-43 181.4 275 42.5
Gohir.A09G080700 Gossypium hirsutum HOM05D001780 ORTHO05D005322 4.0e-43 179.5 273 41.4
ECA240G0962 Erigeron canadensis HOM05D001780 ORTHO05D005322 5.2e-43 179.1 168 54.8
SalBow2G1454 Salvia bowleyana HOM05D001780 ORTHO05D005322 8.8e-43 178.3 261 41.0
Aqoxy2G02980_Aqoxy2G02981 Aquilegia oxysepala HOM05D001780 ORTHO05D005322 1.2e-42 177.9 168 56.0
Sp2g19410 Schrenkiella parvula HOM05D001780 ORTHO05D005322 2.0e-42 177.2 168 55.4
AL8G22410 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 4.4e-42 176.0 168 55.4
Lj6A676G61 Lonicera japonica HOM05D001780 ORTHO05D005322 4.4e-42 176.0 207 48.3
THA.LOC104818925 Tarenaya hassleriana HOM05D001780 ORTHO05D005322 5.7e-42 175.6 168 53.6
Peaxi162Scf00048g01820 Petunia axillaris HOM05D001780 ORTHO05D005322 9.8e-42 174.9 276 39.9
AT5G49030 Arabidopsis thaliana HOM05D001780 ORTHO05D005322 1.3e-41 174.5 168 54.8
DCAR_002465 Daucus carota HOM05D001780 ORTHO05D005322 1.3e-41 174.5 282 40.8
Nitab4.5_0000059g0580 Nicotiana tabacum HOM05D001780 ORTHO05D005322 1.3e-41 174.5 268 40.3
A06p38600 Brassica napus HOM05D001780 ORTHO05D005322 1.7e-41 174.1 168 54.2
MD16G1168800 Malus domestica HOM05D001780 ORTHO05D005322 1.7e-41 174.1 273 40.7
CiPaw.01G148500 Carya illinoinensis HOM05D001780 ORTHO05D005322 2.2e-41 173.7 275 40.0
MD13G1168400 Malus domestica HOM05D001780 ORTHO05D005322 2.2e-41 173.7 266 41.0
PSO170G3623 Papaver somniferum HOM05D001780 ORTHO05D005322 2.2e-41 173.7 168 53.0
PSO210G4510 Papaver somniferum HOM05D001780 ORTHO05D005322 2.2e-41 173.7 168 53.0
PGSC0003DMG400006289 Solanum tuberosum HOM05D001780 ORTHO05D005322 2.2e-41 173.7 268 40.3
C02p57010 Brassica napus HOM05D001780 ORTHO05D005322 2.8e-41 173.3 168 53.6
BolC2t11771H Brassica oleracea HOM05D001780 ORTHO05D005322 2.8e-41 173.3 168 53.6
Nitab4.5_0000700g0090 Nicotiana tabacum HOM05D001780 ORTHO05D005322 2.8e-41 173.3 268 39.9
CARHR182680 Cardamine hirsuta HOM05D001780 ORTHO05D005322 3.7e-41 172.9 168 54.2
Carub.0008s0885 Capsella rubella HOM05D001780 ORTHO05D005322 4.8e-41 172.6 168 54.2
Thhalv10003524m.g Eutrema salsugineum HOM05D001780 ORTHO05D005322 6.3e-41 172.2 168 54.2
Prupe.1G136500 Prunus persica HOM05D001780 ORTHO05D005322 6.3e-41 172.2 274 40.1
Solyc01g080810.3 Solanum lycopersicum HOM05D001780 ORTHO05D005322 1.1e-40 171.4 268 39.9
BcaC03g17692 Brassica carinata HOM05D001780 ORTHO05D005322 1.4e-40 171.0 168 53.6
CANSAT78G1960 Cannabis sativa HOM05D001780 ORTHO05D005322 1.8e-40 170.6 261 39.8
Manes.03G195400 Manihot esculenta HOM05D001780 ORTHO05D005322 1.8e-40 170.6 168 53.0
HanXRQChr03g0080971 Helianthus annuus HOM05D001780 ORTHO05D005322 2.4e-40 170.2 265 41.9
RcHm_v2.0_Chr4g0422271 Rosa chinensis HOM05D001780 ORTHO05D005322 3.1e-40 169.9 272 39.0
PGR004G0386 Punica granatum HOM05D001780 ORTHO05D005322 4.1e-40 169.5 272 40.4
Psat1g153920 Pisum sativum HOM05D001780 ORTHO05D005322 7.0e-40 168.7 275 40.0
Ciclev10004211m.g Citrus clementina HOM05D001780 ORTHO05D005322 9.1e-40 168.3 273 39.9
Ca_01936_v3 Cicer arietinum L. HOM05D001780 ORTHO05D005322 1.6e-39 167.5 272 40.8
FvH4_4g18060 Fragaria vesca HOM05D001780 ORTHO05D005322 2.0e-39 167.2 275 39.6
Medtr2g436760 Medicago truncatula HOM05D001780 ORTHO05D005322 2.0e-39 167.2 168 51.8
Potri.010G014500 Populus trichocarpa HOM05D001780 ORTHO05D005322 2.7e-39 166.8 306 37.6
Sc13g0003450 Simmondsia chinensis HOM05D001780 ORTHO05D005322 2.7e-39 166.8 168 51.2
arahy.Tifrunner.gnm1.ann1.A68CME Arachis hypogaea HOM05D001780 ORTHO05D005322 4.5e-39 166.0 168 50.0
Lj6g0027734 Lotus japonicus HOM05D001780 ORTHO05D005322 5.9e-39 165.6 276 38.8
Ah.01g003180 Amaranthus hybridus HOM05D001780 ORTHO05D005322 7.7e-39 165.2 168 51.8
CsaV3_3G014640 Cucumis sativus L. HOM05D001780 ORTHO05D005322 1.0e-38 164.9 168 51.2
Sopen01g030670 Solanum pennellii HOM05D001780 ORTHO05D005322 1.0e-38 164.9 184 47.8
Hund03251 Selenicereus undatus HOM05D001780 ORTHO05D005322 1.3e-38 164.5 168 50.6
Glyma.17G026600 Glycine max HOM05D001780 ORTHO05D005322 1.7e-38 164.1 300 38.3
Nn3g18527 Nelumbo nucifera HOM05D001780 ORTHO05D005322 1.7e-38 164.1 168 50.6
TWI09G1280 Tripterygium wilfordii HOM05D001780 ORTHO05D005322 1.7e-38 164.1 272 40.1
Lalb_Chr15g0083491 Lupinus albus HOM05D001780 ORTHO05D005322 2.9e-38 163.3 302 36.8
Sed0021413 Sechium edule HOM05D001780 ORTHO05D005322 2.9e-38 163.3 168 51.2
CAN.G185.34 Capsicum annuum HOM05D001780 ORTHO05D005322 5.0e-38 162.5 184 47.3
SGA_v2.0_scaffold67G22635 Striga asiatica HOM05D001780 ORTHO05D005322 5.0e-38 162.5 235 42.6
FAN12G1911 Fragaria x ananassa HOM05D001780 ORTHO05D005322 8.6e-38 161.8 274 39.1
Rhsim04G0222400 Rhododendron simsii HOM05D001780 ORTHO05D005322 1.1e-37 161.4 275 37.8
CDE01G0296 Ceratophyllum demersum HOM05D001780 ORTHO05D005322 1.5e-37 161.0 168 50.6
Eucgr.H03916 Eucalyptus grandis HOM05D001780 ORTHO05D005322 1.9e-37 160.6 273 38.5
FAN12G3693 Fragaria x ananassa HOM05D001780 ORTHO05D005322 1.9e-37 160.6 274 38.7
CDE12G0042 Ceratophyllum demersum HOM05D001780 ORTHO05D005322 5.5e-37 159.1 168 50.0
VMungo1215G2474 Vigna mungo HOM05D001780 ORTHO05D005322 5.5e-37 159.1 300 37.7
Phvul.003G105600 Phaseolus vulgaris HOM05D001780 ORTHO05D005322 7.2e-37 158.7 300 38.3
AUR62029200 Chenopodium quinoa HOM05D001780 ORTHO05D005322 1.2e-36 157.9 168 48.8
AUR62014941 Chenopodium quinoa HOM05D001780 ORTHO05D005322 2.1e-36 157.1 168 48.8
COL.COLO4_34741 Corchorus olitorius HOM05D001780 ORTHO05D005322 8.0e-36 155.2 201 43.3
EL10Ac9g22594 Beta vulgaris HOM05D001780 ORTHO05D005322 1.0e-35 154.8 174 48.3
Os02g0778200 Oryza sativa ssp. japonica HOM05D001780 ORTHO05D005322 1.0e-35 154.8 168 48.2
ATR0796G005 Amborella trichopoda HOM05D001780 ORTHO05D005322 4.0e-35 152.9 168 47.6
Zm00001eb256880 Zea mays HOM05D001780 ORTHO05D005322 1.5e-34 151.0 168 47.6
Atru.chr4.2840 Acer truncatum HOM05D001780 ORTHO05D005322 2.2e-33 147.1 161 49.1
A02p37850 Brassica napus HOM05D001780 ORTHO05D005322 2.8e-33 146.7 168 47.0
BraA02t08767Z Brassica rapa HOM05D001780 ORTHO05D005322 2.8e-33 146.7 168 47.0
Sabra10G0009300 Salix brachista HOM05D001780 ORTHO05D005322 2.8e-33 146.7 135 55.6
SEGI_15432 Sequoiadendron giganteum HOM05D001780 ORTHO05D005322 2.8e-33 146.7 168 46.4
GSVIVG01017762001 Vitis vinifera HOM05D001780 ORTHO05D005322 4.9e-33 146.0 390 31.3
AagrBONN_evm.TU.Sc2ySwM_340.179 Anthoceros agrestis HOM05D001780 ORTHO05D005322 4.1e-32 142.9 183 43.7
Pp3c17_5990 Physcomitrium patens HOM05D001780 ORTHO05D005322 7.0e-32 142.1 168 45.2
arahy.Tifrunner.gnm1.ann1.I7AL06 Arachis hypogaea HOM05D001780 ORTHO05D005322 4.5e-31 139.4 135 52.6
FAN07G2352 Fragaria x ananassa HOM05D000639 ORTHO05D005322 1.1e-29 134.8 149 51.0
FAN17G0722 Fragaria x ananassa HOM05D001780 ORTHO05D005322 1.1e-29 134.8 147 51.0
Mapoly0002s0241 Marchantia polymorpha HOM05D001780 ORTHO05D005322 4.3e-29 132.9 168 41.7
COL.COLO4_04960 Corchorus olitorius HOM05D001780 ORTHO05D005322 7.3e-29 132.1 134 50.0
Cpa.g.sc16.173 Carica papaya HOM05D001780 ORTHO05D005322 4.7e-28 129.4 145 48.3
HanXRQChr13g0411251 Helianthus annuus HOM05D001780 ORTHO05D005322 4.0e-27 126.3 88 70.5
Aa31sc180G20 Aethionema arabicum HOM05D001780 ORTHO05D005322 2.6e-26 123.6 168 41.7
BraA06t26775Z Brassica rapa HOM05D001780 ORTHO05D005322 2.9e-25 120.2 168 41.1
ClCG05G006110 Citrullus lanatus HOM05D001780 ORTHO05D005322 1.4e-24 117.9 149 45.6
SMO230G0004 Selaginella moellendorffii HOM05D001780 ORTHO05D005322 1.6e-23 114.4 168 36.3
SMO367G0518 Selaginella moellendorffii HOM05D001780 ORTHO05D005322 1.6e-23 114.4 168 36.3
HPP92_016436 Vanilla planifolia HOM05D001780 ORTHO05D005322 3.9e-22 109.8 168 37.5
vmacro08154 Vaccinium macrocarpon HOM05D001780 ORTHO05D005322 6.6e-22 109.0 58 86.2
MBI19_g44149_MAGBIO Magnolia biondii HOM05D001780 ORTHO05D005322 1.5e-21 107.8 112 55.4
vmacro08155 Vaccinium macrocarpon HOM05D001780 ORTHO05D005322 1.5e-21 107.8 100 55.0
MCO13G360 Micromonas commoda HOM05D001780 ORTHO05D005322 1.2e-20 104.8 160 36.9
PRCOL_00005558 Prasinoderma coloniale HOM05D001780 ORTHO05D005322 8.0e-20 102.1 173 38.2
Lsat_1_v5_gn_9_91680 Lactuca sativa HOM05D001780 ORTHO05D005322 1.8e-19 100.9 74 62.2
CSS0045525 Camellia sinensis var. sinensis HOM05D001780 ORTHO05D022113 2.3e-19 100.5 77 66.2
CSS0032424 Camellia sinensis var. sinensis HOM05D001780 ORTHO05D005322 4.0e-19 99.8 58 77.6
ClCG00G005040 Citrullus lanatus HOM05D001780 ORTHO05D005322 6.8e-19 99.0 105 53.3
Cre16.g689871 Chlamydomonas reinhardtii HOM05D001780 ORTHO05D005322 2.9e-17 93.6 167 34.1
Cc03_g01900 Coffea canephora HOM05D001780 ORTHO05D005322 8.3e-17 92.0 58 72.4
Cc03_g01890 Coffea canephora HOM05D001780 ORTHO05D005322 1.1e-16 91.7 193 33.7
Actinidia40255 Actinidia chinensis HOM05D001780 ORTHO05D005322 5.4e-16 89.4 85 58.8
unitig_0.g2594 Utricularia gibba HOM05D001780 ORTHO05D005322 1.2e-15 88.2 134 38.8
TPR.G13843 Trifolium pratense HOM05D001780 ORTHO05D005322 1.3e-14 84.7 88 53.4
TAR383G0182 Trochodendron aralioides HOM05D001780 ORTHO05D005322 4.3e-13 79.7 145 37.2
RcHm_v2.0_Chr2g0162141 Rosa chinensis HOM05D001780 ORTHO05D022113 2.0e-10 70.9 59 57.6
Cfa026798 Carpinus fangiana HOM05D001780 ORTHO05D005322 5.8e-10 69.3 86 39.5
Ca_28665_v3 Cicer arietinum L. HOM05D001780 ORTHO05D005322 1.3e-09 68.2 173 26.6
Pp3s46_440 Physcomitrium patens HOM05D001780 ORTHO05D005322 2.9e-09 67.0 175 26.9


User provided reference genes

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