Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.3e-122 441.0 222 100.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-115 418.7 239 90.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-113 413.3 239 88.7
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 3.5e-102 375.2 241 80.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.5e-102 375.2 232 81.9
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 5.7e-100 367.9 261 75.1
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 6.3e-99 364.4 230 78.3
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 8.2e-99 364.0 231 79.7
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.8e-98 362.8 237 78.1
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.8e-98 362.8 231 78.8
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 2.4e-98 362.5 233 79.0
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.0e-98 360.5 239 75.7
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.0e-97 359.4 234 76.5
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.0e-97 359.4 230 78.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 2.6e-97 359.0 239 76.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.4e-97 358.6 234 76.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.3e-96 356.7 235 76.6
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.3e-96 356.7 235 76.6
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 2.9e-96 355.5 239 75.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 8.5e-96 354.0 235 74.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 8.5e-96 354.0 235 74.9
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.1e-95 353.6 235 74.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.9e-95 352.8 239 74.1
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.9e-95 352.8 232 76.3
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 2.5e-95 352.4 234 75.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 3.2e-95 352.1 239 75.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 9.4e-95 350.5 235 74.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 9.4e-95 350.5 233 76.4
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.2e-94 350.1 220 80.9
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.2e-94 350.1 232 75.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.1e-94 349.4 233 75.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.1e-94 349.4 234 75.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.7e-94 349.0 247 72.5
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 6.1e-94 347.8 233 75.1
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.0e-93 347.1 230 75.7
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.4e-93 346.7 239 73.6
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.8e-93 346.3 235 71.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.8e-93 346.3 242 74.0
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 3.0e-93 345.5 232 75.4
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 3.9e-93 345.1 233 73.8
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.9e-93 345.1 228 73.2
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 8.8e-93 344.0 234 71.8
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-92 343.6 233 73.0
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.5e-92 343.2 232 72.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.5e-92 342.4 232 72.4
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.5e-92 342.4 231 71.9
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.5e-92 342.4 234 74.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 3.3e-92 342.0 239 72.4
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 4.3e-92 341.7 232 74.1
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 4.3e-92 341.7 231 74.5
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 7.4e-92 340.9 232 72.0
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 7.4e-92 340.9 231 71.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.4e-92 340.9 252 70.6
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.3e-91 340.1 237 72.2
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.7e-91 339.7 269 66.9
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.2e-91 339.3 234 73.5
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.8e-91 339.0 232 71.6
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 8.2e-91 337.4 234 70.9
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.1e-90 337.0 247 69.6
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.4e-90 336.7 234 69.7
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.6e-89 332.4 230 71.7
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.6e-89 332.4 233 70.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.7e-89 330.9 233 70.0
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 7.7e-89 330.9 233 70.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.7e-88 329.7 233 70.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.8e-88 328.6 234 71.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.0e-88 328.2 225 73.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.5e-88 327.8 220 73.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 8.5e-88 327.4 226 70.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.1e-87 327.0 186 86.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.5e-87 325.9 232 69.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 4.7e-86 321.6 234 69.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.8e-85 319.7 231 68.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.8e-85 319.7 234 68.4
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 5.1e-85 318.2 186 83.9
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.8e-85 317.4 233 67.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 2.0e-84 316.2 233 66.1
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.4e-84 314.3 259 67.2
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.2e-83 310.8 256 62.5
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.1e-82 310.5 235 68.1
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.9e-80 302.4 277 58.5
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 5.0e-80 301.6 224 66.1
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.1e-79 300.4 224 66.5
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.5e-79 300.1 233 67.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.2e-79 298.9 224 66.1
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.4e-76 288.5 180 76.1
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.5e-76 287.7 246 60.6
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.4e-74 282.7 255 58.0
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 5.9e-73 278.1 191 71.7
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.7e-73 277.7 155 85.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 2.2e-72 276.2 239 65.3
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.2e-71 271.9 192 73.4
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 5.5e-71 271.6 192 70.8
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.0e-69 265.4 191 71.7
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.2e-68 263.8 227 58.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 4.4e-68 261.9 222 59.9
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 8.3e-67 257.7 284 50.7
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.0e-64 250.8 182 70.3
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 3.2e-63 245.7 191 68.6
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-62 243.8 171 74.3
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-62 243.4 182 68.1
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-62 243.4 182 68.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.1e-62 243.0 162 71.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 6.1e-62 241.5 149 79.2
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.3e-61 239.6 234 52.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.7e-57 226.1 220 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 2.8e-54 216.1 222 50.5
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 9.8e-52 207.6 221 47.1
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.0e-40 169.5 147 60.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 8.9e-37 157.9 143 60.1
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.1e-34 151.0 119 65.5
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.2e-30 137.5 118 62.7
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 8.9e-29 131.3 90 72.2
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.5e-28 130.6 96 77.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 6.4e-27 125.2 86 70.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.1e-26 124.4 61 96.7
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.9e-24 115.9 71 74.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 6.2e-22 108.6 55 89.1
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.9e-19 99.0 109 56.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 9.6e-15 84.7 152 34.2
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.4e-10 68.9 72 52.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.6e-09 67.4 50 66.0


User provided reference genes

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