Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.4e-119 432.2 218 100.0
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.5e-40 167.9 152 63.2
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.8e-37 160.2 136 63.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 6.7e-37 158.3 152 59.2
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 6.7e-37 158.3 152 55.3
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 8.7e-37 157.9 152 57.9
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 9.7e-36 154.5 152 55.3
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.3e-35 154.1 152 55.3
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.6e-35 153.7 153 55.6
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.2e-35 153.3 152 55.3
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 2.2e-35 153.3 152 54.6
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 3.7e-35 152.5 136 58.8
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 8.2e-35 151.4 151 55.6
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.1e-34 151.0 129 62.0
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.1e-34 151.0 150 58.0
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.4e-34 150.6 152 53.9
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.4e-34 150.6 142 59.2
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.8e-34 150.2 129 61.2
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 2.4e-34 149.8 129 59.7
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 2.4e-34 149.8 129 59.7
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.4e-34 149.8 151 53.6
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.1e-34 149.4 129 60.5
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 4.1e-34 149.1 152 53.9
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.1e-34 149.1 152 53.9
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.1e-34 149.1 152 53.9
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 5.3e-34 148.7 95 74.7
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 9.1e-34 147.9 95 73.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 9.1e-34 147.9 129 59.7
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.5e-33 147.1 151 54.3
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.5e-33 147.1 152 53.3
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.5e-33 147.1 95 71.6
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.0e-33 146.7 92 76.1
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 2.0e-33 146.7 129 57.4
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.6e-33 146.4 129 59.7
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.4e-33 146.0 127 59.1
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 3.4e-33 146.0 129 59.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 3.4e-33 146.0 95 72.6
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 3.4e-33 146.0 95 71.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 3.4e-33 146.0 129 59.7
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 4.5e-33 145.6 95 69.5
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 4.5e-33 145.6 95 69.5
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 5.9e-33 145.2 95 71.6
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.7e-32 143.7 129 58.9
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.7e-32 143.7 129 58.9
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.2e-32 143.3 152 52.6
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.9e-32 142.9 152 51.3
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 2.9e-32 142.9 152 51.3
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 1.1e-31 141.0 129 57.4
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.1e-31 141.0 130 56.9
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.9e-31 140.2 129 55.0
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 2.5e-31 139.8 152 52.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.5e-31 139.8 152 50.7
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 3.2e-31 139.4 95 65.3
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 3.2e-31 139.4 151 52.3
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 5.5e-31 138.7 129 58.1
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 5.5e-31 138.7 129 55.0
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 5.5e-31 138.7 153 50.3
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 7.2e-31 138.3 152 50.7
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 7.2e-31 138.3 129 58.1
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 9.4e-31 137.9 129 56.6
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 9.4e-31 137.9 151 51.0
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 9.4e-31 137.9 96 70.8
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.6e-30 137.1 95 68.4
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 1.6e-30 137.1 95 70.5
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.6e-30 137.1 128 57.8
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.1e-30 136.7 129 57.4
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 2.1e-30 136.7 129 56.6
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.0e-29 134.4 129 55.8
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.0e-29 134.4 151 49.7
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 1.0e-29 134.4 95 69.5
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 1.0e-29 134.4 95 66.3
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.8e-29 133.7 95 68.4
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 2.3e-29 133.3 152 50.0
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 2.3e-29 133.3 129 53.5
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 3.9e-29 132.5 97 67.0
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 3.9e-29 132.5 95 65.3
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.9e-29 132.5 95 66.3
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.9e-29 132.5 95 66.3
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 5.1e-29 132.1 152 49.3
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 6.7e-29 131.7 133 52.6
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 6.7e-29 131.7 129 51.9
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.1e-28 131.0 129 52.7
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 1.5e-28 130.6 129 51.2
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.5e-28 130.6 129 51.2
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 1.5e-28 130.6 129 51.2
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 1.5e-28 130.6 95 65.3
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.6e-28 129.8 129 51.2
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 2.6e-28 129.8 129 51.9
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 4.4e-28 129.0 95 63.2
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 5.7e-28 128.6 129 51.9
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 5.7e-28 128.6 94 66.0
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 5.7e-28 128.6 129 51.2
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 9.7e-28 127.9 129 50.4
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 1.3e-27 127.5 129 51.2
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.3e-27 127.5 127 56.7
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.7e-27 127.1 148 50.0
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 1.7e-27 127.1 94 66.0
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 2.2e-27 126.7 129 50.4
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 2.8e-27 126.3 95 61.1
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 3.7e-27 125.9 129 50.4
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 3.7e-27 125.9 129 49.6
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 4.8e-27 125.6 95 63.2
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 6.3e-27 125.2 96 65.6
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 1.8e-26 123.6 149 48.3
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 7.7e-25 118.2 147 46.3
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 1.3e-24 117.5 68 82.4
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.1e-23 114.4 94 57.4
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.4e-23 114.0 95 57.9
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 4.2e-23 112.5 95 55.8
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 9.4e-23 111.3 95 57.9
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 9.4e-23 111.3 95 55.8
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 9.4e-23 111.3 95 55.8
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 2.1e-22 110.2 95 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.7e-21 105.1 95 55.8
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 6.7e-21 105.1 95 57.9
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 6.7e-21 105.1 95 57.9
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 6.7e-21 105.1 97 57.7
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.1e-20 104.4 91 58.2
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.5e-20 104.0 89 53.9
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.0e-20 103.6 95 56.8
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-20 102.8 94 52.1
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.3e-20 102.8 94 56.4
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.4e-20 101.7 94 58.5
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 8.2e-19 98.2 100 55.0
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.0e-16 91.3 120 46.7
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.3e-13 80.1 65 61.5
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 3.0e-13 79.7 96 46.9
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 4.8e-11 72.4 94 43.6
CSS0009310 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D110656 1.0e-08 64.7 67 62.7
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 6.5e-08 62.0 30 90.0
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 9.4e-07 58.2 35 82.9
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.2e-06 57.8 30 83.3


User provided reference genes

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