Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 4.8e-265 917.9 727 100.0
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 1.7e-124 451.1 581 77.5
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 4.8e-124 449.5 585 80.9
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 6.3e-124 449.1 583 82.3
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 9.1e-123 445.3 583 78.7
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 3.8e-121 439.9 581 77.6
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 3.8e-121 439.9 585 80.2
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 7.2e-120 435.6 585 78.3
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 1.4e-118 431.4 585 80.3
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 4.0e-118 429.9 583 80.3
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 1.2e-117 428.3 583 73.6
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.0e-117 427.6 585 80.0
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 3.4e-117 426.8 585 80.5
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 7.5e-117 425.6 581 80.2
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 1.2e-114 418.3 583 78.2
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 2.9e-113 413.7 585 75.0
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 1.9e-112 411.0 587 73.8
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 7.3e-112 409.1 583 78.6
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.2e-111 408.3 594 69.5
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 1.8e-110 404.4 585 77.8
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 6.8e-110 402.5 583 75.3
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 6.8e-110 402.5 581 78.7
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 2.0e-109 401.0 585 75.4
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 4.4e-109 399.8 585 75.2
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 2.2e-108 397.5 585 75.9
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 1.4e-107 394.8 585 75.2
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 6.0e-106 389.4 583 72.9
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 7.8e-106 389.0 585 74.5
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 1.3e-105 388.3 514 82.5
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 5.0e-105 386.3 585 75.2
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 5.6e-104 382.9 581 76.6
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 1.2e-103 381.7 602 76.4
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 2.8e-103 380.6 583 57.6
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 6.2e-103 379.4 583 72.2
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 8.0e-103 379.0 588 73.0
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 1.2e-101 375.2 591 71.1
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 1.5e-101 374.8 585 74.5
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 2.6e-101 374.0 581 73.8
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 3.4e-101 373.6 583 72.7
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.7e-100 371.3 574 62.9
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 2.9e-100 370.5 600 71.5
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 3.2e-99 367.1 589 72.2
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 4.1e-99 366.7 583 77.0
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 7.1e-99 365.9 585 71.1
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 1.2e-98 365.2 514 67.9
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 2.1e-98 364.4 587 71.2
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 1.3e-97 361.7 564 76.8
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 3.0e-97 360.5 505 78.6
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 5.1e-97 359.8 585 72.3
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 3.6e-95 353.6 514 76.8
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 6.2e-95 352.8 583 71.9
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 6.2e-95 352.8 365 72.3
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 5.2e-94 349.7 591 69.9
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 8.9e-94 349.0 589 70.5
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 2.6e-93 347.4 587 61.3
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 6.4e-92 342.8 585 74.0
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 3.2e-91 340.5 585 71.3
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 5.4e-91 339.7 585 72.6
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 1.2e-90 338.6 586 72.0
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.2e-90 338.6 585 71.8
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 6.0e-90 336.3 563 71.0
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 6.0e-90 336.3 583 71.0
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 1.7e-89 334.7 557 70.4
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 3.9e-89 333.6 582 72.5
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 8.6e-89 332.4 564 75.9
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 4.3e-88 330.1 584 72.1
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 2.1e-87 327.8 315 69.2
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 4.7e-87 326.6 562 71.2
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 3.1e-86 323.9 591 66.7
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 5.2e-86 323.2 539 71.4
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 1.2e-85 322.0 587 70.4
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 7.6e-85 319.3 586 69.8
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.9e-83 314.7 286 77.6
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 2.7e-82 310.8 641 60.7
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 3.5e-82 310.5 584 70.9
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 3.5e-82 310.5 583 71.0
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 3.5e-82 310.5 685 63.4
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 3.0e-81 307.4 584 65.9
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 8.7e-81 305.8 584 70.4
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 8.7e-81 305.8 586 69.3
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 8.7e-81 305.8 585 70.4
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 1.1e-80 305.4 630 65.9
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 1.9e-80 304.7 598 62.9
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 4.8e-79 300.1 562 70.6
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 3.1e-78 297.4 366 67.2
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 9.0e-78 295.8 598 61.9
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 4.4e-77 293.5 592 67.1
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 1.6e-74 285.0 366 65.0
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 1.6e-74 285.0 558 61.5
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 3.5e-74 283.9 583 70.2
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 3.9e-73 280.4 443 80.6
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 3.9e-73 280.4 589 68.9
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 2.8e-71 274.2 583 68.3
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 6.2e-71 273.1 586 66.6
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 6.9e-70 269.6 559 42.6
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 3.4e-69 267.3 562 62.3
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 2.2e-68 264.6 222 72.5
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 3.8e-68 263.8 342 66.1
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 5.4e-67 260.0 590 60.5
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 5.1e-65 253.4 593 60.7
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 1.4e-59 235.3 543 65.2
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 6.7e-49 199.9 198 66.7
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 1.1e-48 199.1 583 60.7
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 5.1e-41 173.7 147 62.6
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 3.4e-37 161.0 194 63.9
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 6.7e-33 146.7 121 71.1
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 7.0e-30 136.7 250 35.6
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 1.2e-29 136.0 142 65.5
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 1.2e-29 136.0 142 65.5
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 1.2e-29 136.0 142 65.5
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.6e-29 135.6 150 54.0
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 1.4e-25 122.5 75 81.3
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 1.4e-25 122.5 75 81.3
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 4.0e-25 120.9 75 80.0
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 6.7e-25 120.2 75 76.0
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 8.8e-25 119.8 75 80.0
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.5e-24 119.0 98 67.3
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 5.5e-19 100.5 102 74.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.2e-18 99.4 75 70.7
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 6.1e-18 97.1 60 76.7
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 3.0e-17 94.7 119 65.5
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 9.8e-16 89.7 53 81.1
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 7.0e-14 83.6 295 33.6
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 4.5e-13 80.9 77 48.1
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 2.2e-12 78.6 225 43.6
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 1.9e-11 75.5 121 41.3
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 7.5e-08 63.5 39 76.9


User provided reference genes

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