Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.8e-251 872.1 422 100.0
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.5e-250 868.2 422 99.3
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.2e-222 775.4 423 87.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 8.6e-206 720.3 489 74.8
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 5.2e-203 711.1 481 74.0
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.4e-200 702.2 421 78.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 9.2e-200 700.3 422 78.7
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 4.5e-199 698.0 422 78.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.3e-198 695.7 412 79.9
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 6.6e-198 694.1 423 78.3
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 4.7e-196 688.0 421 77.9
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 3.4e-194 681.8 422 76.8
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.1e-189 666.8 423 74.2
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 4.3e-189 664.8 420 74.5
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.2e-188 663.3 425 72.7
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.1e-187 660.2 424 72.9
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 3.1e-187 658.7 435 71.3
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.4e-184 649.8 425 72.7
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 3.5e-183 645.2 423 71.9
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 3.0e-182 642.1 426 71.4
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 3.3e-181 638.6 426 71.8
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 5.6e-181 637.9 431 69.8
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 5.2e-179 631.3 430 70.9
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 2.6e-178 629.0 424 70.8
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.6e-178 629.0 441 68.7
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 3.4e-178 628.6 452 67.5
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 4.4e-178 628.2 425 70.6
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 9.9e-178 627.1 441 68.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.3e-174 616.7 432 69.9
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 3.0e-174 615.5 426 68.3
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.5e-173 613.2 423 69.5
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 5.6e-173 611.3 410 70.0
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-172 610.1 435 67.1
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 2.1e-172 609.4 424 67.9
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 4.7e-172 608.2 434 67.1
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.2e-170 603.6 441 64.4
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.5e-170 603.2 424 67.5
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 2.6e-170 602.4 427 67.2
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.2e-169 599.4 431 67.1
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 1.1e-168 597.0 413 67.8
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 2.4e-168 595.9 427 66.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 4.1e-168 595.1 431 66.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 7.1e-168 594.3 453 63.8
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 6.0e-167 591.3 372 75.0
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 2.3e-166 589.3 429 65.5
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 8.7e-166 587.4 431 64.0
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.5e-165 586.6 465 61.1
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 8.1e-164 580.9 435 64.1
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.1e-163 578.9 426 63.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.1e-163 578.9 426 63.6
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 3.1e-163 578.9 430 64.4
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 4.0e-163 578.6 426 63.6
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 6.9e-163 577.8 426 63.6
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.3e-161 573.5 426 63.1
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.3e-161 573.5 426 63.1
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.3e-161 573.5 424 63.9
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 8.4e-161 570.9 423 62.9
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.1e-160 570.5 424 63.7
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.4e-160 570.1 432 61.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 3.2e-160 568.9 457 59.7
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.0e-158 563.9 423 62.6
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 2.3e-158 562.8 351 76.6
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 3.9e-158 562.0 418 62.2
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.1e-157 560.5 422 61.4
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.3e-157 558.9 428 64.0
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 1.3e-156 557.0 424 63.0
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.8e-156 555.8 423 62.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.1e-155 553.9 423 61.2
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 2.9e-153 545.8 435 60.2
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 8.7e-150 534.3 424 59.0
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 8.1e-148 527.7 442 57.2
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 4.0e-147 525.4 428 59.1
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 3.2e-144 515.8 426 58.7
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 9.3e-144 514.2 421 57.7
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.8e-142 510.0 421 57.2
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.3e-141 505.4 421 56.8
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.0e-138 496.5 428 57.0
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 3.4e-138 495.7 426 58.2
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-137 493.0 465 57.0
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 6.0e-135 485.0 344 66.3
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 9.7e-133 477.6 385 58.4
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.7e-129 466.8 424 55.7
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.7e-129 466.8 424 55.7
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.2e-124 449.9 408 52.5
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.3e-121 440.7 431 48.3
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.2e-121 439.9 346 61.3
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.4e-117 425.6 334 61.1
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.4e-107 393.3 448 44.9
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.2e-106 391.0 427 44.5
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 7.2e-104 381.7 496 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 6.7e-102 375.2 415 44.3
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 7.2e-96 355.1 249 67.1
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.2e-95 354.4 205 82.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 2.0e-90 337.0 213 74.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-84 317.8 186 80.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.3e-84 315.5 385 42.1
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.3e-81 307.8 180 77.2
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 2.9e-76 290.0 185 75.1
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.7e-66 256.9 186 61.3
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.6e-53 213.8 106 92.5
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 6.4e-52 209.1 147 61.9
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.1e-51 208.4 156 59.6
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 2.5e-48 197.2 147 67.3
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 9.6e-48 195.3 147 66.7
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 2.8e-47 193.7 147 66.0
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 2.8e-47 193.7 147 66.7
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.4e-44 182.2 125 71.2
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.4e-43 181.4 119 73.1
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.9e-43 181.0 128 64.1
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 4.2e-43 179.9 152 54.6
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 4.6e-42 176.4 127 70.9
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 8.7e-41 172.2 101 77.2
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 9.0e-38 162.2 124 59.7
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 1.9e-32 144.4 88 76.1
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.4e-30 138.3 83 75.9
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 4.0e-30 136.7 86 73.3
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 6.4e-28 129.4 135 47.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 1.6e-26 124.8 70 78.6
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.6e-26 124.8 83 65.1
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.7e-25 119.0 80 61.2
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 2.8e-23 114.0 118 52.5
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.4e-22 111.7 88 58.0
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.5e-21 108.2 61 72.1
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 4.2e-19 100.1 59 69.5
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 4.3e-16 90.1 119 42.0
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 5.3e-14 83.2 55 67.3
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 5.9e-13 79.7 59 61.0
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.0e-12 79.0 51 66.7
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 8.5e-12 75.9 150 32.0
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 4.6e-10 70.1 42 71.4
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 2.3e-09 67.8 42 69.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 8.8e-09 65.9 103 36.9
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 2.0e-08 64.7 44 63.6
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 3.3e-08 63.9 103 35.9
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.7e-08 63.2 37 64.9
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 2.8e-07 60.8 103 35.0


User provided reference genes

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