Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009757 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 4.8e-111 404.4 194 100.0
CSS0007096 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 2.7e-98 362.1 194 89.7
CSS0037899 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 9.0e-94 347.1 204 83.8
CSS0026086 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.7e-84 316.2 196 82.1
CSS0003920 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.1e-83 313.5 209 74.6
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.2e-83 312.0 193 79.8
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.2e-83 312.0 193 79.8
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 8.2e-79 297.4 192 78.1
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 1.4e-78 296.6 192 77.1
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 3.6e-74 282.0 192 72.4
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 3.6e-74 282.0 192 72.9
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 8.0e-74 280.8 189 73.0
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 8.0e-74 280.8 191 72.3
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 5.2e-73 278.1 188 72.9
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 5.2e-73 278.1 192 72.9
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 6.7e-73 277.7 189 71.4
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 2.0e-72 276.2 189 72.0
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 2.6e-72 275.8 191 72.8
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 4.4e-72 275.0 191 71.7
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 7.5e-72 274.2 200 67.5
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 7.5e-72 274.2 206 68.0
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 7.5e-72 274.2 191 72.8
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 1.7e-71 273.1 199 70.4
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 2.2e-71 272.7 192 70.3
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 2.2e-71 272.7 192 70.3
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 4.8e-71 271.6 199 67.3
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 4.8e-71 271.6 189 70.9
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 4.8e-71 271.6 189 70.4
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 4.8e-71 271.6 198 69.2
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 1.8e-70 269.6 189 70.4
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 4.1e-70 268.5 189 70.9
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 5.3e-70 268.1 189 69.8
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 7.0e-70 267.7 189 68.8
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 9.1e-70 267.3 189 69.8
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 1.2e-69 266.9 189 69.8
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 1.6e-69 266.5 189 69.8
Rhsim05G0129300 Rhododendron simsii HOM05D003926 ORTHO05D005273 2.7e-69 265.8 196 68.9
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 5.9e-69 264.6 188 69.7
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 5.9e-69 264.6 188 69.7
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 1.0e-68 263.8 189 70.4
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 1.0e-68 263.8 192 68.2
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.0e-68 263.8 192 68.8
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 1.3e-68 263.5 187 70.6
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 1.3e-68 263.5 210 63.3
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 2.2e-68 262.7 192 69.3
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 2.2e-68 262.7 192 67.2
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 2.2e-68 262.7 192 69.3
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 2.9e-68 262.3 191 68.6
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 2.9e-68 262.3 192 68.8
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 3.8e-68 261.9 187 70.6
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 8.5e-68 260.8 192 67.7
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 8.5e-68 260.8 192 67.2
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 1.9e-67 259.6 191 66.0
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 1.9e-67 259.6 191 68.1
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 2.5e-67 259.2 184 69.0
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 2.5e-67 259.2 184 69.0
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 2.5e-67 259.2 189 67.2
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 3.2e-67 258.8 210 63.3
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 5.5e-67 258.1 194 68.6
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 5.5e-67 258.1 189 68.3
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 5.5e-67 258.1 189 68.3
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 7.2e-67 257.7 189 68.3
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 7.2e-67 257.7 192 66.7
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 9.4e-67 257.3 187 69.5
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 1.2e-66 256.9 191 68.1
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 2.7e-66 255.8 189 67.7
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 4.7e-66 255.0 189 67.7
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.0e-65 252.3 209 61.7
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 3.0e-65 252.3 191 66.5
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 4.0e-65 251.9 191 67.0
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 1.2e-64 250.4 189 66.7
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 1.2e-64 250.4 187 68.4
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 2.0e-64 249.6 191 63.9
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 2.0e-64 249.6 189 67.7
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 2.6e-64 249.2 191 64.9
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 3.4e-64 248.8 189 66.7
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 3.4e-64 248.8 189 66.7
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 4.4e-64 248.4 198 64.1
BcaC05g30341 Brassica carinata HOM05D003926 ORTHO05D005273 5.7e-64 248.1 191 66.5
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 7.5e-64 247.7 191 64.4
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 7.5e-64 247.7 190 64.7
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 1.3e-63 246.9 191 66.0
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 1.3e-63 246.9 191 66.0
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 1.3e-63 246.9 191 66.0
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 2.2e-63 246.1 191 64.4
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 3.7e-63 245.4 206 61.7
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 3.7e-63 245.4 206 62.6
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 1.2e-61 240.4 188 64.9
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 2.0e-61 239.6 188 61.7
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 2.9e-60 235.7 196 62.8
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 5.0e-60 235.0 211 58.3
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 5.0e-60 235.0 193 60.6
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 1.5e-59 233.4 190 62.6
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 2.5e-59 232.6 209 58.4
CDE01G0304 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 2.7e-58 229.2 191 59.2
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 2.7e-58 229.2 189 59.3
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 8.3e-55 217.6 158 70.3
Psat6g077960 Pisum sativum HOM05D003926 ORTHO05D005273 1.4e-54 216.9 182 61.0
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 3.5e-53 212.2 194 57.2
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 1.0e-52 210.7 191 59.2
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.8e-50 202.6 195 55.9
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.6e-48 196.1 195 52.8
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 3.3e-43 179.1 201 49.3
Psat3g106080 Pisum sativum HOM05D003926 ORTHO05D005273 6.2e-42 174.9 131 64.9
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 1.8e-41 173.3 92 83.7
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 1.8e-41 173.3 136 61.0
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 5.2e-41 171.8 136 60.3
PGSC0003DMG401001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 2.0e-40 169.9 121 66.9
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 1.3e-36 157.1 176 53.4
Psat4g186360 Pisum sativum HOM05D003926 ORTHO05D005273 4.4e-32 142.1 92 67.4
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 1.4e-30 137.1 171 44.4
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 1.7e-28 130.2 134 53.7
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 8.6e-28 127.9 84 69.0
Dinv33869 Davidia involucrata HOM05D003926 ORTHO05D005273 7.3e-27 124.8 87 75.9
AagrBONN_evm.TU.Sc2ySwM_344.3761 Anthoceros agrestis HOM05D003926 ORTHO05D005273 4.7e-26 122.1 179 44.7
Psat5g059720 Pisum sativum HOM05D000434 ORTHO05D007220 1.2e-16 90.9 118 45.8
SHI25820 Sapria himalayana HOM05D003926 ORTHO05D005273 4.2e-14 82.4 78 59.0
Psat7g240480 Pisum sativum HOM05D000029 ORTHO05D037355 2.9e-07 59.7 37 75.7
Pp3c22_5030 Physcomitrium patens HOM05D000005 ORTHO05D000239 8.4e-07 58.2 49 46.9
Psat7g240520 Pisum sativum HOM05D000029 ORTHO05D037355 3.2e-06 56.2 32 78.1
MCO11G572 Micromonas commoda HOM05D003926 ORTHO05D005273 4.2e-06 55.8 74 36.5
MCO12G165 Micromonas commoda HOM05D002596 ORTHO05D002851 5.4e-06 55.5 61 41.0


User provided reference genes

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