Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 4.1e-302 1040.8 606 100.0
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 3.6e-250 868.2 538 97.4
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 7.7e-184 647.9 546 75.5
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 4.3e-174 615.5 540 72.4
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 3.1e-172 609.4 537 73.0
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 3.4e-171 605.9 533 71.7
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 9.2e-169 597.8 587 67.0
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 3.7e-162 575.9 546 69.2
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 1.6e-160 570.5 541 65.6
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.7e-154 550.4 542 64.8
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 2.2e-154 550.1 549 66.7
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 4.6e-152 542.3 554 65.3
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.0e-151 541.2 539 67.3
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.3e-151 540.8 543 68.0
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.3e-151 540.8 548 64.1
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 8.6e-151 538.1 533 67.5
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 1.9e-150 537.0 546 60.6
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 1.2e-149 534.3 542 67.7
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 2.1e-149 533.5 546 63.7
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 3.6e-149 532.7 586 64.8
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 1.8e-148 530.4 554 66.2
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 1.8e-148 530.4 552 67.0
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 2.4e-148 530.0 546 63.0
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 5.2e-148 528.9 562 64.1
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 9.9e-147 524.6 555 67.0
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 1.7e-146 523.9 565 63.7
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 2.2e-146 523.5 538 58.7
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 4.9e-146 522.3 554 66.2
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 1.9e-145 520.4 570 63.3
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 9.3e-145 518.1 546 65.9
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 1.6e-144 517.3 538 63.2
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.0e-143 514.6 586 61.9
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 1.7e-143 513.8 535 64.5
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 2.3e-143 513.5 521 66.6
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 1.5e-142 510.8 538 66.5
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 1.5e-142 510.8 545 64.4
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 3.3e-142 509.6 546 63.9
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 5.6e-142 508.8 540 64.1
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 1.3e-141 507.7 549 64.1
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.3e-141 507.7 593 60.2
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 6.2e-141 505.4 615 58.7
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 6.2e-141 505.4 548 63.9
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 6.2e-141 505.4 546 62.6
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.4e-140 504.2 553 64.4
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 1.4e-140 504.2 544 61.2
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 3.1e-140 503.1 544 61.0
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 3.1e-140 503.1 550 61.3
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 4.0e-140 502.7 556 59.0
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 1.2e-139 501.1 538 66.4
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 7.6e-139 498.4 537 55.9
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 1.3e-138 497.7 547 61.8
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 1.7e-138 497.3 544 61.9
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 2.2e-138 496.9 566 63.1
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 2.2e-138 496.9 566 58.3
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 3.8e-138 496.1 552 60.9
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 4.9e-138 495.7 544 60.7
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.4e-137 494.2 549 60.7
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.4e-137 494.2 559 60.8
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.2e-136 491.1 591 61.8
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 2.1e-136 490.3 542 61.6
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 4.6e-136 489.2 544 61.2
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 6.0e-136 488.8 548 57.5
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 7.9e-136 488.4 534 61.2
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 1.0e-135 488.0 549 61.9
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 1.3e-135 487.6 537 62.0
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 5.1e-135 485.7 552 60.3
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 3.3e-134 483.0 553 61.1
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 3.3e-134 483.0 550 58.7
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 1.3e-133 481.1 581 57.0
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 1.3e-133 481.1 560 59.1
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.6e-133 480.7 540 62.0
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.6e-133 480.7 553 61.1
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 2.1e-133 480.3 565 60.2
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 8.1e-133 478.4 555 59.5
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 2.4e-132 476.9 547 58.7
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 3.1e-132 476.5 559 59.9
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 4.0e-132 476.1 543 53.6
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 5.3e-132 475.7 570 59.5
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 3.4e-131 473.0 550 58.2
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 4.5e-131 472.6 539 59.6
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 5.8e-131 472.2 579 56.1
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 5.8e-131 472.2 529 62.4
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 5.8e-131 472.2 538 56.7
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 9.9e-131 471.5 548 58.9
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 2.9e-130 469.9 540 59.6
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 2.4e-129 466.8 547 60.9
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 7.1e-129 465.3 566 59.0
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 1.1e-126 458.0 550 56.4
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 5.3e-124 449.1 545 49.2
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 4.5e-123 446.0 565 58.4
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 1.3e-122 444.5 554 61.4
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 9.3e-121 438.3 550 59.3
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 2.1e-120 437.2 549 56.1
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.8e-119 434.1 507 52.5
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 1.1e-118 431.4 548 56.9
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 5.7e-118 429.1 528 49.2
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 5.7e-118 429.1 548 54.2
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 7.4e-118 428.7 540 56.3
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.6e-117 427.6 539 54.2
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.7e-117 426.4 544 53.7
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.1e-116 423.3 539 55.8
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 2.0e-115 420.6 539 56.6
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 2.1e-112 410.6 482 58.9
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 6.1e-112 409.1 553 54.6
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 6.7e-111 405.6 537 53.8
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 8.7e-111 405.2 539 57.5
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 7.4e-110 402.1 548 53.3
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 7.9e-104 382.1 346 70.2
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.5e-102 377.1 381 64.3
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 1.8e-100 370.9 599 50.3
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 7.4e-94 349.0 357 59.9
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.3e-93 348.2 564 48.8
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 8.8e-87 325.5 531 49.5
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 1.1e-84 318.5 530 47.0
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.4e-84 318.2 534 41.9
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 8.0e-80 302.4 502 45.4
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.1e-76 290.4 484 43.8
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 4.7e-72 276.6 556 36.7
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 1.6e-64 251.5 361 52.6
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 2.8e-64 250.8 164 81.1
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 7.0e-60 236.1 148 81.8
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 7.8e-59 232.6 187 68.4
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 8.0e-56 222.6 247 54.7
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 5.2e-55 219.9 125 92.8
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 1.4e-52 211.8 224 52.2
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 1.1e-49 202.2 231 49.8
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.1e-47 195.7 391 45.5
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 2.4e-44 184.5 240 50.8
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 6.2e-40 169.9 189 54.0
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 6.2e-40 169.9 189 54.0
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 2.4e-36 157.9 235 40.9
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 8.1e-32 142.9 152 56.6
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.6e-30 137.9 94 74.5
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 4.6e-27 127.1 153 54.2
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 6.0e-27 126.7 100 61.0
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.3e-20 102.8 62 83.9
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 2.7e-19 101.3 279 31.9
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 1.1e-15 89.4 77 59.7
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 3.1e-15 87.8 62 71.0
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 3.1e-15 87.8 58 79.3
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.5e-14 84.0 79 57.0
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.7e-13 82.0 85 51.8
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 2.1e-11 75.1 101 46.5
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 2.7e-11 74.7 69 58.0
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 2.7e-11 74.7 51 78.4
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 1.3e-10 72.4 44 88.6
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.5e-09 68.2 80 53.8
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 2.1e-08 65.1 37 81.1
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 3.1e-07 61.2 67 55.2
MBI03_g15603_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.5e-06 58.9 78 48.7


User provided reference genes

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