Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 5.2e-232 807.4 410 100.0
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.7e-227 792.3 410 97.8
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 4.8e-161 571.6 407 74.0
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 2.7e-156 555.8 370 75.7
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 4.8e-145 518.5 457 61.7
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.2e-143 513.8 381 69.3
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 3.2e-141 505.8 355 70.4
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 5.1e-139 498.4 337 72.4
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 9.7e-138 494.2 357 68.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.2e-134 483.0 360 68.6
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 3.8e-134 482.3 370 66.5
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 8.5e-134 481.1 384 64.1
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 4.2e-133 478.8 378 65.3
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 9.4e-133 477.6 357 66.9
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.2e-132 477.2 358 67.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.7e-132 476.1 357 66.7
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 4.7e-132 475.3 355 68.2
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 1.8e-131 473.4 355 66.8
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 3.9e-131 472.2 356 66.6
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 6.7e-131 471.5 359 66.6
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 8.8e-131 471.1 373 64.1
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.1e-130 470.7 358 65.6
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.5e-130 470.3 356 66.0
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 2.0e-130 469.9 359 66.3
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 4.4e-130 468.8 378 64.3
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 1.3e-129 467.2 357 66.9
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.7e-129 465.7 361 65.7
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 4.8e-129 465.3 357 66.4
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 4.8e-129 465.3 356 66.6
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.1e-128 464.2 357 65.8
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 2.4e-128 463.0 362 63.8
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 4.1e-128 462.2 367 64.9
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 9.1e-128 461.1 377 64.2
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.5e-127 460.3 356 66.0
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.6e-127 459.5 362 63.5
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 1.0e-126 457.6 361 65.7
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.2e-126 456.4 356 65.7
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 5.0e-126 455.3 406 60.3
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 5.0e-126 455.3 372 63.4
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.5e-125 453.0 362 63.0
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 7.2e-125 451.4 372 61.3
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.2e-124 450.7 369 62.6
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.2e-124 450.7 352 66.2
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.6e-124 450.3 362 62.4
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 4.7e-124 448.7 366 62.6
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.8e-123 446.8 371 62.8
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 8.8e-123 444.5 361 64.8
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.6e-122 443.0 369 63.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 9.7e-122 441.0 355 65.1
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 2.8e-121 439.5 380 60.8
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 8.2e-121 438.0 356 62.9
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.1e-120 437.6 356 61.5
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 2.4e-120 436.4 356 61.2
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 3.1e-120 436.0 359 61.3
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.3e-120 435.3 355 64.2
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 7.0e-120 434.9 383 60.8
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 9.1e-120 434.5 354 63.3
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 9.1e-120 434.5 361 63.2
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 1.2e-119 434.1 356 60.7
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.2e-119 434.1 357 59.9
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.6e-119 433.0 367 62.9
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 2.6e-119 433.0 363 61.2
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 3.5e-119 432.6 371 57.1
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 1.7e-118 430.3 366 57.9
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.7e-118 430.3 371 57.1
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.2e-118 429.9 371 57.4
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.2e-118 429.9 371 57.4
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 8.5e-118 427.9 357 59.1
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.1e-117 427.6 363 58.4
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.5e-117 427.2 363 57.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.5e-117 427.2 366 57.9
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 1.5e-117 427.2 366 57.9
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 5.5e-117 425.2 363 58.7
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.2e-116 424.1 365 59.2
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 3.6e-116 422.5 357 61.9
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 6.1e-116 421.8 362 59.4
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.0e-115 421.0 357 59.7
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 1.4e-115 420.6 364 59.9
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 3.0e-115 419.5 357 58.8
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 4.0e-115 419.1 363 57.9
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 6.8e-115 418.3 359 58.2
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 6.8e-115 418.3 356 58.7
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 8.8e-115 417.9 359 57.9
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 1.5e-114 417.2 358 60.1
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 2.0e-114 416.8 355 60.6
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 2.6e-114 416.4 392 54.6
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 5.7e-114 415.2 393 54.7
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 2.4e-112 409.8 362 56.9
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 4.5e-111 405.6 383 54.8
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.6e-103 380.6 353 58.4
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 5.9e-103 378.6 324 59.3
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 3.3e-101 372.9 292 66.4
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 3.3e-101 372.9 352 53.4
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 2.6e-98 363.2 354 55.9
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 2.4e-96 356.7 291 63.9
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 9.2e-96 354.8 273 66.7
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 6.2e-92 342.0 344 52.9
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 7.3e-85 318.5 355 51.3
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 8.1e-84 315.1 269 57.2
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 5.4e-80 302.4 383 43.3
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.7e-78 297.4 374 44.9
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.1e-77 294.7 373 44.0
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 5.6e-77 292.4 361 44.6
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.6e-74 283.5 359 43.5
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.9e-69 267.3 368 40.8
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.3e-46 191.4 322 35.1
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 9.0e-43 178.7 253 39.5
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 6.5e-41 172.6 313 37.1
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.5e-40 169.5 157 58.6
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 7.1e-40 169.1 157 59.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 7.4e-37 159.1 370 31.1
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 9.6e-37 158.7 184 47.8
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 5.0e-33 146.4 152 50.0
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 1.8e-22 111.3 105 47.6
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 8.2e-20 102.4 65 75.4
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 8.2e-20 102.4 65 75.4
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.0e-17 95.5 112 50.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 4.2e-16 90.1 81 60.5
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.7e-15 87.4 119 42.9
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.0e-14 85.5 264 26.5
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.1e-13 82.0 81 55.6
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 3.3e-13 80.5 69 56.5
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.9e-08 64.7 131 36.6
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.4e-06 58.5 65 53.8
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.8e-06 58.2 48 60.4


User provided reference genes

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