Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.9e-172 609.0 289 100.0
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.3e-170 602.1 289 98.6
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 4.0e-146 521.5 289 83.4
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 4.4e-137 491.5 288 78.8
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.2e-127 458.8 285 73.7
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.5e-124 449.9 289 72.0
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 2.0e-121 439.5 285 70.5
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 4.4e-121 438.3 285 68.8
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 7.8e-118 427.6 285 66.7
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.0e-117 427.2 294 68.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 4.3e-116 421.8 285 68.1
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 1.1e-114 417.2 288 65.6
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 3.1e-114 415.6 285 67.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.5e-113 413.3 281 66.5
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.5e-113 413.3 282 67.4
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.0e-113 412.9 285 66.0
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 3.4e-113 412.1 284 68.3
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 4.5e-113 411.8 281 66.5
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 9.9e-113 410.6 285 66.3
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.7e-112 409.8 271 68.3
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 2.2e-112 409.5 288 64.9
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 4.2e-111 405.2 285 66.0
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 5.4e-111 404.8 285 65.6
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.6e-110 401.7 287 65.5
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 6.0e-110 401.4 285 62.8
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.9e-110 401.0 293 64.5
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.3e-109 400.2 285 65.3
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.3e-109 400.2 285 63.2
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.1e-108 397.1 285 63.5
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-108 397.1 282 63.8
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.1e-108 397.1 266 66.2
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.6e-108 394.0 296 63.2
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 3.7e-107 392.1 291 63.6
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 3.7e-107 392.1 291 63.6
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 6.2e-107 391.3 275 65.1
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.8e-106 389.8 289 63.3
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.8e-106 389.8 290 63.4
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.8e-106 389.8 291 63.6
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.1e-106 389.0 275 65.1
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 1.2e-105 387.1 285 63.5
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.4e-105 385.6 290 62.8
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 3.4e-105 385.6 290 63.8
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.8e-105 384.8 285 62.5
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 1.2e-102 377.1 291 60.8
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.3e-101 372.9 257 65.8
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.3e-99 367.1 278 64.4
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.8e-99 365.9 277 63.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 3.7e-99 365.5 287 61.7
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 6.9e-98 361.3 234 70.1
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.5e-97 360.1 286 57.7
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 3.8e-96 355.5 241 68.0
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.8e-96 355.5 285 60.0
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 6.5e-96 354.8 289 60.2
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 7.1e-95 351.3 233 66.5
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 9.7e-92 340.9 276 56.9
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 3.4e-89 332.4 278 56.1
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.7e-88 330.1 266 59.4
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 7.2e-87 324.7 281 52.0
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 5.7e-84 315.1 221 64.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.7e-84 314.3 316 52.5
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.7e-83 313.5 243 60.5
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.1e-76 290.8 282 46.8
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 3.3e-76 289.3 216 62.5
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 4.8e-75 285.4 223 61.0
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 9.1e-74 281.2 288 54.2
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.5e-73 280.4 284 50.4
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 4.1e-66 255.8 291 42.3
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.6e-65 253.8 369 40.7
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 2.7e-62 243.0 182 59.3
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 3.6e-62 242.7 271 41.0
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 8.0e-62 241.5 273 40.7
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 3.0e-61 239.6 225 52.0
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.1e-58 231.1 211 51.2
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 1.4e-53 214.2 228 50.0
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 4.7e-38 162.5 135 59.3
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 2.3e-37 160.2 105 70.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.5e-36 157.5 115 63.5
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 6.4e-35 152.1 181 48.1
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 8.0e-30 135.2 368 26.9
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.7e-24 117.5 66 77.3
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 4.1e-18 96.3 66 69.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.2e-09 68.2 45 66.7
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.3e-08 64.7 43 60.5
TAR628G1214 Trochodendron aralioides HOM05D007847 ORTHO05D414451 1.3e-06 58.2 38 63.2
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 1.3e-06 58.2 57 47.4


User provided reference genes

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