Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008826 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.6e-89 332.0 168 100.0
CSS0024955 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.3e-69 266.5 181 80.1
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 4.7e-30 135.2 111 65.8
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 6.1e-30 134.8 364 32.7
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.4e-29 133.7 166 52.4
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.8e-29 133.3 170 50.6
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.8e-29 133.3 170 50.6
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.8e-29 133.3 127 61.4
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.8e-29 133.3 127 61.4
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.8e-29 133.3 127 61.4
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.8e-29 133.3 188 47.3
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 2.3e-29 132.9 165 53.3
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 4.0e-29 132.1 166 51.2
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 4.0e-29 132.1 121 62.8
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 5.2e-29 131.7 123 61.0
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 6.8e-29 131.3 164 53.7
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 8.8e-29 131.0 162 52.5
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 2.0e-28 129.8 121 61.2
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 2.0e-28 129.8 162 52.5
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 2.0e-28 129.8 121 61.2
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 2.6e-28 129.4 162 52.5
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 2.6e-28 129.4 164 51.8
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 2.6e-28 129.4 122 60.7
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 3.4e-28 129.0 151 53.6
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 3.4e-28 129.0 171 49.7
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 4.4e-28 128.6 162 52.5
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 5.7e-28 128.3 164 53.0
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 5.7e-28 128.3 121 60.3
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 7.5e-28 127.9 164 51.2
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 7.5e-28 127.9 164 51.2
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 9.8e-28 127.5 121 59.5
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 1.3e-27 127.1 121 60.3
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 2.2e-27 126.3 155 50.3
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 2.2e-27 126.3 162 50.6
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 2.8e-27 125.9 151 52.3
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 4.8e-27 125.2 121 57.9
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 4.8e-27 125.2 121 58.7
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 6.3e-27 124.8 121 58.7
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 8.3e-27 124.4 121 57.9
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 8.3e-27 124.4 121 57.9
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 1.4e-26 123.6 179 46.4
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 1.4e-26 123.6 144 54.2
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 1.8e-26 123.2 164 49.4
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 1.8e-26 123.2 164 49.4
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.8e-26 123.2 162 49.4
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 2.4e-26 122.9 162 48.8
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 3.1e-26 122.5 165 48.5
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 4.1e-26 122.1 162 50.0
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 4.1e-26 122.1 121 57.0
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 5.4e-26 121.7 188 45.7
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 7.0e-26 121.3 138 55.1
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 7.0e-26 121.3 165 49.7
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 7.0e-26 121.3 165 49.7
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 9.1e-26 120.9 116 60.3
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.2e-25 120.6 126 56.3
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 1.6e-25 120.2 121 57.0
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 2.7e-25 119.4 183 45.9
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 2.7e-25 119.4 111 61.3
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 3.5e-25 119.0 124 58.1
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 7.7e-25 117.9 128 53.9
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 1.0e-24 117.5 157 47.8
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.3e-24 117.1 157 49.0
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 1.7e-24 116.7 128 53.1
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 1.7e-24 116.7 128 53.1
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 1.7e-24 116.7 157 48.4
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 2.2e-24 116.3 128 53.1
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 2.2e-24 116.3 168 48.8
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.2e-24 116.3 155 48.4
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 2.9e-24 115.9 144 50.7
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 3.8e-24 115.5 128 52.3
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 3.8e-24 115.5 129 54.3
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 5.0e-24 115.2 121 53.7
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 5.0e-24 115.2 128 52.3
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 5.0e-24 115.2 121 53.7
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 5.0e-24 115.2 153 48.4
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 6.5e-24 114.8 155 47.1
BcaB03g12090 Brassica carinata HOM05D002984 ORTHO05D003561 6.5e-24 114.8 128 52.3
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 6.5e-24 114.8 121 53.7
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 6.5e-24 114.8 121 53.7
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 6.5e-24 114.8 121 53.7
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 6.5e-24 114.8 121 53.7
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 8.5e-24 114.4 156 46.8
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 8.5e-24 114.4 153 48.4
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 1.1e-23 114.0 163 47.9
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 1.1e-23 114.0 156 46.2
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 1.9e-23 113.2 134 51.5
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.5e-23 112.8 160 46.9
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 2.5e-23 112.8 160 46.9
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 4.2e-23 112.1 159 45.9
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 7.2e-23 111.3 156 46.8
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 1.2e-22 110.5 162 45.7
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 2.1e-22 109.8 158 46.8
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 2.7e-22 109.4 162 47.5
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 2.7e-22 109.4 140 50.7
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 4.7e-22 108.6 112 55.4
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 4.7e-22 108.6 124 51.6
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 8.0e-22 107.8 154 44.8
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 5.2e-21 105.1 123 49.6
Psat7g129560 Pisum sativum HOM05D002984 ORTHO05D003561 1.5e-20 103.6 152 44.1
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 3.4e-20 102.4 149 44.3
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 4.4e-20 102.1 107 52.3
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 5.7e-20 101.7 151 42.4
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 5.7e-20 101.7 123 49.6
Dinv04490 Davidia involucrata HOM05D002984 ORTHO05D003561 7.5e-20 101.3 101 58.4
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 9.8e-20 100.9 164 42.1
SGA_v2.0_scaffold14G06838 Striga asiatica HOM05D002984 ORTHO05D003561 1.3e-19 100.5 183 38.8
Medtr5g054690 Medicago truncatula HOM05D002984 ORTHO05D003561 1.4e-18 97.1 127 46.5
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 1.2e-17 94.0 118 46.6
Lj2g0014050 Lotus japonicus HOM05D002984 ORTHO05D003561 4.5e-17 92.0 121 44.6
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.3e-16 89.7 54 88.9
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 5.0e-16 88.6 138 41.3
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 6.6e-16 88.2 118 44.1
FAN13G3281 Fragaria x ananassa HOM05D002984 ORTHO05D003561 8.6e-16 87.8 149 42.3
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 1.5e-15 87.0 106 51.9
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 1.9e-15 86.7 127 42.5
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-15 86.7 127 42.5
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.5e-15 86.3 122 49.2
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 2.5e-15 86.3 103 51.5
FvH4_5g01900 Fragaria vesca HOM05D002984 ORTHO05D003561 3.3e-15 85.9 162 42.0
Nitab4.5_0000672g0090 Nicotiana tabacum HOM05D002984 ORTHO05D003561 3.3e-15 85.9 148 40.5
Zm00001eb115900 Zea mays HOM05D000554 ORTHO05D000860 4.3e-15 85.5 174 35.1
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.2e-14 84.0 181 34.8
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 4.7e-14 82.0 85 58.8
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 6.1e-14 81.6 148 42.6
HanXRQChr17g0552251 Helianthus annuus HOM05D002984 ORTHO05D003561 1.0e-13 80.9 119 42.0
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 5.2e-13 78.6 103 46.6
FAN25G0819 Fragaria x ananassa HOM05D002984 ORTHO05D009683 8.9e-13 77.8 59 67.8
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 2.0e-12 76.6 93 53.8
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 2.6e-12 76.3 134 38.1
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.3e-11 73.9 146 36.3
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.2e-11 73.2 108 42.6
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 3.7e-11 72.4 82 52.4
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 4.9e-11 72.0 114 43.9
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 1.4e-10 70.5 49 67.3
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 1.4e-10 70.5 73 54.8
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 1.8e-10 70.1 111 39.6
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 2.4e-10 69.7 124 39.5
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 3.2e-10 69.3 150 36.0
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 4.1e-10 68.9 71 50.7
VMungo0464G0516 Vigna mungo HOM05D002984 ORTHO05D003561 5.4e-10 68.6 80 46.2
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 1.6e-09 67.0 74 54.1
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 1.6e-09 67.0 80 48.8
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 3.5e-09 65.9 102 40.2
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 3.9e-08 62.4 125 38.4
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 5.0e-08 62.0 58 62.1
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 8.6e-08 61.2 74 52.7
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 8.6e-08 61.2 159 32.1
Dinv40427 Davidia involucrata HOM05D002984 ORTHO05D003561 1.1e-07 60.8 89 34.8
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.1e-07 60.8 74 54.1
Medtr7g077950 Medicago truncatula HOM05D002984 ORTHO05D003561 5.6e-07 58.5 151 33.8
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 7.3e-07 58.2 124 33.1
MBI15_g33904_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 1.2e-06 57.4 28 92.9
RcHm_v2.0_Chr7g0240991 Rosa chinensis HOM05D002984 ORTHO05D003561 6.2e-06 55.1 31 80.6
SEGI_39906 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.0e-06 54.7 79 41.8


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