Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008752 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 3.2e-72 275.0 142 100.0
CSS0031331 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 1.8e-22 109.8 59 93.2
CSS0011129 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 5.7e-21 104.8 59 83.1
CSS0041187 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 1.3e-20 103.6 59 83.1
Actinidia12697 Actinidia chinensis HOM05D000524 ORTHO05D000381 2.2e-20 102.8 59 81.4
Actinidia33453 Actinidia chinensis HOM05D000524 ORTHO05D000381 3.7e-20 102.1 59 81.4
TAR375G1125 Trochodendron aralioides HOM05D000524 ORTHO05D000381 8.3e-20 100.9 59 81.4
Hma1.2p1_0532F.1_g173450 Hydrangea macrophylla HOM05D000524 ORTHO05D000381 3.1e-19 99.0 59 78.0
Migut.N01581 Erythranthe guttata HOM05D000524 ORTHO05D000381 9.1e-19 97.4 59 78.0
Migut.N01584 Erythranthe guttata HOM05D000524 ORTHO05D000381 9.1e-19 97.4 59 78.0
Lj7C525G14 Lonicera japonica HOM05D000524 ORTHO05D000381 9.1e-19 97.4 59 78.0
Ciclev10019763m.g Citrus clementina HOM05D000524 ORTHO05D000381 1.2e-18 97.1 59 78.0
Atru.chr5.357 Acer truncatum HOM05D000524 ORTHO05D000381 1.6e-18 96.7 59 78.0
Manes.05G043200 Manihot esculenta HOM05D000524 ORTHO05D000381 2.0e-18 96.3 59 78.0
Oeu026238.1 Olea europaea HOM05D000524 ORTHO05D000381 2.0e-18 96.3 59 79.7
MD02G1198800 Malus domestica HOM05D000524 ORTHO05D000381 2.7e-18 95.9 59 74.6
TAR374G0207 Trochodendron aralioides HOM05D000524 ORTHO05D000381 2.7e-18 95.9 59 79.7
SGA_v2.0_scaffold43G16462 Striga asiatica HOM05D000524 ORTHO05D000381 3.5e-18 95.5 59 78.0
Dinv32399 Davidia involucrata HOM05D000524 ORTHO05D000381 5.9e-18 94.7 59 76.3
DCAR_006884 Daucus carota HOM05D000524 ORTHO05D000381 7.7e-18 94.4 59 76.3
Migut.B01660 Erythranthe guttata HOM05D000524 ORTHO05D000381 7.7e-18 94.4 59 76.3
Rhsim01G0160900 Rhododendron simsii HOM05D000524 ORTHO05D000381 7.7e-18 94.4 59 78.0
Oeu059208.1 Olea europaea HOM05D000524 ORTHO05D000381 1.0e-17 94.0 73 68.5
CANSAT56G0399 Cannabis sativa HOM05D000524 ORTHO05D000381 1.3e-17 93.6 59 74.6
Nitab4.5_0001702g0220 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.3e-17 93.6 59 69.5
vmacro20992 Vaccinium macrocarpon HOM05D000524 ORTHO05D000381 1.3e-17 93.6 59 76.3
MSTRG.20771 Avicennia marina HOM05D000524 ORTHO05D000381 1.7e-17 93.2 59 69.5
FAN01G1690 Fragaria x ananassa HOM05D000524 ORTHO05D000381 1.7e-17 93.2 59 72.9
FAN03G1734 Fragaria x ananassa HOM05D000524 ORTHO05D000381 1.7e-17 93.2 59 72.9
Lalb_Chr07g0189551 Lupinus albus HOM05D000524 ORTHO05D000381 1.7e-17 93.2 59 72.9
Medtr8g035590 Medicago truncatula HOM05D000524 ORTHO05D000381 2.3e-17 92.8 59 76.3
PSO782G3898 Papaver somniferum HOM05D000524 ORTHO05D000381 2.3e-17 92.8 59 74.6
CiPaw.02G165300 Carya illinoinensis HOM05D000524 ORTHO05D000381 2.9e-17 92.4 59 76.3
QL08p051581 Quercus lobata HOM05D000524 ORTHO05D000381 2.9e-17 92.4 59 74.6
FvH4_7g12480 Fragaria vesca HOM05D000524 ORTHO05D000381 3.8e-17 92.0 59 71.2
FAN06G1673 Fragaria x ananassa HOM05D000524 ORTHO05D000381 3.8e-17 92.0 59 71.2
CiPaw.01G259600 Carya illinoinensis HOM05D000524 ORTHO05D000381 5.0e-17 91.7 59 74.6
Nitab4.5_0006009g0010 Nicotiana tabacum HOM05D000524 ORTHO05D000381 5.0e-17 91.7 59 67.8
TWI23G0338 Tripterygium wilfordii HOM05D000524 ORTHO05D000381 5.0e-17 91.7 59 74.6
GSVIVG01027563001 Vitis vinifera HOM05D000524 ORTHO05D000381 5.0e-17 91.7 59 72.9
Peaxi162Scf00008g01717 Petunia axillaris HOM05D000524 ORTHO05D000381 6.5e-17 91.3 59 67.8
RcHm_v2.0_Chr1g0351321 Rosa chinensis HOM05D000524 ORTHO05D000381 6.5e-17 91.3 59 69.5
SGA_v2.0_scaffold153G37045 Striga asiatica HOM05D000524 ORTHO05D000381 6.5e-17 91.3 59 72.9
Ca_07840_v3 Cicer arietinum L. HOM05D000524 ORTHO05D000381 8.6e-17 90.9 59 72.9
PGSC0003DMG400013676 Solanum tuberosum HOM05D000524 ORTHO05D000381 8.6e-17 90.9 59 69.5
PGR031G3659 Punica granatum HOM05D000524 ORTHO05D000381 1.1e-16 90.5 59 74.6
Cfa001832 Carpinus fangiana HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 72.9
Nitab4.5_0002436g0060 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 69.5
Nitab4.5_0005340g0040 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 69.5
Sc02g0002390 Simmondsia chinensis HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 69.5
Solyc10g017590.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 67.8
Sopen10g006510 Solanum pennellii HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 67.8
TPR.G37853 Trifolium pratense HOM05D000524 ORTHO05D000381 1.5e-16 90.1 59 74.6
Cpa.g.sc18.154 Carica papaya HOM05D000524 ORTHO05D000381 1.9e-16 89.7 59 69.5
ECA234G0201 Erigeron canadensis HOM05D000524 ORTHO05D000381 1.9e-16 89.7 59 72.9
Nitab4.5_0000386g0230 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.9e-16 89.7 58 69.0
Phvul.008G074100 Phaseolus vulgaris HOM05D000524 ORTHO05D000381 1.9e-16 89.7 59 72.9
Prupe.2G149400 Prunus persica HOM05D000524 ORTHO05D000381 1.9e-16 89.7 59 69.5
CAN.G910.2 Capsicum annuum HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 66.1
Ca_23820_v3 Cicer arietinum L. HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 71.2
Duzib133G0787 Durio zibethinus HOM05D000524 ORTHO05D000381 2.5e-16 89.4 63 68.3
Glyma.03G020800 Glycine max HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 72.9
Nn1g01152 Nelumbo nucifera HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 71.2
Peaxi162Scf00988g00321 Petunia axillaris HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 69.5
Solyc05g047710.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 2.5e-16 89.4 59 67.8
HanXRQChr17g0557101 Helianthus annuus HOM05D000524 ORTHO05D000381 3.3e-16 89.0 59 71.2
Cc02_g36370 Coffea canephora HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 69.5
HanXRQChr16g0523451 Helianthus annuus HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 71.2
Lj3g0026342 Lotus japonicus HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 71.2
Medtr7g075790 Medicago truncatula HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 71.2
PGR042G2092 Punica granatum HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 72.9
PGSC0003DMG400010278 Solanum tuberosum HOM05D000524 ORTHO05D000381 4.2e-16 88.6 59 66.1
ATR0661G484 Amborella trichopoda HOM05D000524 ORTHO05D000381 5.5e-16 88.2 59 72.9
Eucgr.D02433 Eucalyptus grandis HOM05D000524 ORTHO05D000381 5.5e-16 88.2 59 72.9
Gohir.D11G087100 Gossypium hirsutum HOM05D000524 ORTHO05D000381 5.5e-16 88.2 63 65.1
Gorai.007G093000 Gossypium raimondii HOM05D000524 ORTHO05D000381 5.5e-16 88.2 63 65.1
Lalb_Chr01g0021251 Lupinus albus HOM05D000524 ORTHO05D000381 7.2e-16 87.8 59 71.2
Sopen05g027960 Solanum pennellii HOM05D000524 ORTHO05D000381 7.2e-16 87.8 59 67.8
unitig_8.g3391 Utricularia gibba HOM05D000524 ORTHO05D000381 7.2e-16 87.8 59 71.2
Aqoxy7G00523 Aquilegia oxysepala HOM05D000524 ORTHO05D000381 9.5e-16 87.4 60 70.0
TWI59G1172 Tripterygium wilfordii HOM05D000524 ORTHO05D000381 9.5e-16 87.4 59 69.5
unitig_749.g14364 Utricularia gibba HOM05D000524 ORTHO05D000381 9.5e-16 87.4 59 71.2
Gohir.A08G033300 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
Gohir.D08G044000 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
Gorai.004G042700 Gossypium raimondii HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
Lj1g0003269 Lotus japonicus HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
PSO478G1135 Papaver somniferum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
PSO782G5300 Papaver somniferum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
Psat0ss4236g0200 Pisum sativum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 69.5
Psat4g150200 Pisum sativum HOM05D000524 ORTHO05D000381 1.2e-15 87.0 59 71.2
VMungo1383G1999 Vigna mungo HOM05D000524 ORTHO05D000381 1.2e-15 87.0 58 74.1
COL.COLO4_12588 Corchorus olitorius HOM05D000524 ORTHO05D000381 1.6e-15 86.7 63 63.5
Gorai.008G115000 Gossypium raimondii HOM05D000524 ORTHO05D000381 1.6e-15 86.7 63 66.7
arahy.Tifrunner.gnm1.ann1.68WCMC Arachis hypogaea HOM05D000524 ORTHO05D000381 2.1e-15 86.3 59 67.8
arahy.Tifrunner.gnm1.ann1.Z84XTW Arachis hypogaea HOM05D000524 ORTHO05D000381 2.1e-15 86.3 59 67.8
Duzib138G0869 Durio zibethinus HOM05D000524 ORTHO05D000381 2.1e-15 86.3 63 65.1
Gohir.A11G083000 Gossypium hirsutum HOM05D000524 ORTHO05D000381 2.1e-15 86.3 63 63.5
Gohir.D12G105700 Gossypium hirsutum HOM05D000524 ORTHO05D000381 2.1e-15 86.3 63 66.7
Potri.014G072800 Populus trichocarpa HOM05D000524 ORTHO05D000381 2.1e-15 86.3 59 71.2
Lsat_1_v5_gn_3_135441 Lactuca sativa HOM05D000524 ORTHO05D000381 2.8e-15 85.9 59 67.8
Phvul.010G086200 Phaseolus vulgaris HOM05D000524 ORTHO05D000381 2.8e-15 85.9 59 67.8
SalBow5G2307 Salvia bowleyana HOM05D000524 ORTHO05D000381 2.8e-15 85.9 59 71.2
Hund16978 Selenicereus undatus HOM05D000524 ORTHO05D000381 2.8e-15 85.9 60 66.7
Thecc.01G372800 Theobroma cacao HOM05D000524 ORTHO05D000381 2.8e-15 85.9 63 63.5
TPR.G30884 Trifolium pratense HOM05D000524 ORTHO05D000381 2.8e-15 85.9 59 69.5
EL10Ac1g00919 Beta vulgaris HOM05D000524 ORTHO05D000381 3.6e-15 85.5 59 64.4
ECA240G0665 Erigeron canadensis HOM05D000524 ORTHO05D000381 3.6e-15 85.5 59 66.1
SalBow7G2428 Salvia bowleyana HOM05D000524 ORTHO05D000381 3.6e-15 85.5 59 71.2
AUR62004254 Chenopodium quinoa HOM05D000524 ORTHO05D000381 8.0e-15 84.3 59 66.1
AUR62042744 Chenopodium quinoa HOM05D000524 ORTHO05D000381 8.0e-15 84.3 59 66.1
Lsat_1_v5_gn_4_37541 Lactuca sativa HOM05D000524 ORTHO05D000381 8.0e-15 84.3 59 69.5
Manes.01G264400 Manihot esculenta HOM05D000524 ORTHO05D000381 8.0e-15 84.3 59 66.1
Ah.05g175480 Amaranthus hybridus HOM05D000524 ORTHO05D000381 1.0e-14 84.0 59 66.1
CAN.G1561.14 Capsicum annuum HOM05D000524 ORTHO05D000381 1.0e-14 84.0 59 64.4
CDE12G0501 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 1.0e-14 84.0 59 69.5
Glyma.18G224000 Glycine max HOM05D000524 ORTHO05D000381 1.0e-14 84.0 59 67.8
Sed0014593 Sechium edule HOM05D000524 ORTHO05D000381 1.0e-14 84.0 59 67.8
HPP92_022483 Vanilla planifolia HOM05D000524 ORTHO05D000381 1.0e-14 84.0 60 68.3
Duzib268G0215 Durio zibethinus HOM05D000524 ORTHO05D000381 1.4e-14 83.6 63 63.5
CDE04G3181 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 2.3e-14 82.8 59 69.5
Gohir.A12G102500 Gossypium hirsutum HOM05D000524 ORTHO05D000381 2.3e-14 82.8 56 69.6
MELO3C022511.2 Cucumis melo HOM05D000524 ORTHO05D000381 3.0e-14 82.4 59 66.1
Solyc01g094030.3 Solanum lycopersicum HOM05D000524 ORTHO05D000381 3.0e-14 82.4 60 65.0
Sopen01g037850 Solanum pennellii HOM05D000524 ORTHO05D000381 3.0e-14 82.4 60 65.0
VMungo0331G0034 Vigna mungo HOM05D000524 ORTHO05D000381 3.0e-14 82.4 59 64.4
Nn6g34345 Nelumbo nucifera HOM05D000524 ORTHO05D000381 4.0e-14 82.0 59 69.5
unitig_26.g9315 Utricularia gibba HOM05D000524 ORTHO05D000381 4.0e-14 82.0 59 67.8
HPP92_014622 Vanilla planifolia HOM05D000524 ORTHO05D000381 4.0e-14 82.0 60 66.7
arahy.Tifrunner.gnm1.ann1.I40MZ1 Arachis hypogaea HOM05D000524 ORTHO05D000381 5.2e-14 81.6 59 71.2
arahy.Tifrunner.gnm1.ann1.VW6V95 Arachis hypogaea HOM05D000524 ORTHO05D000381 5.2e-14 81.6 59 71.2
Glyma.09G266600 Glycine max HOM05D000524 ORTHO05D000381 5.2e-14 81.6 59 64.4
Sabra14G0052000 Salix brachista HOM05D000524 ORTHO05D000381 5.2e-14 81.6 59 67.8
Sed0019006 Sechium edule HOM05D000524 ORTHO05D000381 5.2e-14 81.6 56 67.9
Eucgr.E01350 Eucalyptus grandis HOM05D000524 ORTHO05D000381 6.8e-14 81.3 59 67.8
HPP92_014621 Vanilla planifolia HOM05D000524 ORTHO05D000381 6.8e-14 81.3 60 66.7
Potri.002G150700 Populus trichocarpa HOM05D000524 ORTHO05D000381 8.9e-14 80.9 59 67.8
ClCG06G000270 Citrullus lanatus HOM05D000524 ORTHO05D000381 1.5e-13 80.1 56 67.9
Sabra02G0119100 Salix brachista HOM05D000524 ORTHO05D000381 1.5e-13 80.1 59 64.4
CsaV3_6G006060 Cucumis sativus L. HOM05D000524 ORTHO05D000381 2.0e-13 79.7 59 64.4
HanXRQChr13g0425551 Helianthus annuus HOM05D000524 ORTHO05D000381 4.4e-13 78.6 59 62.7
Aa31LG1G27070 Aethionema arabicum HOM05D000524 ORTHO05D000381 5.7e-13 78.2 59 64.4
MSTRG.28196 Avicennia marina HOM05D000524 ORTHO05D000381 7.5e-13 77.8 59 62.7
THA.LOC104827619 Tarenaya hassleriana HOM05D000524 ORTHO05D000381 9.8e-13 77.4 59 62.7
Aa31LG10G15150 Aethionema arabicum HOM05D000524 ORTHO05D000381 1.3e-12 77.0 59 62.7
CARHR171360 Cardamine hirsuta HOM05D000524 ORTHO05D000381 1.3e-12 77.0 59 62.7
Thhalv10005905m.g Eutrema salsugineum HOM05D000524 ORTHO05D000381 1.7e-12 76.6 59 62.7
AL5G43260 Arabidopsis lyrata HOM05D000524 ORTHO05D000381 2.2e-12 76.3 59 62.7
AT3G61050 Arabidopsis thaliana HOM05D000524 ORTHO05D000381 2.2e-12 76.3 59 62.7
A04p01300 Brassica napus HOM05D000524 ORTHO05D000381 2.2e-12 76.3 59 62.7
BraA04t15849Z Brassica rapa HOM05D000524 ORTHO05D000381 2.2e-12 76.3 59 62.7
SEGI_00828 Sequoiadendron giganteum HOM05D000524 ORTHO05D000381 2.2e-12 76.3 56 64.3
C04p31650 Brassica napus HOM05D000524 ORTHO05D000381 3.7e-12 75.5 59 62.7
BolC4t24712H Brassica oleracea HOM05D000524 ORTHO05D000381 3.7e-12 75.5 59 62.7
BcaB02g07392 Brassica carinata HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
BcaC02g10201 Brassica carinata HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
BcaC08g45096 Brassica carinata HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
A07p25280 Brassica napus HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
C06p27040 Brassica napus HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
BolC6t37876H Brassica oleracea HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
BraA07t30170Z Brassica rapa HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
Sp5g02310 Schrenkiella parvula HOM05D000524 ORTHO05D000381 6.3e-12 74.7 59 61.0
Carub.0005s2770 Capsella rubella HOM05D000524 ORTHO05D000381 1.1e-11 73.9 59 61.0
CDE04G2257 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 1.1e-11 73.9 59 59.3
THA.LOC104802000 Tarenaya hassleriana HOM05D000524 ORTHO05D000381 2.4e-11 72.8 59 55.9
Glyma.04G165151 Glycine max HOM05D000524 ORTHO05D000381 3.1e-11 72.4 49 71.4
Os03g0251600 Oryza sativa ssp. japonica HOM05D000524 ORTHO05D000381 3.5e-10 68.9 57 63.2
Zm00001eb010800 Zea mays HOM05D000524 ORTHO05D000381 3.5e-10 68.9 57 63.2
SHI13498 Sapria himalayana HOM05D000524 ORTHO05D000381 4.5e-10 68.6 59 52.5
Haze_16725 Corylus avellana HOM05D000524 ORTHO05D000381 7.8e-10 67.8 48 70.8
PSO782G4406 Papaver somniferum HOM05D000524 ORTHO05D000381 2.3e-09 66.2 51 58.8
Pp3c24_10990 Physcomitrium patens HOM05D000524 ORTHO05D000381 5.6e-08 61.6 59 50.8
Glyma.07G082700 Glycine max HOM05D000524 ORTHO05D000381 1.6e-07 60.1 59 52.5
Lalb_Chr13g0291631 Lupinus albus HOM05D000524 ORTHO05D000381 2.8e-07 59.3 59 50.8
Pp3c8_11720 Physcomitrium patens HOM05D000524 ORTHO05D000381 3.6e-07 58.9 56 51.8
Os07g0409100 Oryza sativa ssp. japonica HOM05D000524 ORTHO05D000381 4.7e-07 58.5 60 50.0
SMO143G0196 Selaginella moellendorffii HOM05D000524 ORTHO05D000381 6.1e-07 58.2 60 51.7
Zm00001eb305750 Zea mays HOM05D000524 ORTHO05D000381 8.0e-07 57.8 60 51.7
Mapoly0022s0057 Marchantia polymorpha HOM05D000524 ORTHO05D000381 1.4e-06 57.0 59 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1047 Anthoceros agrestis HOM05D000524 ORTHO05D000381 2.3e-06 56.2 59 52.5


User provided reference genes

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