Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 9.6e-161 570.1 282 100.0
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.5e-102 376.7 192 95.3
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 3.0e-98 362.5 192 90.1
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.7e-88 330.1 192 83.9
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 2.5e-84 316.2 193 77.7
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 2.2e-80 303.1 192 76.6
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 3.1e-79 299.3 204 69.6
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 3.5e-78 295.8 186 74.2
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 4.2e-76 288.9 194 69.1
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 1.0e-74 284.3 188 72.3
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 3.0e-74 282.7 192 68.8
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.8e-74 281.6 183 77.6
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 1.2e-73 280.8 198 68.2
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 2.6e-73 279.6 199 66.8
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 3.4e-73 279.3 198 66.7
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 4.4e-73 278.9 191 67.5
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 5.7e-73 278.5 191 68.6
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.7e-72 276.9 184 70.1
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 3.7e-72 275.8 191 68.6
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 6.4e-72 275.0 185 70.3
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 8.3e-72 274.6 187 69.0
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 1.4e-71 273.9 195 66.2
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 1.4e-71 273.9 185 71.4
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 7.0e-71 271.6 191 66.5
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 9.2e-71 271.2 189 68.3
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 1.2e-70 270.8 191 64.9
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 7.8e-70 268.1 191 68.1
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 7.8e-70 268.1 191 68.1
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 7.8e-70 268.1 191 68.1
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 7.8e-70 268.1 187 67.4
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 1.7e-69 266.9 191 67.5
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 2.9e-69 266.2 191 67.5
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 3.9e-69 265.8 192 66.7
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 3.9e-69 265.8 188 63.3
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 1.1e-68 264.2 192 68.2
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 1.9e-68 263.5 184 67.9
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 3.3e-68 262.7 195 62.1
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 5.6e-68 261.9 195 63.6
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 7.3e-68 261.5 192 65.1
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 1.2e-67 260.8 183 63.9
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 1.6e-67 260.4 183 66.1
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 3.6e-67 259.2 191 66.0
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 3.6e-67 259.2 183 66.1
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 2.3e-66 256.5 182 64.3
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 1.5e-65 253.8 182 64.3
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 3.4e-65 252.7 188 66.0
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 3.4e-65 252.7 192 66.7
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 4.4e-65 252.3 189 63.5
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 7.5e-65 251.5 191 64.4
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 7.5e-65 251.5 191 63.4
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 9.8e-65 251.1 189 63.5
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.7e-64 250.4 194 64.4
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 8.3e-64 248.1 185 64.9
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.1e-63 247.7 185 64.3
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.1e-63 247.7 194 63.4
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 1.9e-63 246.9 189 65.1
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.4e-63 246.5 194 63.9
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.4e-63 246.5 194 63.9
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 3.2e-63 246.1 188 62.2
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 3.2e-63 246.1 184 62.5
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 4.1e-63 245.7 191 62.8
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 7.0e-63 245.0 184 64.1
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 9.2e-63 244.6 188 63.8
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 2.7e-62 243.0 184 60.9
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 6.0e-62 241.9 186 63.4
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 7.8e-62 241.5 186 62.4
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.0e-61 241.1 187 64.2
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 1.0e-61 241.1 200 60.0
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 1.5e-60 237.3 249 50.2
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 2.5e-60 236.5 192 59.4
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 2.5e-60 236.5 192 57.8
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 7.3e-60 235.0 201 58.7
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 1.2e-59 234.2 190 57.4
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 1.1e-58 231.1 185 61.1
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 1.8e-58 230.3 205 55.1
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 2.6e-57 226.5 184 59.8
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 1.9e-55 220.3 190 56.3
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 3.2e-55 219.5 182 58.2
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 9.2e-55 218.0 188 55.3
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 1.2e-54 217.6 184 57.6
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 1.2e-54 217.6 182 57.7
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 1.6e-54 217.2 181 58.6
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 1.6e-54 217.2 184 57.6
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 1.6e-54 217.2 184 56.5
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 1.6e-54 217.2 195 57.4
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 3.5e-54 216.1 184 56.0
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 4.6e-54 215.7 184 55.4
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 1.3e-53 214.2 181 56.4
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 1.3e-53 214.2 184 57.1
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 1.7e-53 213.8 184 57.1
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 2.3e-53 213.4 195 54.9
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 3.3e-52 209.5 181 57.5
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 3.6e-51 206.1 142 69.7
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 1.1e-50 204.5 215 47.0
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 5.2e-50 202.2 191 52.9
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 1.5e-49 200.7 184 54.3
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 2.0e-49 200.3 181 56.4
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 2.6e-49 199.9 205 48.8
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 4.4e-49 199.1 205 48.8
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 4.9e-48 195.7 181 53.6
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 4.9e-48 195.7 181 53.0
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 2.4e-47 193.4 192 56.2
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 1.9e-44 183.7 210 45.7
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 1.9e-44 183.7 178 52.2
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 2.0e-41 173.7 228 41.2
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 5.8e-41 172.2 188 43.6
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 9.9e-41 171.4 194 45.4
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.2e-40 170.2 185 47.6
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 3.8e-40 169.5 193 53.4
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 4.9e-40 169.1 192 47.4
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 6.4e-40 168.7 193 53.4
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 8.4e-40 168.3 214 40.7
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 8.4e-40 168.3 218 42.2
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.1e-39 167.9 221 40.7
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.6e-38 164.1 217 42.4
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 6.0e-38 162.2 192 42.7
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 3.0e-37 159.8 233 36.1
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 3.9e-37 159.5 187 42.2
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.1e-36 157.9 212 42.0
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 2.5e-36 156.8 220 39.5
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 2.5e-36 156.8 191 41.4
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 5.6e-36 155.6 188 42.6
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 9.6e-36 154.8 220 40.0
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 1.3e-35 154.5 216 39.4
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 4.8e-35 152.5 181 44.8
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 6.9e-34 148.7 192 42.2
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 1.2e-33 147.9 189 41.8
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.5e-33 147.5 224 37.5
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 9.9e-33 144.8 189 40.7
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 1.3e-32 144.4 195 38.5
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 8.4e-32 141.7 139 50.4
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 2.1e-30 137.1 134 50.0
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 2.1e-30 137.1 151 46.4
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 6.0e-30 135.6 154 45.5
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 6.6e-29 132.1 134 51.5
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 8.7e-29 131.7 217 35.9
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 2.5e-28 130.2 186 39.8
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 4.3e-28 129.4 134 50.0
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 7.4e-28 128.6 133 46.6
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 7.4e-28 128.6 133 46.6
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 9.6e-28 128.3 187 38.0
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 2.8e-27 126.7 207 36.2
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 3.6e-27 126.3 112 53.6
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 6.2e-27 125.6 212 34.9
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 1.1e-26 124.8 132 49.2
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 1.4e-26 124.4 176 39.8
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 1.2e-25 121.3 141 47.5
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 1.3e-24 117.9 132 47.0
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 5.5e-23 112.5 142 42.3
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 7.9e-22 108.6 140 41.4
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 1.3e-21 107.8 140 39.3
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 8.7e-21 105.1 94 55.3
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 6.2e-19 99.0 103 47.6
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 6.2e-19 99.0 132 43.2
FAN09G1397 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.1e-18 98.2 213 34.3
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 1.1e-18 98.2 199 32.2
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 8.4e-16 88.6 150 32.7
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 1.9e-15 87.4 88 50.0
AUR62008635 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.9e-12 77.4 95 41.1
AUR62015500 Chenopodium quinoa HOM05D004427 ORTHO05D005381 6.3e-11 72.4 79 45.6
AUR62002202 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.3e-08 64.7 76 44.7
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 5.0e-08 62.8 194 28.4


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