Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.9e-32 141.7 64 100.0
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 1.7e-25 118.6 57 91.2
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 7.3e-24 113.2 55 87.3
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 7.3e-24 113.2 55 85.5
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.8e-23 111.3 57 86.0
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 4.0e-22 107.5 56 78.6
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 6.8e-22 106.7 57 82.5
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 6.8e-22 106.7 57 82.5
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 6.8e-22 106.7 57 82.5
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 8.9e-22 106.3 55 81.8
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 8.9e-22 106.3 57 77.2
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.2e-21 105.9 56 80.4
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.2e-21 105.9 57 78.9
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 1.2e-21 105.9 57 78.9
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 1.2e-21 105.9 56 78.6
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.0e-21 105.1 54 83.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 2.6e-21 104.8 56 80.4
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.6e-21 104.8 54 81.5
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 3.4e-21 104.4 56 80.4
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 4.4e-21 104.0 57 73.7
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 4.4e-21 104.0 53 81.1
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 5.7e-21 103.6 57 75.4
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 5.7e-21 103.6 57 75.4
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 5.7e-21 103.6 56 75.0
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 5.7e-21 103.6 57 77.2
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 5.7e-21 103.6 54 81.5
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 5.7e-21 103.6 57 73.7
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 7.5e-21 103.2 57 78.9
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 7.5e-21 103.2 57 71.9
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.7e-20 102.1 57 73.7
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 1.7e-20 102.1 57 77.2
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.7e-20 102.1 56 75.0
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 2.2e-20 101.7 56 76.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 2.2e-20 101.7 56 76.8
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 2.2e-20 101.7 56 71.4
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.2e-20 101.7 53 81.1
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 2.2e-20 101.7 57 73.7
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 2.2e-20 101.7 53 79.2
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 2.9e-20 101.3 57 71.9
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.9e-20 101.3 53 79.2
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 3.7e-20 100.9 57 73.7
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 3.7e-20 100.9 55 74.5
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 4.9e-20 100.5 56 69.6
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 4.9e-20 100.5 52 78.8
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 4.9e-20 100.5 57 73.7
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 6.4e-20 100.1 57 71.9
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 8.3e-20 99.8 52 78.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 8.3e-20 99.8 53 77.4
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 8.3e-20 99.8 53 77.4
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 1.1e-19 99.4 53 79.2
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.1e-19 99.4 55 74.5
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 1.1e-19 99.4 52 78.8
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.1e-19 99.4 53 77.4
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.8e-19 98.6 53 75.5
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.8e-19 98.6 57 73.7
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.8e-19 98.6 55 72.7
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.8e-19 98.6 55 72.7
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 2.4e-19 98.2 54 74.1
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 2.4e-19 98.2 52 80.8
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 2.4e-19 98.2 54 72.2
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 3.2e-19 97.8 54 70.4
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 3.2e-19 97.8 54 70.4
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 3.2e-19 97.8 54 70.4
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 3.2e-19 97.8 54 70.4
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 3.2e-19 97.8 54 70.4
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 3.2e-19 97.8 52 76.9
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 4.1e-19 97.4 54 70.4
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 4.1e-19 97.4 55 69.1
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.1e-19 97.4 55 69.1
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.1e-19 97.4 55 69.1
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.1e-19 97.4 55 69.1
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 4.1e-19 97.4 57 73.7
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 5.4e-19 97.1 57 75.4
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 7.0e-19 96.7 58 69.0
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 7.0e-19 96.7 53 75.5
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 9.2e-19 96.3 54 75.9
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 1.2e-18 95.9 54 70.4
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.2e-18 95.9 54 72.2
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.2e-18 95.9 54 72.2
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.2e-18 95.9 55 65.5
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 1.6e-18 95.5 55 65.5
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 2.0e-18 95.1 52 75.0
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 2.0e-18 95.1 53 75.5
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 2.7e-18 94.7 58 69.0
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 2.7e-18 94.7 52 73.1
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 4.6e-18 94.0 57 64.9
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 5.9e-18 93.6 54 70.4
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 7.8e-18 93.2 55 65.5
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 7.8e-18 93.2 56 75.0
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.3e-17 92.4 47 85.1
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.3e-17 92.4 53 77.4
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 1.7e-17 92.0 54 68.5
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 2.3e-17 91.7 53 71.7
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 3.9e-17 90.9 58 69.0
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 8.6e-17 89.7 52 63.5
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.5e-16 89.0 50 72.0
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.9e-16 88.6 53 67.9
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 2.5e-16 88.2 53 66.0
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 3.3e-16 87.8 52 63.5
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.0e-14 82.8 61 52.5
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 3.1e-14 81.3 53 66.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.8e-14 80.1 57 54.4
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 2.2e-12 75.1 39 87.2
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.1e-11 72.8 49 63.3
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.6e-10 68.9 55 52.7
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 1.7e-09 65.5 54 50.0
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.9e-09 64.3 43 67.4
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.6e-09 63.2 43 65.1
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 9.5e-08 59.7 54 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.4e-06 55.8 55 40.0
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 3.1e-06 54.7 55 40.0


User provided reference genes

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