Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 3.0e-261 905.2 670 100.0
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 3.8e-232 808.5 674 90.7
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 1.7e-224 783.1 671 89.6
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.0e-220 769.6 671 89.4
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 2.4e-218 762.7 675 88.0
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 3.3e-212 742.3 618 92.7
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.5e-207 726.9 671 83.9
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 2.5e-207 726.1 675 84.1
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 3.2e-207 725.7 675 83.7
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 6.3e-203 711.4 679 83.9
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 5.9e-201 704.9 669 83.4
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 1.3e-200 703.7 670 82.2
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 1.3e-200 703.7 674 81.8
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 2.2e-200 703.0 674 83.1
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 3.8e-200 702.2 671 82.6
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 3.2e-199 699.1 670 81.9
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 3.2e-199 699.1 670 81.8
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 4.2e-199 698.7 671 82.3
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 7.2e-199 698.0 668 82.0
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.2e-198 697.2 670 82.1
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 3.6e-198 695.7 671 81.7
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 3.6e-198 695.7 671 82.4
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 6.1e-198 694.9 678 80.8
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 6.1e-198 694.9 672 81.5
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 6.1e-198 694.9 671 82.3
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 8.0e-198 694.5 671 82.1
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 8.0e-198 694.5 673 83.1
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 3.0e-197 692.6 669 82.8
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 4.0e-197 692.2 671 81.8
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 8.8e-197 691.0 676 82.8
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 1.2e-196 690.6 671 81.8
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 2.0e-196 689.9 672 81.8
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 5.7e-196 688.3 669 81.9
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 7.5e-196 688.0 674 81.9
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 9.8e-196 687.6 676 83.0
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 1.3e-195 687.2 670 81.8
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 2.2e-195 686.4 670 81.2
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 2.8e-195 686.0 670 81.5
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 4.8e-195 685.3 679 81.3
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 3.1e-194 682.6 677 81.1
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 4.1e-194 682.2 672 82.1
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 7.0e-194 681.4 457 77.0
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 9.1e-194 681.0 668 81.9
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 2.7e-193 679.5 677 80.6
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 3.5e-193 679.1 669 81.2
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 1.0e-192 677.6 677 80.8
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 1.3e-192 677.2 462 76.6
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 5.0e-192 675.2 685 79.3
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 5.0e-192 675.2 462 77.9
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 6.5e-192 674.9 681 81.2
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 6.5e-192 674.9 669 81.0
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.1e-191 674.1 686 79.3
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 3.2e-191 672.5 457 75.5
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 3.2e-191 672.5 671 80.6
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 4.2e-191 672.2 663 78.3
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 2.3e-189 666.4 459 74.3
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 3.0e-189 666.0 674 80.0
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 4.4e-188 662.1 670 80.4
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 7.5e-188 661.4 474 73.6
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 1.2e-185 654.1 670 79.1
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.2e-185 654.1 457 74.0
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 7.2e-183 644.8 705 76.5
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.0e-181 641.0 688 77.2
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 7.0e-178 628.2 668 78.9
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.0e-177 626.7 668 79.0
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 4.6e-177 625.5 665 79.2
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.3e-176 623.2 668 78.7
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 2.9e-176 622.9 672 77.1
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.5e-175 620.5 669 77.6
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 3.3e-175 619.4 604 70.2
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 1.4e-173 614.0 670 77.2
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 4.0e-173 612.5 670 77.0
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.2e-172 610.9 670 76.7
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 2.6e-172 609.8 671 77.0
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 2.4e-170 603.2 679 75.7
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 3.2e-170 602.8 670 76.3
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 3.2e-170 602.8 670 76.3
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 1.7e-168 597.0 670 73.9
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.3e-168 596.7 669 65.8
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 2.3e-168 596.7 456 70.2
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 6.2e-166 588.6 669 74.6
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 3.1e-165 586.3 571 86.7
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 6.8e-165 585.1 671 75.0
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 8.9e-165 584.7 578 58.5
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 1.2e-164 584.3 612 76.3
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.5e-164 583.9 668 75.0
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 2.0e-164 583.6 671 75.1
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.4e-164 582.8 728 67.4
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 7.5e-164 581.6 670 74.8
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 1.4e-162 577.4 670 74.9
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 2.4e-162 576.6 669 74.0
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 3.2e-162 576.2 669 73.2
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.2e-161 574.3 568 86.8
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 6.0e-161 572.0 671 74.1
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 2.3e-160 570.1 671 74.4
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 2.5e-159 566.6 463 68.0
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 1.2e-156 557.8 460 64.1
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 2.0e-156 557.0 465 63.7
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 5.8e-156 555.4 671 73.0
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 9.9e-156 554.7 671 73.0
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 1.4e-154 550.8 392 73.7
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 1.8e-149 533.9 442 65.8
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 1.2e-148 531.2 456 61.6
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 3.9e-144 516.2 571 80.0
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 4.0e-141 506.1 704 67.9
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.9e-135 487.3 292 90.1
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 4.9e-131 472.6 671 68.4
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.1e-130 471.5 356 73.0
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 7.9e-129 465.3 680 65.4
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 8.1e-126 455.3 631 59.7
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 1.3e-123 448.0 463 53.1
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 2.1e-118 430.6 318 72.6
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 1.5e-116 424.5 279 77.8
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 7.7e-108 395.6 411 52.1
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.5e-103 381.3 671 64.2
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 1.8e-72 278.1 194 75.3
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 1.6e-68 265.0 388 45.6
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 1.2e-60 238.8 471 34.8
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 3.0e-59 234.2 577 48.9
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 3.9e-59 233.8 279 55.6
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.6e-57 227.3 165 66.7
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 8.9e-56 222.6 141 79.4
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 4.9e-54 216.9 484 31.2
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 1.4e-53 215.3 136 79.4
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 1.9e-53 214.9 193 52.8
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 1.0e-51 209.1 404 41.6
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.2e-49 202.2 530 29.2
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.7e-49 200.3 157 67.5
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 5.8e-47 193.4 143 71.3
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 4.7e-41 173.7 130 63.8
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 1.8e-40 171.8 292 94.9
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.9e-38 164.5 143 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 2.7e-36 157.9 147 54.4
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 3.5e-36 157.5 290 37.6
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 4.3e-34 150.6 116 69.8
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 8.1e-25 119.8 73 86.3
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.8e-24 118.6 83 74.7
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 1.1e-21 109.4 286 35.7
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 2.7e-20 104.8 110 53.6
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 1.3e-19 102.4 522 23.4
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.6e-17 94.4 69 60.9
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.4e-16 92.4 75 64.0
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 2.6e-15 88.2 509 24.4
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 4.2e-13 80.9 55 74.5
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.7e-12 78.2 48 83.3
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 6.7e-11 73.6 185 30.8
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 8.2e-09 66.6 49 73.5
Dinv40325 Davidia involucrata HOM05D004632 ORTHO05D005556 1.2e-07 62.8 37 86.5
Actinidia36729 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.0e-07 62.0 135 34.1
Zm00001eb086350 Zea mays HOM05D008576 ORTHO05D000385 2.6e-07 61.6 49 71.4
Os07g0205200 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 4.5e-07 60.8 86 44.2
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 7.6e-07 60.1 43 72.1
Zm00001eb239900 Zea mays HOM05D004632 ORTHO05D005556 1.0e-06 59.7 49 69.4
TAR648G0003 Trochodendron aralioides HOM05D004632 ORTHO05D005556 2.2e-06 58.5 56 64.3


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