Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.1e-105 386.7 200 100.0
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.1e-46 190.7 135 76.3
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 7.5e-43 177.9 136 72.1
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.0e-39 167.5 133 68.4
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 1.4e-36 157.1 152 61.8
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.3e-36 156.4 134 64.9
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.3e-36 156.4 134 64.9
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 2.9e-34 149.4 132 60.6
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 2.4e-33 146.4 101 77.2
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 5.4e-33 145.2 106 72.6
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.7e-32 142.9 81 87.7
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 3.5e-32 142.5 79 86.1
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 4.6e-32 142.1 129 65.1
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.3e-31 140.6 108 69.4
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 1.7e-31 140.2 140 57.1
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 1.7e-31 140.2 140 57.1
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.7e-31 140.2 140 57.1
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 5.0e-31 138.7 106 67.0
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 5.0e-31 138.7 141 56.0
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 1.1e-30 137.5 100 71.0
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 1.9e-30 136.7 94 74.5
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 2.5e-30 136.3 138 61.6
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 3.3e-30 136.0 87 77.0
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 3.3e-30 136.0 87 77.0
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 5.6e-30 135.2 136 58.1
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 9.5e-30 134.4 120 63.3
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 9.5e-30 134.4 109 63.3
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 9.5e-30 134.4 104 68.3
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 1.2e-29 134.0 137 56.9
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 1.6e-29 133.7 114 61.4
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 2.1e-29 133.3 77 83.1
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 2.1e-29 133.3 137 56.2
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 2.8e-29 132.9 137 56.2
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 4.7e-29 132.1 137 56.2
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 6.2e-29 131.7 138 57.2
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 6.2e-29 131.7 137 53.3
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 1.1e-28 131.0 140 53.6
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 1.4e-28 130.6 81 80.2
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.4e-28 130.6 81 80.2
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 1.4e-28 130.6 81 80.2
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 1.4e-28 130.6 133 55.6
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.4e-28 130.6 103 68.0
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 2.3e-28 129.8 106 63.2
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 2.3e-28 129.8 80 80.0
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 3.1e-28 129.4 81 80.2
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 4.0e-28 129.0 80 81.2
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 4.0e-28 129.0 79 81.0
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 4.0e-28 129.0 79 81.0
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 4.0e-28 129.0 97 69.1
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 4.0e-28 129.0 120 60.0
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 5.2e-28 128.6 128 57.0
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 5.2e-28 128.6 80 77.5
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 5.2e-28 128.6 79 81.0
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 8.9e-28 127.9 96 67.7
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.2e-27 127.5 132 57.6
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 2.0e-27 126.7 106 64.2
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 2.6e-27 126.3 127 59.1
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 2.6e-27 126.3 127 59.1
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 3.4e-27 125.9 79 79.7
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 5.8e-27 125.2 81 76.5
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.3e-26 124.0 173 50.9
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 2.2e-26 123.2 93 71.0
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 2.2e-26 123.2 137 51.1
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 2.9e-26 122.9 105 61.9
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 3.7e-26 122.5 79 74.7
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 6.4e-26 121.7 85 74.1
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 8.3e-26 121.3 84 73.8
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 1.1e-25 120.9 83 74.7
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 1.1e-25 120.9 83 74.7
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 1.9e-25 120.2 93 68.8
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.9e-25 120.2 106 58.5
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 1.9e-25 120.2 106 64.2
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-25 120.2 106 64.2
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-25 120.2 106 64.2
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 2.4e-25 119.8 132 53.8
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.4e-25 119.8 107 63.6
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 4.1e-25 119.0 89 69.7
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 4.1e-25 119.0 89 69.7
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 4.1e-25 119.0 89 69.7
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 5.4e-25 118.6 85 70.6
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 5.4e-25 118.6 132 54.5
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 7.0e-25 118.2 85 70.6
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 7.0e-25 118.2 80 75.0
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 7.0e-25 118.2 137 51.8
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.2e-25 117.9 106 63.2
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.2e-25 117.9 106 64.2
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 1.2e-24 117.5 125 55.2
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 1.2e-24 117.5 80 72.5
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 1.2e-24 117.5 110 61.8
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 2.0e-24 116.7 82 73.2
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 2.7e-24 116.3 81 72.8
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.7e-24 116.3 106 63.2
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 2.7e-24 116.3 75 76.0
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 4.6e-24 115.5 64 82.8
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 6.0e-24 115.2 119 54.6
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 3.9e-23 112.5 136 48.5
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 3.9e-23 112.5 133 51.1
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 5.0e-23 112.1 78 70.5
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 8.6e-23 111.3 154 46.8
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 1.1e-22 110.9 134 51.5
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 1.5e-22 110.5 78 69.2
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 4.7e-21 105.5 132 50.8
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 5.2e-20 102.1 139 48.2
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 6.4e-18 95.1 72 65.3
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 4.1e-17 92.4 114 54.4
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 6.0e-16 88.6 69 65.2
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 1.9e-14 83.6 156 41.7
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 3.1e-12 76.3 50 76.0
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 4.0e-12 75.9 78 52.6
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 5.2e-12 75.5 115 40.9
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 5.2e-12 75.5 70 60.0
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.2e-11 74.3 90 50.0
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 1.2e-11 74.3 90 50.0
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 4.9e-10 68.9 44 72.7
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 2.4e-09 66.6 74 43.2
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.3e-07 60.8 81 42.0
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 2.5e-06 56.6 60 46.7
Actinidia34082 Actinidia chinensis HOM05D005908 ORTHO05D007235 4.3e-06 55.8 65 58.5


User provided reference genes

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