Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007559 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 6.5e-69 263.8 126 100.0
CSS0004101 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 1.5e-68 262.7 126 99.2
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 2.5e-52 208.8 110 86.4
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 5.2e-50 201.1 106 85.8
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 1.1e-47 193.4 105 82.9
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 4.6e-46 188.0 104 80.8
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 1.0e-45 186.8 106 79.2
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 1.0e-45 186.8 104 81.7
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 1.7e-45 186.0 104 82.7
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 6.6e-45 184.1 104 82.7
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 1.5e-44 183.0 105 80.0
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 1.9e-44 182.6 106 80.2
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 1.9e-44 182.6 105 73.3
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 1.9e-44 182.6 104 78.8
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 2.5e-44 182.2 104 76.9
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 2.5e-44 182.2 104 79.8
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 2.5e-44 182.2 104 81.7
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.3e-44 181.8 104 79.8
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 4.3e-44 181.4 114 72.8
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 4.3e-44 181.4 104 80.8
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 9.5e-44 180.3 104 79.8
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 9.5e-44 180.3 104 79.8
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 1.2e-43 179.9 104 76.0
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 1.6e-43 179.5 107 72.9
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 2.1e-43 179.1 106 76.4
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 3.6e-43 178.3 104 77.9
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 3.6e-43 178.3 104 79.8
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.6e-43 178.3 104 78.8
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 3.6e-43 178.3 102 79.4
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 4.7e-43 177.9 106 76.4
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 8.1e-43 177.2 104 76.9
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 8.1e-43 177.2 106 74.5
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 1.1e-42 176.8 106 75.5
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 1.1e-42 176.8 102 78.4
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 1.4e-42 176.4 103 76.7
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 1.8e-42 176.0 103 76.7
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 1.8e-42 176.0 103 77.7
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 2.3e-42 175.6 102 76.5
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 3.1e-42 175.3 103 75.7
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 4.0e-42 174.9 104 74.0
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 5.2e-42 174.5 104 76.0
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 5.2e-42 174.5 103 76.7
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 5.2e-42 174.5 105 75.2
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 5.2e-42 174.5 107 75.7
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 8.9e-42 173.7 106 71.7
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 1.2e-41 173.3 105 72.4
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 1.2e-41 173.3 103 72.8
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 2.6e-41 172.2 103 73.8
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 3.4e-41 171.8 104 75.0
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 3.4e-41 171.8 105 76.2
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 4.4e-41 171.4 105 74.3
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 5.8e-41 171.0 103 76.7
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 5.8e-41 171.0 103 71.8
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 7.5e-41 170.6 104 72.1
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 7.5e-41 170.6 104 72.1
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 9.8e-41 170.2 111 70.3
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 9.8e-41 170.2 111 70.3
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 9.8e-41 170.2 111 70.3
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 9.8e-41 170.2 104 76.0
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 9.8e-41 170.2 104 76.0
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 1.3e-40 169.9 105 72.4
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.7e-40 169.5 105 73.3
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.7e-40 169.5 105 73.3
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.7e-40 169.5 105 73.3
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 1.7e-40 169.5 105 73.3
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 1.7e-40 169.5 103 70.9
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 2.2e-40 169.1 105 71.4
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 2.2e-40 169.1 105 71.4
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 6.4e-40 167.5 105 72.4
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 6.4e-40 167.5 105 71.4
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 8.3e-40 167.2 104 74.0
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 1.4e-39 166.4 107 70.1
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 1.9e-39 166.0 103 73.8
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 3.2e-39 165.2 103 69.9
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 3.2e-39 165.2 109 67.0
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 4.1e-39 164.9 105 69.5
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 9.2e-39 163.7 104 72.1
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 2.7e-38 162.2 105 70.5
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 6.0e-38 161.0 105 67.6
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 1.7e-37 159.5 107 70.1
TAR629G1361 Trochodendron aralioides HOM05D006178 ORTHO05D007504 1.7e-37 159.5 88 81.8
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 3.0e-37 158.7 102 69.6
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 6.6e-37 157.5 134 59.0
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 3.3e-36 155.2 104 67.3
QL03p035827 Quercus lobata HOM05D006178 ORTHO05D007504 1.2e-35 153.3 89 77.5
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 6.2e-35 151.0 128 57.8
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 1.8e-34 149.4 111 65.8
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 5.2e-34 147.9 83 79.5
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 6.8e-34 147.5 103 66.0
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 6.8e-34 147.5 105 63.8
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 8.9e-34 147.1 103 66.0
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 9.9e-33 143.7 89 71.9
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 2.9e-32 142.1 105 60.0
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 6.6e-29 131.0 87 65.5
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 6.6e-29 131.0 104 55.8
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 3.9e-21 105.1 103 53.4
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 1.3e-19 100.1 115 51.3
Nn3g18365 Nelumbo nucifera HOM05D006178 ORTHO05D007504 2.8e-19 99.0 49 85.7
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 3.6e-19 98.6 55 83.6
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 2.9e-16 89.0 55 69.1
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 8.4e-16 87.4 102 42.2
Sed0025662 Sechium edule HOM05D006178 ORTHO05D007504 8.4e-16 87.4 58 67.2
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 3.9e-13 78.6 106 37.7
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 3.3e-12 75.5 56 66.1
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 3.6e-11 72.0 54 63.0
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 8.4e-08 60.8 35 71.4
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 9.3e-07 57.4 92 40.2


User provided reference genes

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