Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.1e-194 681.4 391 100.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-181 639.8 391 88.0
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.4e-106 390.6 375 63.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.9e-95 353.6 354 65.5
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.6e-89 334.0 388 61.6
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 5.3e-85 318.9 277 65.3
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.6e-84 316.6 376 55.1
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 6.5e-83 312.0 371 55.0
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 5.5e-82 308.9 278 60.4
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 3.9e-80 302.8 293 59.4
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.0e-79 300.4 377 55.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.0e-79 300.4 278 63.3
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.8e-78 296.6 282 61.7
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 6.3e-78 295.4 224 72.8
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.4e-77 294.3 277 60.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.8e-77 293.9 280 58.9
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 9.1e-77 291.6 280 61.4
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.6e-76 290.8 294 57.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 5.9e-76 288.9 386 53.6
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.9e-75 286.6 280 60.4
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 8.5e-75 285.0 377 51.2
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.1e-74 284.6 279 59.5
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 2.5e-74 283.5 281 60.1
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.2e-73 281.2 272 59.2
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 8.0e-73 278.5 371 55.5
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.0e-72 278.1 279 59.5
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.8e-72 277.3 270 59.3
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.3e-72 276.9 278 58.3
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.0e-72 276.6 277 58.5
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.5e-71 274.2 280 55.4
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.6e-71 273.5 281 58.7
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.3e-71 273.1 289 55.0
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.4e-71 272.7 265 57.0
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 9.7e-71 271.6 252 58.7
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.3e-70 271.2 279 57.0
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.7e-70 270.8 265 56.6
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 4.8e-70 269.2 278 58.6
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 8.2e-70 268.5 279 54.5
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.8e-69 267.3 368 48.9
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.8e-69 267.3 273 55.3
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 5.3e-69 265.8 277 55.6
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 7.0e-69 265.4 277 57.4
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 4.5e-68 262.7 276 54.7
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.3e-67 261.2 354 57.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 8.5e-67 258.5 373 52.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 8.5e-67 258.5 376 50.5
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.5e-66 256.9 298 51.7
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.1e-65 253.8 376 50.5
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.1e-65 253.8 278 53.2
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.4e-64 251.1 276 52.2
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 6.8e-64 248.8 277 55.2
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.2e-63 248.1 274 52.6
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.2e-63 248.1 375 44.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.5e-63 247.7 370 52.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.4e-63 246.5 280 51.1
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 7.5e-63 245.4 274 54.7
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.8e-62 243.4 367 53.1
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.7e-62 243.0 298 50.0
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 4.8e-62 242.7 374 48.9
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 8.3e-62 241.9 366 50.3
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.4e-61 241.1 274 55.1
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.4e-61 241.1 381 49.6
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.4e-61 240.4 274 54.0
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 3.1e-61 240.0 272 52.6
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 5.4e-61 239.2 282 53.5
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 5.4e-61 239.2 369 49.1
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.2e-60 238.0 273 51.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.6e-60 237.7 274 54.7
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 3.5e-60 236.5 374 53.7
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.5e-60 236.1 267 54.3
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.3e-59 234.6 279 50.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.3e-59 234.6 288 50.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.3e-59 234.6 408 43.4
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 2.2e-59 233.8 278 50.4
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 3.8e-59 233.0 159 75.5
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 4.2e-58 229.6 321 45.8
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 7.2e-58 228.8 279 48.7
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.2e-57 228.0 267 52.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.6e-57 227.6 369 50.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.7e-57 226.9 379 43.8
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 4.7e-57 226.1 210 59.0
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 8.0e-57 225.3 281 47.3
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 8.0e-57 225.3 269 48.7
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.4e-56 224.6 274 48.9
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.4e-56 224.6 278 47.8
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.0e-56 223.4 284 47.2
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.5e-55 221.1 283 47.0
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 2.0e-55 220.7 276 48.2
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.4e-55 219.5 282 46.5
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 5.7e-55 219.2 275 49.8
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 5.7e-55 219.2 374 42.5
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 7.5e-55 218.8 276 46.4
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.8e-54 216.9 485 35.9
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 5.9e-52 209.1 214 56.5
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 5.0e-51 206.1 264 48.1
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 4.3e-50 203.0 276 48.2
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.6e-49 199.9 266 48.9
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.8e-48 197.6 265 47.5
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.2e-47 194.9 242 47.1
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 3.2e-45 186.8 288 43.4
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.7e-44 183.7 276 44.2
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.7e-44 183.7 272 44.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.9e-42 177.6 271 42.8
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.6e-41 174.5 368 38.9
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 1.8e-40 171.0 252 45.6
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 5.2e-40 169.5 332 38.0
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 3.5e-36 156.8 213 44.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.5e-36 156.8 145 57.9
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 8.9e-32 142.1 299 40.8
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.0e-31 141.0 271 37.6
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.3e-30 138.3 257 38.5
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 3.6e-25 120.2 275 32.4
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 6.2e-25 119.4 292 32.5
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 7.6e-23 112.5 187 42.2
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.1e-21 108.6 268 30.2
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.4e-21 107.5 151 45.7
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.0e-19 102.1 85 67.1
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 4.0e-16 90.1 151 39.1
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.3e-11 75.1 211 36.0
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.5e-10 71.6 205 32.7
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 5.6e-10 69.7 84 46.4
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.1e-08 63.9 215 27.9
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 4.0e-08 63.5 225 28.9


User provided reference genes

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