Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007402 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 4.8e-66 254.2 116 100.0
CSS0048803 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 5.7e-51 204.1 111 83.8
CSS0048833 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 3.8e-39 164.9 113 71.7
CSS0003135 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 2.3e-36 155.6 113 67.3
Oeu014137.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-32 141.7 113 63.7
Hma1.2p1_0109F.1_g052480 Hydrangea macrophylla HOM05D000014 ORTHO05D000016 2.0e-27 125.9 112 56.2
PSO713G0020 Papaver somniferum HOM05D000014 ORTHO05D000016 9.7e-27 123.6 111 53.2
PSO161G0113 Papaver somniferum HOM05D000014 ORTHO05D000016 4.1e-25 118.2 111 50.5
PSO017G4520 Papaver somniferum HOM05D000014 ORTHO05D000016 7.0e-25 117.5 111 49.5
PSO478G4345 Papaver somniferum HOM05D000014 ORTHO05D000016 7.0e-25 117.5 111 50.5
PSO063G4150 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-24 116.7 113 50.4
PSO699G0005 Papaver somniferum HOM05D000014 ORTHO05D000016 3.2e-22 108.6 109 47.7
PSO675G1248 Papaver somniferum HOM05D000014 ORTHO05D000016 9.7e-19 97.1 72 55.6
CANSAT54G0005 Cannabis sativa HOM05D000014 ORTHO05D000016 4.1e-17 91.7 110 40.0
Hma1.2p1_0491F.1_g164670 Hydrangea macrophylla HOM05D020370 ORTHO05D000016 4.1e-17 91.7 119 41.2
Actinidia20861 Actinidia chinensis HOM05D000014 ORTHO05D000093 2.7e-16 89.0 153 32.7
Actinidia22454 Actinidia chinensis HOM05D000014 ORTHO05D000016 2.7e-16 89.0 153 32.7
CANSAT54G1893 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-16 88.2 116 37.9
Rhsim01G0103800 Rhododendron simsii HOM05D017964 ORTHO05D000016 7.7e-16 87.4 126 38.9
PSO478G4299 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-15 86.3 67 50.7
CANSAT11G0431 Cannabis sativa HOM05D000014 ORTHO05D000016 8.5e-15 84.0 116 36.2
QL07p002117 Quercus lobata HOM05D000014 ORTHO05D000016 8.5e-15 84.0 116 36.2
CANSAT25G1869 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-14 83.2 110 38.2
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 1.5e-14 83.2 116 37.1
CANSAT78G0236 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-14 82.0 116 36.2
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 3.2e-14 82.0 116 38.8
CANSAT64G0382 Cannabis sativa HOM05D000014 ORTHO05D000093 3.6e-13 78.6 83 37.3
EL10Ac6g14688 Beta vulgaris HOM05D000014 ORTHO05D000016 4.7e-13 78.2 102 41.2
EL10Ac5g11602 Beta vulgaris HOM05D000014 ORTHO05D000016 6.1e-13 77.8 86 45.3
FvH4_7g04071 Fragaria vesca HOM05D000014 ORTHO05D000016 6.1e-13 77.8 113 36.3
CANSAT25G3341 Cannabis sativa HOM05D000014 ORTHO05D000016 8.0e-13 77.4 95 37.9
CANSAT64G2125 Cannabis sativa HOM05D000014 ORTHO05D000016 8.0e-13 77.4 102 39.2
CANSAT56G2640 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-12 76.6 92 42.4
CANSAT25G3793 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-12 75.9 109 37.6
CSS0006187 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 4.0e-12 75.1 85 40.0
CANSAT11G2190 Cannabis sativa HOM05D000014 ORTHO05D000016 4.0e-12 75.1 92 41.3
CANSAT25G0790 Cannabis sativa HOM05D000014 ORTHO05D000016 4.0e-12 75.1 94 41.5
CANSAT25G2927 Cannabis sativa HOM05D000014 ORTHO05D000016 4.0e-12 75.1 92 41.3
CANSAT35G0992 Cannabis sativa HOM05D000014 ORTHO05D000093 4.0e-12 75.1 92 41.3
Migut.H02212 Erythranthe guttata HOM05D001842 ORTHO05D001849 5.2e-12 74.7 118 39.8
CANSAT54G0976 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-11 73.6 104 39.4
CSS0007499 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 2.6e-11 72.4 77 41.6
CSS0040867 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 2.6e-11 72.4 77 41.6
CSS0008202 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 3.4e-11 72.0 77 41.6
PSO478G0933 Papaver somniferum HOM05D000014 ORTHO05D000016 3.4e-11 72.0 61 49.2
CANSAT54G2497 Cannabis sativa HOM05D000014 ORTHO05D000016 5.7e-11 71.2 110 35.5
PSO782G2400 Papaver somniferum HOM05D000014 ORTHO05D000016 5.7e-11 71.2 65 53.8
QL08p059259 Quercus lobata HOM05D000014 ORTHO05D000016 5.7e-11 71.2 103 36.9
CANSAT25G1693 Cannabis sativa HOM05D000014 ORTHO05D000016 7.5e-11 70.9 100 36.0
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 7.5e-11 70.9 103 38.8
CANSAT11G0489 Cannabis sativa HOM05D000014 ORTHO05D000016 9.8e-11 70.5 109 33.0
FvH4_3g31201 Fragaria vesca HOM05D000014 ORTHO05D000093 9.8e-11 70.5 105 37.1
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 9.8e-11 70.5 103 37.9
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 9.8e-11 70.5 103 37.9
CSS0017697 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 1.3e-10 70.1 77 41.6
MBI19_g07871_MAGBIO Magnolia biondii HOM05D020370 ORTHO05D019279 1.3e-10 70.1 87 39.1
RcHm_v2.0_Chr5g0080601 Rosa chinensis HOM05D000014 ORTHO05D015124 1.3e-10 70.1 71 40.8
CANSAT11G2114 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-10 69.7 109 33.0
PSO478G0157 Papaver somniferum HOM05D000014 ORTHO05D000016 2.2e-10 69.3 61 47.5
CANSAT21G0085 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-10 68.9 74 39.2
CANSAT78G0058 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-10 68.9 74 39.2
CANSAT80G0973 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-10 68.9 109 33.0
PSO782G2918 Papaver somniferum HOM05D000014 ORTHO05D000093 2.8e-10 68.9 61 49.2
CANSAT01G2491 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-10 68.6 74 39.2
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 3.7e-10 68.6 92 42.4
CANSAT01G2924 Cannabis sativa HOM05D000014 ORTHO05D000016 4.8e-10 68.2 65 43.1
CANSAT21G1378 Cannabis sativa HOM05D000014 ORTHO05D000016 4.8e-10 68.2 65 43.1
PSO782G0100 Papaver somniferum HOM05D000014 ORTHO05D000016 4.8e-10 68.2 40 67.5
CANSAT01G3201 Cannabis sativa HOM05D000014 ORTHO05D000016 6.3e-10 67.8 65 43.1
vmacro01530 Vaccinium macrocarpon HOM05D000080 ORTHO05D000053 6.3e-10 67.8 109 37.6
CSS0041109 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 8.3e-10 67.4 77 39.0
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 8.3e-10 67.4 98 38.8
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 8.3e-10 67.4 105 35.2
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 8.3e-10 67.4 105 35.2
TWI81G0756 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.3e-10 67.4 109 34.9
CSS0011490 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 1.1e-09 67.0 64 40.6
TWI81G1095 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.1e-09 67.0 109 34.9
PSO541G3525 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 61 45.9
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 1.4e-09 66.6 105 35.2
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
PGR142G4155 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 66.6 105 35.2
TWI39G0697 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.4e-09 66.6 109 33.9
Cpa.g.sc32.5 Carica papaya HOM05D000014 ORTHO05D000016 1.8e-09 66.2 98 38.8
PSO339G0601 Papaver somniferum HOM05D000014 ORTHO05D000016 1.8e-09 66.2 64 42.2
TWI32G0335 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.8e-09 66.2 77 42.9
TWI77G0341 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.8e-09 66.2 77 42.9
PSO541G4034 Papaver somniferum HOM05D000014 ORTHO05D000016 2.4e-09 65.9 81 39.5
PGR042G0504 Punica granatum HOM05D000014 ORTHO05D000016 2.4e-09 65.9 105 34.3
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 2.4e-09 65.9 94 38.3
PSO832G2397 Papaver somniferum HOM05D000014 ORTHO05D000016 3.1e-09 65.5 81 40.7
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 65.5 94 38.3
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 65.5 94 38.3
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 65.5 94 38.3
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 65.5 94 38.3
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 3.1e-09 65.5 94 38.3
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 3.1e-09 65.5 94 38.3
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 4.1e-09 65.1 105 35.2
TWI74G1255 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.1e-09 65.1 99 36.4
CANSAT11G2138 Cannabis sativa HOM05D000014 ORTHO05D000016 5.4e-09 64.7 105 33.3
PSO384G2741 Papaver somniferum HOM05D000014 ORTHO05D000016 5.4e-09 64.7 85 38.8
PSO541G3434 Papaver somniferum HOM05D000014 ORTHO05D000016 5.4e-09 64.7 61 49.2
CSS0026596 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 7.0e-09 64.3 77 37.7
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 7.0e-09 64.3 92 38.0
PSO063G5969 Papaver somniferum HOM05D000014 ORTHO05D000016 7.0e-09 64.3 59 47.5
PSO478G4079 Papaver somniferum HOM05D000014 ORTHO05D000016 7.0e-09 64.3 61 44.3
TWI09G0144 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.0e-09 64.3 73 42.5
TWI36G0746 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.0e-09 64.3 73 42.5
TWI63G1826 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 7.0e-09 64.3 73 42.5
CANSAT78G0989 Cannabis sativa HOM05D000014 ORTHO05D000016 9.1e-09 63.9 65 40.0
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 9.1e-09 63.9 80 41.2
TWI14G0357 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 9.1e-09 63.9 73 41.1
CANSAT21G1648 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-08 63.5 74 36.5
PSO832G0712 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-08 63.5 61 44.3
CANSAT80G0204 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-08 63.2 91 36.3
PSO675G3954 Papaver somniferum HOM05D000014 ORTHO05D000016 1.6e-08 63.2 61 45.9
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 1.6e-08 63.2 80 41.2
PSO782G1166 Papaver somniferum HOM05D000014 ORTHO05D000016 2.0e-08 62.8 61 45.9
PSO782G5672 Papaver somniferum HOM05D000014 ORTHO05D000016 2.0e-08 62.8 61 44.3
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 2.0e-08 62.8 104 34.6
FvH4_4g14302 Fragaria vesca HOM05D000014 ORTHO05D000093 2.7e-08 62.4 93 34.4
SGA_v2.0_scaffold55G19891 Striga asiatica HOM05D000014 ORTHO05D000093 2.7e-08 62.4 73 42.5
PSO478G3785 Papaver somniferum HOM05D000014 ORTHO05D000016 3.5e-08 62.0 87 39.1
PSO541G5057 Papaver somniferum HOM05D000014 ORTHO05D000016 3.5e-08 62.0 61 45.9
PSO675G5083 Papaver somniferum HOM05D000014 ORTHO05D000016 3.5e-08 62.0 59 44.1
Hund15124 Selenicereus undatus HOM05D011980 ORTHO05D013507 3.5e-08 62.0 93 40.9
CANSAT01G2631 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 61.6 61 44.3
CANSAT64G1241 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 61.6 61 44.3
CANSAT80G2515 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 61.6 61 44.3
MBI14_g40112_MAGBIO Magnolia biondii HOM05D000014 ORTHO05D019279 4.5e-08 61.6 67 43.3
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 4.5e-08 61.6 59 50.8
PSO478G3856 Papaver somniferum HOM05D000014 ORTHO05D000016 4.5e-08 61.6 59 45.8
CANSAT01G2360 Cannabis sativa HOM05D000014 ORTHO05D000016 5.9e-08 61.2 92 35.9
Oeu051488.1 Olea europaea HOM05D000014 ORTHO05D000016 5.9e-08 61.2 74 41.9
CANSAT21G1939 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-08 60.8 91 35.2
Hund30226 Selenicereus undatus HOM05D011980 ORTHO05D013507 7.7e-08 60.8 93 38.7
Ca_07325_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 1.3e-07 60.1 93 34.4
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 1.3e-07 60.1 65 46.2
Rhsim01G0069400 Rhododendron simsii HOM05D000014 ORTHO05D000016 1.3e-07 60.1 81 39.5
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.7e-07 59.7 105 35.2
CANSAT25G1287 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-07 59.7 77 42.9
FvH4_3g26316 Fragaria vesca HOM05D000014 ORTHO05D000016 2.3e-07 59.3 82 37.8
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 2.3e-07 59.3 74 41.9
PSO063G1908 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-07 59.3 89 34.8
PSO210G6029 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-07 59.3 89 34.8
SGA_v2.0_scaffold375G50241 Striga asiatica HOM05D000014 ORTHO05D000016 2.3e-07 59.3 84 40.5
Ah.03g144860 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.9e-07 58.9 105 33.3
Hund22891 Selenicereus undatus HOM05D000185 ORTHO05D013507 3.8e-07 58.5 87 44.8
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 5.0e-07 58.2 105 34.3
PSO478G3292 Papaver somniferum HOM05D000014 ORTHO05D000016 5.0e-07 58.2 59 44.1
Ca_22785_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.6e-07 57.8 111 32.4
PSO674G0098 Papaver somniferum HOM05D000014 ORTHO05D000016 8.6e-07 57.4 57 42.1
Oeu009438.1 Olea europaea HOM05D008689 ORTHO05D009530 1.1e-06 57.0 75 40.0
RcHm_v2.0_Chr1g0320831 Rosa chinensis HOM05D000014 ORTHO05D000093 1.1e-06 57.0 76 38.2
TWI56G0245 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.1e-06 57.0 73 35.6
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 1.5e-06 56.6 59 45.8
Oeu052650.1 Olea europaea HOM05D000014 ORTHO05D000016 1.5e-06 56.6 85 35.3
Ca_26731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 1.9e-06 56.2 85 34.1
FAN28G1030 Fragaria x ananassa HOM05D000014 ORTHO05D000016 1.9e-06 56.2 64 39.1
MD08G1150100 Malus domestica HOM05D000014 ORTHO05D000016 2.5e-06 55.8 78 35.9
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 2.5e-06 55.8 78 35.9
Oeu063720.1 Olea europaea HOM05D000014 ORTHO05D000016 2.5e-06 55.8 112 33.0
FvH4_1g29494 Fragaria vesca HOM05D000014 ORTHO05D000093 3.3e-06 55.5 77 37.7
FvH4_6g23372 Fragaria vesca HOM05D000014 ORTHO05D000016 3.3e-06 55.5 70 41.4
SGA_v2.0_scaffold125G33721 Striga asiatica HOM05D000014 ORTHO05D000093 3.3e-06 55.5 72 40.3
Actinidia02546 Actinidia chinensis HOM05D034054 ORTHO05D000016 5.5e-06 54.7 63 33.3
Ca_05093_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.2e-06 54.3 89 34.8
ECA233G1338 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.2e-06 54.3 80 32.5
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 7.2e-06 54.3 75 37.3
PSO478G0441 Papaver somniferum HOM05D000014 ORTHO05D000016 7.2e-06 54.3 81 37.0
FvH4_4g14130 Fragaria vesca HOM05D000014 ORTHO05D000093 9.5e-06 53.9 88 33.0
Oeu028652.1 Olea europaea HOM05D000014 ORTHO05D000016 9.5e-06 53.9 86 33.7
Thecc.03G049100 Theobroma cacao HOM05D000014 ORTHO05D000016 9.5e-06 53.9 111 31.5


User provided reference genes

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