Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.3e-65 251.1 124 100.0
CSS0027610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-43 178.7 128 67.2
CSS0035139 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-43 178.7 128 67.2
CSS0000227 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.3e-42 175.6 127 66.1
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-38 160.6 161 54.0
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.8e-32 141.4 157 47.1
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-30 134.0 147 51.0
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-25 119.8 132 50.0
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-23 112.1 159 39.6
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.0e-23 110.9 160 40.0
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.2e-22 110.2 154 38.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-22 109.0 158 39.2
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.5e-22 108.6 158 39.9
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-22 108.2 155 37.4
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-22 108.2 154 37.7
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-22 108.2 160 39.4
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-21 107.1 160 38.8
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-21 106.3 156 36.5
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-21 106.3 153 37.3
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-21 105.9 166 38.0
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-21 105.9 154 37.0
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-21 105.5 153 37.3
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-21 104.4 153 36.6
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-20 103.6 158 36.7
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-20 103.2 157 36.3
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-20 102.8 156 37.2
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-20 101.7 158 35.4
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-20 101.3 158 35.4
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-20 100.9 157 37.6
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-20 100.9 158 37.3
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.6e-19 98.6 158 34.8
CSS0013517 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-19 97.4 122 42.6
CSS0031822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.0e-19 97.4 78 56.4
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-17 91.3 149 36.2
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-16 90.1 158 34.2
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-16 89.7 133 38.3
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-16 89.4 73 56.2
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 3.7e-16 88.6 153 34.6
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 3.7e-16 88.6 153 32.0
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.3e-16 87.4 141 36.2
CSS0011382 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.4e-15 86.7 73 54.8
vmacro21508 Vaccinium macrocarpon HOM05D001386 ORTHO05D003791 4.1e-15 85.1 119 41.2
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 9.1e-15 84.0 161 32.3
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.2e-13 79.3 159 32.1
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 5.0e-13 78.2 154 29.2
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 8.5e-13 77.4 151 31.8
vmacro04689 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 1.5e-12 76.6 152 32.2
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 1.9e-12 76.3 67 50.7
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 2.5e-12 75.9 83 47.0
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 3.2e-12 75.5 150 30.0
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 4.2e-12 75.1 159 27.7
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 5.5e-12 74.7 159 27.7
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 5.5e-12 74.7 136 31.6
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 7.2e-12 74.3 159 28.3
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.2e-12 74.3 156 30.8
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 9.4e-12 73.9 152 32.9
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-11 73.2 58 51.7
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 8.0e-11 70.9 163 29.4
vmacro11643 Vaccinium macrocarpon HOM05D000490 ORTHO05D000785 1.4e-10 70.1 138 27.5
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 67.0 157 30.6
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.2e-09 67.0 151 29.1
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.5e-09 66.6 162 29.0
CSS0011514 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-09 66.2 58 53.4
TPR.G32733 Trifolium pratense HOM05D000005 ORTHO05D000012 2.6e-09 65.9 151 29.8
vmacro08688 Vaccinium macrocarpon HOM05D007024 ORTHO05D008865 3.4e-09 65.5 71 40.8
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 4.4e-09 65.1 151 27.8
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 5.7e-09 64.7 151 27.8
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 7.5e-09 64.3 112 34.8
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.5e-09 64.3 160 27.5
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 9.8e-09 63.9 160 26.2
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 1.3e-08 63.5 134 30.6
vmacro16752 Vaccinium macrocarpon HOM05D000112 ORTHO05D001248 1.7e-08 63.2 130 30.0
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-08 62.8 147 28.6
QL01p013568 Quercus lobata HOM05D000155 ORTHO05D000022 2.2e-08 62.8 156 29.5
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 2.8e-08 62.4 151 27.2
Solyc06g082170.2 Solanum lycopersicum HOM05D000314 ORTHO05D000189 3.7e-08 62.0 156 29.5
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 3.7e-08 62.0 156 30.1
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 4.9e-08 61.6 158 27.8
Ciclev10021474m.g Citrus clementina HOM05D000003 ORTHO05D000022 4.9e-08 61.6 71 39.4
Atru.chr10.897 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-08 60.8 126 30.2
Hma1.2p1_0028F.1_g017510 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 8.3e-08 60.8 80 38.8
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 60.5 156 30.1
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-07 60.5 74 41.9
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 1.4e-07 60.1 155 23.9
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-07 59.7 140 34.3
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.8e-07 59.7 151 27.2
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 1.8e-07 59.7 155 23.9
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 2.4e-07 59.3 107 38.3
Lj8C62T5 Lonicera japonica HOM05D000003 ORTHO05D000022 2.4e-07 59.3 101 31.7
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 3.1e-07 58.9 160 26.9
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 3.1e-07 58.9 158 27.2
RcHm_v2.0_Chr2g0125461 Rosa chinensis HOM05D000003 ORTHO05D000022 3.1e-07 58.9 158 24.1
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 4.1e-07 58.5 48 62.5
Psat3g207120 Pisum sativum HOM05D000003 ORTHO05D000022 4.1e-07 58.5 74 33.8
TPR.G33526 Trifolium pratense HOM05D000155 ORTHO05D000022 5.4e-07 58.2 153 27.5
Nitab4.5_0007388g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 9.2e-07 57.4 77 40.3
Sabra17G0024900 Salix brachista HOM05D000003 ORTHO05D000022 9.2e-07 57.4 161 26.7
THA.LOC104801226 Tarenaya hassleriana HOM05D007909 ORTHO05D000743 1.2e-06 57.0 149 24.8
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-06 56.6 160 26.9
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 1.6e-06 56.6 157 26.1
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 2.0e-06 56.2 73 42.5
Duzib205G0904 Durio zibethinus HOM05D007909 ORTHO05D000743 2.7e-06 55.8 152 25.7
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 2.7e-06 55.8 155 26.5
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 2.7e-06 55.8 161 26.1
vmacro11275 Vaccinium macrocarpon HOM05D001931 ORTHO05D001891 2.7e-06 55.8 60 41.7
Actinidia38557 Actinidia chinensis HOM05D000155 ORTHO05D000022 3.5e-06 55.5 69 40.6
Actinidia38559 Actinidia chinensis HOM05D000155 ORTHO05D000022 3.5e-06 55.5 69 40.6
CSS0020344 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.5e-06 55.5 39 66.7
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.5e-06 55.5 39 66.7
CSS0049549 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.5e-06 55.5 41 63.4
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 3.5e-06 55.5 157 28.7
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 3.5e-06 55.5 154 26.6
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-06 55.1 154 23.4
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 4.5e-06 55.1 39 66.7
Prupe.1G291700 Prunus persica HOM05D000061 ORTHO05D000050 4.5e-06 55.1 73 38.4
Prupe.7G199700 Prunus persica HOM05D000003 ORTHO05D000022 4.5e-06 55.1 71 39.4
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-06 54.7 162 26.5
Ca_11781_v3 Cicer arietinum L. HOM05D000155 ORTHO05D000022 5.9e-06 54.7 159 25.2
Hma1.2p1_0150F.1_g066640 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 5.9e-06 54.7 82 36.6
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-06 54.3 154 24.0
Atru.chr3.1505 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-06 54.3 156 25.0
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 7.7e-06 54.3 159 28.3
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 7.7e-06 54.3 39 64.1
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-06 54.3 122 27.9
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 7.7e-06 54.3 82 36.6


User provided reference genes

Program Settings