Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.7e-85 319.3 164 100.0
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 7.7e-62 240.7 132 88.6
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 2.9e-61 238.8 135 86.7
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 5.0e-61 238.0 135 86.7
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 6.1e-59 231.1 126 93.7
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.8e-58 229.6 135 84.4
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 5.2e-58 228.0 132 82.6
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 3.4e-57 225.3 132 81.1
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 5.7e-57 224.6 134 79.1
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 2.4e-55 219.2 132 78.8
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 2.4e-55 219.2 132 81.8
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 2.4e-55 219.2 135 77.0
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 7.0e-55 217.6 132 78.8
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 9.1e-55 217.2 132 78.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 1.6e-54 216.5 132 78.8
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 2.0e-54 216.1 132 78.8
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 2.0e-54 216.1 136 75.0
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 2.7e-54 215.7 135 75.6
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 2.7e-54 215.7 132 78.0
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 2.7e-54 215.7 132 77.3
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 2.7e-54 215.7 132 78.0
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 4.5e-54 214.9 135 76.3
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 7.7e-54 214.2 132 75.8
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 7.7e-54 214.2 136 75.0
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 1.7e-53 213.0 132 78.8
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 2.3e-53 212.6 132 77.3
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 2.3e-53 212.6 133 76.7
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 6.5e-53 211.1 134 75.4
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 8.6e-53 210.7 132 76.5
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 3.3e-52 208.8 132 74.2
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.2e-52 208.4 132 79.5
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 5.5e-52 208.0 138 77.5
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 7.2e-52 207.6 132 76.5
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 7.2e-52 207.6 132 76.5
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 9.5e-52 207.2 132 75.8
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 1.6e-51 206.5 132 75.0
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 1.6e-51 206.5 132 75.8
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 6.1e-51 204.5 134 73.9
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 6.1e-51 204.5 132 77.3
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.0e-50 203.8 132 74.2
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 1.0e-50 203.8 132 77.3
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 1.4e-50 203.4 132 75.0
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.8e-50 203.0 132 74.2
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.8e-50 203.0 132 75.8
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 2.3e-50 202.6 136 72.1
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 3.0e-50 202.2 132 77.3
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 3.0e-50 202.2 131 74.8
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 3.0e-50 202.2 132 73.5
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 5.2e-50 201.4 131 77.1
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 5.2e-50 201.4 128 75.8
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.2e-49 200.3 133 75.9
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 2.0e-49 199.5 132 73.5
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 2.0e-49 199.5 133 71.4
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 2.0e-49 199.5 132 72.7
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 4.4e-49 198.4 136 73.5
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 5.7e-49 198.0 136 74.3
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 7.5e-49 197.6 136 70.6
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 9.8e-49 197.2 130 77.7
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 9.8e-49 197.2 130 77.7
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 2.2e-48 196.1 132 72.7
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 2.2e-48 196.1 132 78.0
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 2.8e-48 195.7 133 70.7
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 3.7e-48 195.3 132 76.5
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 6.3e-48 194.5 132 74.2
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 6.3e-48 194.5 132 69.7
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 8.3e-48 194.1 132 70.5
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 8.3e-48 194.1 132 74.2
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.4e-47 193.4 132 70.5
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 1.4e-47 193.4 132 71.2
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.4e-47 193.4 137 68.6
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 1.8e-47 193.0 131 70.2
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.8e-47 193.0 132 72.0
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 2.4e-47 192.6 132 68.9
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 3.1e-47 192.2 132 68.9
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 3.1e-47 192.2 132 75.8
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 3.1e-47 192.2 131 70.2
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 4.1e-47 191.8 132 70.5
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 4.1e-47 191.8 132 72.7
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.1e-47 191.8 137 67.9
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 5.4e-47 191.4 132 67.4
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 5.4e-47 191.4 137 67.9
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 7.0e-47 191.0 135 69.6
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.2e-46 190.3 132 68.2
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 1.2e-46 190.3 132 72.0
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 1.6e-46 189.9 132 68.2
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 2.7e-46 189.1 132 67.4
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 3.5e-46 188.7 136 70.6
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 4.5e-46 188.3 132 67.4
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 4.5e-46 188.3 133 66.9
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 2.9e-45 185.7 132 65.2
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 3.8e-45 185.3 126 71.4
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 3.8e-45 185.3 133 69.2
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 5.0e-45 184.9 137 65.7
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 6.6e-45 184.5 132 65.2
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.5e-44 183.3 135 69.6
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 2.8e-43 179.1 132 64.4
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 1.8e-42 176.4 132 62.9
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.0e-42 175.3 132 68.9
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 4.4e-41 171.8 131 64.1
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.7e-40 169.9 132 68.9
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 2.2e-40 169.5 132 68.2
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 1.2e-38 163.7 119 63.9
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 3.5e-38 162.2 133 61.7
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 4.6e-38 161.8 133 61.7
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 4.6e-38 161.8 133 61.7
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 3.9e-37 158.7 132 57.6
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 5.0e-37 158.3 133 60.2
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 2.5e-36 156.0 132 61.4
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.6e-35 153.3 132 57.6
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 2.1e-35 152.9 131 58.0
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.1e-34 150.6 131 58.0
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 1.1e-34 150.6 132 56.1
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 3.1e-34 149.1 130 53.8
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 4.0e-34 148.7 94 75.5
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 5.8e-33 144.8 129 56.6
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 8.3e-32 141.0 97 69.1
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 3.3e-28 129.0 135 51.9
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 7.3e-28 127.9 132 51.5
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.2e-27 127.1 82 75.6
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 6.2e-27 124.8 135 51.9
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 3.1e-26 122.5 96 60.4
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.7e-24 116.7 69 76.8
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 4.9e-24 115.2 136 46.3
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 6.4e-24 114.8 88 65.9
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 1.4e-18 97.1 68 64.7
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 8.9e-18 94.4 71 67.6
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 8.4e-16 87.8 95 47.4
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.9e-07 60.1 34 79.4


User provided reference genes

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