Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007035 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 1.4e-128 463.0 234 100.0
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 3.5e-76 288.9 257 63.0
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 3.9e-75 285.4 255 63.1
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 7.4e-74 281.2 259 61.8
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 1.1e-69 267.3 274 62.0
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 1.3e-59 233.8 257 55.3
Hma1.2p1_1423F.1_g282650 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 4.8e-57 225.3 235 56.2
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 1.2e-55 220.7 257 50.2
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 5.9e-55 218.4 261 52.9
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 1.3e-54 217.2 250 51.6
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 3.6e-52 209.1 240 50.4
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 4.6e-52 208.8 231 51.1
Cfa016931 Carpinus fangiana HOM05D000306 ORTHO05D005993 6.1e-52 208.4 252 48.4
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 2.3e-51 206.5 221 54.8
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 3.9e-51 205.7 251 48.2
Cc06_g13480 Coffea canephora HOM05D000306 ORTHO05D005993 5.1e-51 205.3 227 49.8
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 5.1e-51 205.3 253 47.0
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 8.7e-51 204.5 232 51.3
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 1.1e-50 204.1 212 51.4
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 3.3e-50 202.6 276 46.7
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 4.3e-50 202.2 239 49.4
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 4.3e-50 202.2 239 49.0
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 5.7e-50 201.8 254 46.1
Haze_22119 Corylus avellana HOM05D000306 ORTHO05D005993 7.4e-50 201.4 234 49.1
SalBow6G4076 Salvia bowleyana HOM05D000306 ORTHO05D005993 9.7e-50 201.1 260 46.2
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 6.3e-49 198.4 248 48.0
Hma1.2p1_1022F.1_g248750 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 2.4e-48 196.4 172 64.0
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 3.1e-48 196.1 257 49.4
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 1.2e-47 194.1 216 48.1
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 4.5e-47 192.2 236 47.9
Nitab4.5_0000937g0040 Nicotiana tabacum HOM05D000306 ORTHO05D005993 5.9e-47 191.8 232 48.7
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 7.7e-47 191.4 235 48.9
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 1.0e-46 191.0 271 45.0
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 2.9e-46 189.5 253 46.2
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 1.2e-44 184.1 259 45.6
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 1.0e-43 181.0 257 44.7
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 1.8e-43 180.3 214 48.6
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 2.3e-43 179.9 228 47.4
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 3.0e-43 179.5 216 47.7
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 6.7e-43 178.3 243 47.3
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 3.3e-42 176.0 215 47.0
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 5.7e-42 175.3 227 47.1
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 5.7e-42 175.3 235 45.1
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 5.7e-42 175.3 214 48.1
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 7.4e-42 174.9 215 47.0
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 1.3e-41 174.1 238 44.5
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 1.7e-41 173.7 213 47.9
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 3.1e-40 169.5 232 45.3
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 4.1e-40 169.1 222 45.9
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 6.9e-40 168.3 226 44.2
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 5.9e-39 165.2 243 44.0
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 1.0e-38 164.5 235 45.1
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 1.3e-38 164.1 234 44.4
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 3.8e-38 162.5 321 37.4
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 1.1e-37 161.0 211 46.4
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 1.4e-37 160.6 213 43.2
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 4.2e-37 159.1 242 43.0
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 5.5e-37 158.7 234 44.0
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 5.5e-37 158.7 234 44.4
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 7.2e-37 158.3 231 43.3
SEGI_35821 Sequoiadendron giganteum HOM05D000306 ORTHO05D005993 9.4e-37 157.9 211 44.1
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 1.2e-36 157.5 233 41.2
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 1.6e-36 157.1 231 43.3
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 2.1e-36 156.8 263 39.5
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 2.7e-36 156.4 261 42.1
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 2.7e-36 156.4 238 41.2
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 6.1e-36 155.2 234 43.2
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 7.9e-36 154.8 238 41.2
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 7.9e-36 154.8 259 39.8
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 1.0e-35 154.5 259 41.7
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 1.0e-35 154.5 232 41.4
CARHR271360 Cardamine hirsuta HOM05D000306 ORTHO05D005993 1.8e-35 153.7 260 39.2
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 1.8e-35 153.7 253 40.3
EL10Ac8g18271 Beta vulgaris HOM05D000306 ORTHO05D005993 6.7e-35 151.8 236 41.1
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 6.7e-35 151.8 225 44.0
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 1.1e-34 151.0 210 42.4
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 1.5e-34 150.6 244 40.2
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 2.6e-34 149.8 215 43.7
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 2.6e-34 149.8 238 41.6
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 7.4e-34 148.3 216 42.6
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 9.7e-34 147.9 256 39.5
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 9.7e-34 147.9 256 39.5
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 2.8e-33 146.4 258 39.5
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 2.8e-33 146.4 231 42.9
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 3.7e-33 146.0 265 37.7
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 3.7e-33 146.0 222 41.4
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 6.3e-33 145.2 229 42.8
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 1.1e-32 144.4 264 39.8
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.1e-32 144.4 107 71.0
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 1.8e-32 143.7 244 40.6
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 2.4e-32 143.3 262 37.4
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 2.4e-32 143.3 256 38.7
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 3.1e-32 142.9 262 37.4
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 3.1e-32 142.9 262 37.4
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 4.1e-32 142.5 218 40.4
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 4.5e-31 139.0 256 38.3
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 4.5e-31 139.0 264 39.0
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 2.2e-30 136.7 253 37.2
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 2.7e-28 129.8 250 36.8
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 7.5e-26 121.7 108 61.1
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 4.1e-24 115.9 220 37.3
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 2.5e-21 106.7 213 34.3
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 1.2e-20 104.4 92 62.0
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 2.3e-19 100.1 218 35.3
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 6.3e-17 92.0 249 30.5
Hma1.2p1_0863F.1_g230000 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.1e-16 91.3 68 70.6
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 2.9e-14 83.2 220 33.2
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 1.2e-12 77.8 71 57.7
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 5.7e-10 68.9 239 27.6


User provided reference genes

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