Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006848 Camellia sinensis var. sinensis HOM05D005554 ORTHO05D007823 3.7e-44 181.0 84 100.0
CSS0044545 Camellia sinensis var. sinensis HOM05D005554 ORTHO05D007823 1.3e-41 172.6 83 95.2
Dinv38934 Davidia involucrata HOM05D005554 ORTHO05D007823 6.6e-41 170.2 83 92.8
Nn6g33413 Nelumbo nucifera HOM05D005554 ORTHO05D007823 2.5e-40 168.3 83 90.4
Potri.001G103300 Populus trichocarpa HOM05D005554 ORTHO05D007823 9.5e-40 166.4 83 90.4
Glyma.05G208600 Glycine max HOM05D005554 ORTHO05D007823 1.2e-39 166.0 83 89.2
Glyma.05G208921 Glycine max HOM05D005554 ORTHO05D007823 1.2e-39 166.0 83 89.2
Nitab4.5_0010813g0010 Nicotiana tabacum HOM05D005554 ORTHO05D007823 1.2e-39 166.0 83 90.4
SalBow1G4020 Salvia bowleyana HOM05D005554 ORTHO05D007823 1.2e-39 166.0 83 90.4
Cc08_g14820 Coffea canephora HOM05D005554 ORTHO05D007823 1.6e-39 165.6 83 90.4
Prupe.5G101100 Prunus persica HOM05D005554 ORTHO05D007823 1.6e-39 165.6 83 90.4
CDE05G1777 Ceratophyllum demersum HOM05D005554 ORTHO05D007823 2.1e-39 165.2 83 89.2
Glyma.08G015200 Glycine max HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 89.2
Gohir.A12G229900 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 89.2
Gohir.D12G231000 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 89.2
Gorai.008G247200 Gossypium raimondii HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 89.2
RcHm_v2.0_Chr7g0197491 Rosa chinensis HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 88.0
TAR375G0921 Trochodendron aralioides HOM05D005554 ORTHO05D007823 2.8e-39 164.9 83 90.4
Nitab4.5_0001615g0110 Nicotiana tabacum HOM05D005554 ORTHO05D007823 3.6e-39 164.5 83 89.2
Oeu064085.1 Olea europaea HOM05D005554 ORTHO05D007823 3.6e-39 164.5 83 90.4
Actinidia14567 Actinidia chinensis HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 89.2
arahy.Tifrunner.gnm1.ann1.C4WXPV Arachis hypogaea HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 88.0
arahy.Tifrunner.gnm1.ann1.CVD0A8 Arachis hypogaea HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 88.0
AUR62003173 Chenopodium quinoa HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 89.2
Eucgr.D01840 Eucalyptus grandis HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 89.2
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 4.7e-39 164.1 83 89.2
COL.COLO4_34475 Corchorus olitorius HOM05D005554 ORTHO05D007823 6.1e-39 163.7 83 89.2
Thecc.03G279900 Theobroma cacao HOM05D005554 ORTHO05D007823 6.1e-39 163.7 83 88.0
Aqoxy7G00299 Aquilegia oxysepala HOM05D005554 ORTHO05D007823 8.0e-39 163.3 83 90.4
Medtr8g098345 Medicago truncatula HOM05D005554 ORTHO05D007823 8.0e-39 163.3 83 86.7
PGR031G2745 Punica granatum HOM05D005554 ORTHO05D007823 8.0e-39 163.3 83 89.2
QL12p032791 Quercus lobata HOM05D005554 ORTHO05D007823 8.0e-39 163.3 83 89.2
Atru.chr9.2175 Acer truncatum HOM05D005554 ORTHO05D007823 1.0e-38 162.9 83 88.0
unitig_26.g9706 Utricularia gibba HOM05D005554 ORTHO05D007823 1.0e-38 162.9 83 89.2
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 1.4e-38 162.5 83 89.2
VMungo0251G0638 Vigna mungo HOM05D005554 ORTHO05D007823 1.4e-38 162.5 83 88.0
Ah.10g034840 Amaranthus hybridus HOM05D005554 ORTHO05D007823 1.8e-38 162.2 83 88.0
CAN.G774.53 Capsicum annuum HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 88.0
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 86.7
CiPaw.12G092300 Carya illinoinensis HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 86.7
AUR62007990 Chenopodium quinoa HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 88.0
Ciclev10018956m.g Citrus clementina HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 89.2
Duzib205G0518 Durio zibethinus HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 88.0
FAN04G0002 Fragaria x ananassa HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 85.5
FAN08G3292 Fragaria x ananassa HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 85.5
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 85.5
Lalb_Chr05g0224711 Lupinus albus HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 88.0
Manes.02G019800 Manihot esculenta HOM05D005554 ORTHO05D007823 2.3e-38 161.8 83 88.0
Lj2C0T8 Lonicera japonica HOM05D005554 ORTHO05D007823 3.0e-38 161.4 83 86.7
Lj2C185T6 Lonicera japonica HOM05D005554 ORTHO05D007823 3.0e-38 161.4 83 86.7
ATR0680G162 Amborella trichopoda HOM05D005554 ORTHO05D007823 4.0e-38 161.0 83 88.0
MELO3C005683.2 Cucumis melo HOM05D005554 ORTHO05D007823 4.0e-38 161.0 83 86.7
THA.LOC104823588 Tarenaya hassleriana HOM05D005554 ORTHO05D007823 4.0e-38 161.0 83 88.0
TWI15G0555 Tripterygium wilfordii HOM05D005554 ORTHO05D007823 4.0e-38 161.0 83 86.7
GSVIVG01019746001 Vitis vinifera HOM05D005554 ORTHO05D007823 4.0e-38 161.0 83 88.0
Ca_17525_v3 Cicer arietinum L. HOM05D005554 ORTHO05D007823 5.2e-38 160.6 83 86.7
Phvul.002G290300 Phaseolus vulgaris HOM05D005554 ORTHO05D007823 5.2e-38 160.6 83 86.7
MSTRG.13839 Avicennia marina HOM05D005554 ORTHO05D007823 6.8e-38 160.2 83 86.7
FAN18G3000 Fragaria x ananassa HOM05D005554 ORTHO05D007823 6.8e-38 160.2 83 84.3
MD06G1085100 Malus domestica HOM05D005554 ORTHO05D007823 8.9e-38 159.8 83 88.0
PSO478G3044 Papaver somniferum HOM05D005554 ORTHO05D007823 8.9e-38 159.8 83 85.5
PSO782G1990 Papaver somniferum HOM05D005554 ORTHO05D007823 8.9e-38 159.8 83 85.5
TPR.G12960 Trifolium pratense HOM05D005554 ORTHO05D007823 1.5e-37 159.1 83 83.1
Thhalv10023292m.g Eutrema salsugineum HOM05D005554 ORTHO05D007823 2.0e-37 158.7 83 84.3
Psat7g032760 Pisum sativum HOM05D005554 ORTHO05D007823 2.0e-37 158.7 83 83.1
Sp2g00970 Schrenkiella parvula HOM05D005554 ORTHO05D007823 2.0e-37 158.7 83 84.3
BcaB07g31556 Brassica carinata HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
BcaC04g22690 Brassica carinata HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
A09p13810 Brassica napus HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
C09p16520 Brassica napus HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
BolC9t54561H Brassica oleracea HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
BraA09t37033Z Brassica rapa HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 83.1
MBI18_g45367_MAGBIO Magnolia biondii HOM05D005554 ORTHO05D007823 2.6e-37 158.3 83 86.7
Lj4g0004686 Lotus japonicus HOM05D005554 ORTHO05D007823 3.4e-37 157.9 83 83.1
Aa31LG2G890 Aethionema arabicum HOM05D005554 ORTHO05D007823 4.4e-37 157.5 83 84.3
Carub.0002s0117 Capsella rubella HOM05D005554 ORTHO05D007823 4.4e-37 157.5 83 83.1
Migut.E01089 Erythranthe guttata HOM05D005554 ORTHO05D007823 4.4e-37 157.5 83 85.5
Sc01g0009640 Simmondsia chinensis HOM05D005554 ORTHO05D007823 4.4e-37 157.5 83 84.3
AL2G11550 Arabidopsis lyrata HOM05D005554 ORTHO05D007823 5.7e-37 157.1 83 83.1
CsaV3_5G002730 Cucumis sativus L. HOM05D005554 ORTHO05D007823 5.7e-37 157.1 83 84.3
DCAR_000617 Daucus carota HOM05D005554 ORTHO05D007823 5.7e-37 157.1 83 86.7
Os10g0548900 Oryza sativa ssp. japonica HOM05D005554 ORTHO05D007823 7.5e-37 156.8 83 83.1
Solyc08g081170.4 Solanum lycopersicum HOM05D005554 ORTHO05D007823 7.5e-37 156.8 83 83.1
Sopen08g029470 Solanum pennellii HOM05D005554 ORTHO05D007823 7.5e-37 156.8 83 83.1
PGSC0003DMG402012338 Solanum tuberosum HOM05D005554 ORTHO05D007823 7.5e-37 156.8 83 83.1
Zm00001eb391750 Zea mays HOM05D005554 ORTHO05D007823 7.5e-37 156.8 83 83.1
AT1G63680 Arabidopsis thaliana HOM05D005554 ORTHO05D007823 1.3e-36 156.0 83 81.9
CANSAT21G2493 Cannabis sativa HOM05D005554 ORTHO05D007823 1.7e-36 155.6 83 86.7
Hund14815 Selenicereus undatus HOM05D005554 ORTHO05D007823 3.7e-36 154.5 83 84.3
Sabra01G0078000 Salix brachista HOM05D005554 ORTHO05D007823 4.9e-36 154.1 103 71.8
HPP92_008494 Vanilla planifolia HOM05D005554 ORTHO05D007823 8.3e-36 153.3 83 83.1
CARHR047660 Cardamine hirsuta HOM05D005554 ORTHO05D007823 2.4e-35 151.8 83 81.9
EL10Ac6g14928 Beta vulgaris HOM05D005554 ORTHO05D007823 4.1e-35 151.0 83 83.1
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 7.0e-35 150.2 78 84.6
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 2.0e-34 148.7 83 79.5
ECA246G2370 Erigeron canadensis HOM05D005554 ORTHO05D007823 1.0e-33 146.4 83 78.3
Lsat_1_v5_gn_3_6620 Lactuca sativa HOM05D005554 ORTHO05D007823 3.9e-33 144.4 83 77.1
Gohir.A03G016800 Gossypium hirsutum HOM05D005554 ORTHO05D007823 5.0e-33 144.1 83 77.1
Gohir.D03G151100 Gossypium hirsutum HOM05D005554 ORTHO05D007823 6.6e-33 143.7 83 75.9
Gorai.003G158300 Gossypium raimondii HOM05D005554 ORTHO05D007823 2.5e-32 141.7 83 73.5
Mapoly0091s0082 Marchantia polymorpha HOM05D005554 ORTHO05D007823 3.3e-32 141.4 83 74.7
HanXRQChr06g0165871 Helianthus annuus HOM05D005554 ORTHO05D007823 1.2e-31 139.4 83 77.1
Pp3c24_18820 Physcomitrium patens HOM05D005554 ORTHO05D007823 1.6e-31 139.0 83 72.3
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 3.6e-31 137.9 83 71.1
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 8.0e-31 136.7 83 71.1
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 8.9e-30 133.3 83 67.5
Oeu007749.1 Olea europaea HOM05D005554 ORTHO05D007823 1.5e-29 132.5 84 78.6
SGA_v2.0_scaffold144G35937 Striga asiatica HOM05D005554 ORTHO05D007823 5.4e-27 124.0 71 76.1
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 7.0e-27 123.6 83 63.9
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 8.6e-25 116.7 83 65.1
HPP92_020853 Vanilla planifolia HOM05D005554 ORTHO05D007823 1.1e-24 116.3 83 61.4
ClCG01G002630 Citrullus lanatus HOM05D005554 ORTHO05D007823 2.6e-21 105.1 54 83.3
FvH4_5g02610 Fragaria vesca HOM05D005554 ORTHO05D007823 5.8e-21 104.0 54 79.6
MD14G1106300 Malus domestica HOM05D005554 ORTHO05D007823 3.7e-20 101.3 54 81.5
SEGI_34096 Sequoiadendron giganteum HOM05D005554 ORTHO05D007823 3.5e-18 94.7 54 75.9
Sed0016596 Sechium edule HOM05D005554 ORTHO05D007823 4.6e-18 94.4 47 85.1
Actinidia02000 Actinidia chinensis HOM05D005554 ORTHO05D007823 1.6e-07 59.3 30 73.3
MCO12G378 Micromonas commoda HOM05D005554 ORTHO05D007823 3.1e-06 55.1 48 54.2


User provided reference genes

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